RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 RC3H1Q5TC82 1133 aaKnown RBP8.08□□□□□ -1.12
PSMC6-219ENST00000612399 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
PSMC6-219ENST00000612399 ANTXR1Q9H6X2 564 aa8.08□□□□□ -1.12
PSMC6-219ENST00000612399 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
PSMC6-219ENST00000612399 PTPRMP28827 1452 aa8.08□□□□□ -1.12
PSMC6-219ENST00000612399 TESPA1A2RU30 521 aaPredicted RBP8.07□□□□□ -1.12
PSMC6-219ENST00000612399 GOLGA6L3A6NEY3 463 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 SKAP1Q86WV1 359 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 WDR63Q8IWG1 891 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 NPAS3Q8IXF0 933 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 RWDD1Q9H446 243 aaPredicted RBP8.07□□□□□ -1.12
PSMC6-219ENST00000612399 NXF1Q9UBU9 619 aaKnown RBP8.07□□□□□ -1.12
PSMC6-219ENST00000612399 YEATS2Q9ULM3 1422 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 NRXN1Q9ULB1 1477 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 ADGRB2O60241 1585 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 REREQ9P2R6 1566 aa8.07□□□□□ -1.12
PSMC6-219ENST00000612399 APAF1O14727 1248 aa8.06□□□□□ -1.12
PSMC6-219ENST00000612399 POGZQ7Z3K3 1410 aa8.06□□□□□ -1.12
PSMC6-219ENST00000612399 FSD2A1L4K1 749 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 EIF5BO60841 1220 aaKnown RBP8.05□□□□□ -1.12
PSMC6-219ENST00000612399 CLCN1P35523 988 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 VSIG10Q8N0Z9 540 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 PHOX2BQ99453 314 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 CHMP5Q9NZZ3 219 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 NSD2O96028 1365 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 RIMS1Q86UR5 1692 aaKnown RBP8.05□□□□□ -1.12
PSMC6-219ENST00000612399 BCAR3O75815 825 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 IGHDP01880 384 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 MRE11P49959 708 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 SKOR1P84550 965 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 WWC1Q8IX03 1113 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 CCDC24Q8N4L8 307 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 IRF7Q92985 503 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 POGKQ9P215 609 aa8.05□□□□□ -1.12
PSMC6-219ENST00000612399 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
PSMC6-219ENST00000612399 EFCAB2Q5VUJ9 269 aa8.04□□□□□ -1.12
PSMC6-219ENST00000612399 MYH16Q9H6N6 1097 aa8.04□□□□□ -1.12
PSMC6-219ENST00000612399 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 CD46P15529 392 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 MCM4P33991 863 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 GMPRP36959 345 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 RARSP54136 660 aaKnown RBP8.03□□□□□ -1.12
PSMC6-219ENST00000612399 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
PSMC6-219ENST00000612399 TBC1D2Q9BYX2 928 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 QRICH2Q9H0J4 1663 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 EFCAB6Q5THR3 1501 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 LMTK2Q8IWU2 1503 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 ZNF518AQ6AHZ1 1483 aa8.03□□□□□ -1.12
PSMC6-219ENST00000612399 KDM4AO75164 1064 aa8.02□□□□□ -1.13
PSMC6-219ENST00000612399 USP46P62068 366 aa8.02□□□□□ -1.13
PSMC6-219ENST00000612399 SKOR2Q2VWA4 1001 aaPredicted RBP8.02□□□□□ -1.13
PSMC6-219ENST00000612399 CCDC146Q8IYE0 955 aa8.02□□□□□ -1.13
PSMC6-219ENST00000612399 CFAP53Q96M91 514 aa8.02□□□□□ -1.13
PSMC6-219ENST00000612399 PNNQ9H307 717 aaKnown RBP8.02□□□□□ -1.13
PSMC6-219ENST00000612399 ATP7AQ04656 1500 aa8.02□□□□□ -1.13
PSMC6-219ENST00000612399 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
PSMC6-219ENST00000612399 RRP9O43818 475 aaKnown RBP8.01□□□□□ -1.13
PSMC6-219ENST00000612399 SLKQ9H2G2 1235 aaPredicted RBP8.01□□□□□ -1.13
PSMC6-219ENST00000612399 COG6Q9Y2V7 657 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 ADGRB3O60242 1522 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 FER1L4A9Z1Z3 1794 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
PSMC6-219ENST00000612399 HDAC1Q13547 482 aaPredicted RBP8.01□□□□□ -1.13
PSMC6-219ENST00000612399 MVPQ14764 893 aaKnown RBP8.01□□□□□ -1.13
PSMC6-219ENST00000612399 HSCBQ8IWL3 235 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 PANK1Q8TE04 598 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 SNX21Q969T3 373 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 LMTK3Q96Q04 1460 aa8.01□□□□□ -1.13
PSMC6-219ENST00000612399 ABCC11Q96J66 1382 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 XRCC6P12956 609 aaKnown RBP eCLIP8□□□□□ -1.13
PSMC6-219ENST00000612399 MLECQ14165 292 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 ZKSCAN2Q63HK3 967 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 TRIM46Q7Z4K8 759 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 AFAP1Q8N556 730 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 C22orf23Q9BZE7 217 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
PSMC6-219ENST00000612399 DDX19BQ9UMR2 479 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 MROH1Q8NDA8 1641 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 PPLO60437 1756 aa8□□□□□ -1.13
PSMC6-219ENST00000612399 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
PSMC6-219ENST00000612399 ANKRD26Q9UPS8 1709 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 SPAG9O60271 1321 aaKnown RBP7.99□□□□□ -1.13
PSMC6-219ENST00000612399 MROH2AA6NES4 1674 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 H3BM21 787 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
PSMC6-219ENST00000612399 JUNDP17535 347 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 GBP4Q96PP9 640 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 RRAGDQ9NQL2 400 aaPredicted RBP7.99□□□□□ -1.13
PSMC6-219ENST00000612399 WASF2Q9Y6W5 498 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 NSD3Q9BZ95 1437 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 TRAPPC8Q9Y2L5 1435 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 DIP2CQ9Y2E4 1556 aa7.99□□□□□ -1.13
PSMC6-219ENST00000612399 IL16Q14005 1332 aa7.98□□□□□ -1.13
PSMC6-219ENST00000612399 TRAK2O60296 914 aa7.98□□□□□ -1.13
PSMC6-219ENST00000612399 RBM25P49756 843 aaKnown RBP7.98□□□□□ -1.13
PSMC6-219ENST00000612399 MORC1Q86VD1 984 aa7.98□□□□□ -1.13
PSMC6-219ENST00000612399 SIAH2O43255 324 aa7.97□□□□□ -1.13
PSMC6-219ENST00000612399 HSP90AA1P07900 732 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms