RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 IL16Q14005 1332 aa24.33■■□□□ 1.49
SMAD6-205ENST00000612349 LDHCP07864 332 aa24.32■■□□□ 1.48
SMAD6-205ENST00000612349 SCAND2PQ9GZW5 306 aaPredicted RBP24.32■■□□□ 1.48
SMAD6-205ENST00000612349 DESP17661 470 aa24.32■■□□□ 1.48
SMAD6-205ENST00000612349 ZNF213O14771 459 aa24.32■■□□□ 1.48
SMAD6-205ENST00000612349 CCDC181Q5TID7 509 aa24.32■■□□□ 1.48
SMAD6-205ENST00000612349 MCM4P33991 863 aa24.31■■□□□ 1.48
SMAD6-205ENST00000612349 TTC21AQ8NDW8 1320 aa24.31■■□□□ 1.48
SMAD6-205ENST00000612349 PPP1R12BO60237 982 aaPredicted RBP24.31■■□□□ 1.48
SMAD6-205ENST00000612349 A2MP01023 1474 aa24.31■■□□□ 1.48
SMAD6-205ENST00000612349 SMARCA5O60264 1052 aaPredicted RBP24.31■■□□□ 1.48
SMAD6-205ENST00000612349 TTF1Q15361 905 aaPredicted RBP24.31■■□□□ 1.48
SMAD6-205ENST00000612349 CCDC8Q9H0W5 538 aaPredicted RBP24.31■■□□□ 1.48
SMAD6-205ENST00000612349 RAB34Q9BZG1 259 aa24.31■■□□□ 1.48
SMAD6-205ENST00000612349 ECHDC1Q9NTX5 307 aa24.31■■□□□ 1.48
SMAD6-205ENST00000612349 CWC25Q9NXE8 425 aaPredicted RBP24.31■■□□□ 1.48
SMAD6-205ENST00000612349 MAP3K11Q16584 847 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 C20orf194Q5TEA3 1177 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 PLEKHH1Q9ULM0 1364 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 PIBF1Q8WXW3 757 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 PIK3R4Q99570 1358 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 PTPRKQ15262 1439 aa24.3■■□□□ 1.48
SMAD6-205ENST00000612349 SNRPA1P09661 255 aaKnown RBP24.29■■□□□ 1.48
SMAD6-205ENST00000612349 CCDC83Q8IWF9 413 aa24.29■■□□□ 1.48
SMAD6-205ENST00000612349 EVI5LQ96CN4 794 aa24.29■■□□□ 1.48
SMAD6-205ENST00000612349 ZBTB3Q9H5J0 574 aa24.29■■□□□ 1.48
SMAD6-205ENST00000612349 ANKRD24Q8TF21 1146 aa24.29■■□□□ 1.48
SMAD6-205ENST00000612349 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
SMAD6-205ENST00000612349 C8orf76Q96K31 380 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 UHRF1BP1LA0JNW5 1464 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 LDHAL6AQ6ZMR3 332 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 FBXO3Q9UK99 471 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 DUOX2Q9NRD8 1548 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 SLC12A7Q9Y666 1083 aa24.28■■□□□ 1.48
SMAD6-205ENST00000612349 RANBP6O60518 1105 aaKnown RBP24.27■■□□□ 1.48
SMAD6-205ENST00000612349 EIF5P55010 431 aaKnown RBP24.27■■□□□ 1.48
SMAD6-205ENST00000612349 TEX14Q8IWB6 1497 aa24.27■■□□□ 1.48
SMAD6-205ENST00000612349 TRIM21P19474 475 aaKnown RBP24.27■■□□□ 1.48
SMAD6-205ENST00000612349 GRPEL1Q9HAV7 217 aa24.27■■□□□ 1.48
SMAD6-205ENST00000612349 MAP3K2Q9Y2U5 619 aa24.27■■□□□ 1.48
SMAD6-205ENST00000612349 TRIM27P14373 513 aa24.27■■□□□ 1.48
SMAD6-205ENST00000612349 MSH6P52701 1360 aa24.26■■□□□ 1.47
SMAD6-205ENST00000612349 GPTP24298 496 aa24.26■■□□□ 1.47
SMAD6-205ENST00000612349 IQCEQ6IPM2 695 aa24.26■■□□□ 1.47
SMAD6-205ENST00000612349 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
SMAD6-205ENST00000612349 CCDC112Q8NEF3 446 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 ZNF518AQ6AHZ1 1483 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 GOLGA6L10A6NI86 522 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 LIMCH1Q9UPQ0 1083 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 C6orf229H3BNL8 230 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 FERMT3Q86UX7 667 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 DNAI2Q9GZS0 605 aa24.25■■□□□ 1.47
SMAD6-205ENST00000612349 CUL5Q93034 780 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 CWC15Q9P013 229 aaKnown RBP24.24■■□□□ 1.47
SMAD6-205ENST00000612349 ERLIN1O75477 346 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 MATR3P43243 847 aaKnown RBP eCLIP24.24■■□□□ 1.47
SMAD6-205ENST00000612349 SYCP2Q9BX26 1530 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 SPTY2D1Q68D10 685 aaPredicted RBP24.24■■□□□ 1.47
SMAD6-205ENST00000612349 POTEJP0CG39 1038 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 PKNOX2Q96KN3 472 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 WDR7Q9Y4E6 1490 aa24.24■■□□□ 1.47
SMAD6-205ENST00000612349 IFIT3O14879 490 aaKnown RBP24.23■■□□□ 1.47
SMAD6-205ENST00000612349 BAG3O95817 575 aa24.23■■□□□ 1.47
SMAD6-205ENST00000612349 CCDC96Q2M329 555 aa24.23■■□□□ 1.47
SMAD6-205ENST00000612349 TMEM266Q2M3C6 531 aa24.23■■□□□ 1.47
SMAD6-205ENST00000612349 AXDND1Q5T1B0 1012 aaPredicted RBP24.23■■□□□ 1.47
SMAD6-205ENST00000612349 CATIPQ7Z7H3 387 aa24.23■■□□□ 1.47
SMAD6-205ENST00000612349 ZNF397Q8NF99 534 aaPredicted RBP24.23■■□□□ 1.47
SMAD6-205ENST00000612349 ANKRD18AQ8IVF6 992 aa24.23■■□□□ 1.47
SMAD6-205ENST00000612349 EHMT1Q9H9B1 1298 aa24.23■■□□□ 1.47
SMAD6-205ENST00000612349 EPB41L2O43491 1005 aaKnown RBP24.22■■□□□ 1.47
SMAD6-205ENST00000612349 KIF20AO95235 890 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 FBLN1P23142 703 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 SEPT11Q9NVA2 429 aaKnown RBP24.22■■□□□ 1.47
SMAD6-205ENST00000612349 PI4KAP2A4QPH2 592 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 NEFHP12036 1026 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 CHRNA2Q15822 529 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 PPP4R3AQ6IN85 833 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 PI4KAP1Q8N8J0 262 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 BCL11BQ9C0K0 894 aaPredicted RBP24.22■■□□□ 1.47
SMAD6-205ENST00000612349 TRAPPC8Q9Y2L5 1435 aa24.22■■□□□ 1.47
SMAD6-205ENST00000612349 UBE3BQ7Z3V4 1068 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 MBIPQ9NS73 344 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 CCDC194A0A1B0GVG4 234 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 ARHGAP45Q92619 1136 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 ANO10Q9NW15 660 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 CFAP100Q494V2 611 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 FILIP1Q7Z7B0 1213 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 CCDC12Q8WUD4 166 aaPredicted RBP24.21■■□□□ 1.47
SMAD6-205ENST00000612349 UQCRFS1P1P0C7P4 283 aa24.21■■□□□ 1.47
SMAD6-205ENST00000612349 GOLGA8AA7E2F4 631 aa24.2■■□□□ 1.47
SMAD6-205ENST00000612349 GOLGA8BA8MQT2 603 aa24.2■■□□□ 1.47
SMAD6-205ENST00000612349 ANKRD13DQ6ZTN6 518 aa24.2■■□□□ 1.46
SMAD6-205ENST00000612349 SSRP1Q08945 709 aaKnown RBP24.2■■□□□ 1.46
SMAD6-205ENST00000612349 ZRSR2Q15696 482 aaKnown RBP24.2■■□□□ 1.46
SMAD6-205ENST00000612349 TSG101Q99816 390 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms