RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 KCPQ6ZWJ8 1503 aa24.95■■□□□ 1.58
SRRM3-205ENST00000612155 PALLDQ8WX93 1383 aa24.93■■□□□ 1.58
SRRM3-205ENST00000612155 TRIM27P14373 513 aa24.93■■□□□ 1.58
SRRM3-205ENST00000612155 EIF2S2P20042 333 aaKnown RBP24.93■■□□□ 1.58
SRRM3-205ENST00000612155 FMNL2Q96PY5 1086 aa24.93■■□□□ 1.58
SRRM3-205ENST00000612155 VAMP4O75379 141 aa24.92■■□□□ 1.58
SRRM3-205ENST00000612155 GIGYF1O75420 1035 aaPredicted RBP24.92■■□□□ 1.58
SRRM3-205ENST00000612155 NOB1Q9ULX3 412 aaKnown RBP24.92■■□□□ 1.58
SRRM3-205ENST00000612155 UBR2Q8IWV8 1755 aa24.92■■□□□ 1.58
SRRM3-205ENST00000612155 MVPQ14764 893 aaKnown RBP24.91■■□□□ 1.58
SRRM3-205ENST00000612155 USP16Q9Y5T5 823 aa24.91■■□□□ 1.58
SRRM3-205ENST00000612155 PIP4K2AP48426 406 aaPredicted RBP24.91■■□□□ 1.58
SRRM3-205ENST00000612155 DZIP1LQ8IYY4 767 aaKnown RBP24.91■■□□□ 1.58
SRRM3-205ENST00000612155 C5P01031 1676 aa24.9■■□□□ 1.58
SRRM3-205ENST00000612155 HEG1Q9ULI3 1381 aa24.9■■□□□ 1.58
SRRM3-205ENST00000612155 APBA3O96018 575 aa24.89■■□□□ 1.58
SRRM3-205ENST00000612155 DNAJC10Q8IXB1 793 aa24.88■■□□□ 1.57
SRRM3-205ENST00000612155 LOC102724428A0A0B4J2F2 783 aa24.88■■□□□ 1.57
SRRM3-205ENST00000612155 SIK1P57059 783 aa24.88■■□□□ 1.57
SRRM3-205ENST00000612155 ATF7IPQ6VMQ6 1270 aa24.88■■□□□ 1.57
SRRM3-205ENST00000612155 SNRPA1P09661 255 aaKnown RBP24.87■■□□□ 1.57
SRRM3-205ENST00000612155 ATP6V1AP38606 617 aa24.87■■□□□ 1.57
SRRM3-205ENST00000612155 ANXA1P04083 346 aa24.87■■□□□ 1.57
SRRM3-205ENST00000612155 ALDH1L2Q3SY69 923 aa24.87■■□□□ 1.57
SRRM3-205ENST00000612155 ITPK1Q13572 414 aa24.86■■□□□ 1.57
SRRM3-205ENST00000612155 AAMPQ13685 434 aa24.86■■□□□ 1.57
SRRM3-205ENST00000612155 ILDR2Q71H61 639 aa24.86■■□□□ 1.57
SRRM3-205ENST00000612155 RGS3P49796 1198 aa24.86■■□□□ 1.57
SRRM3-205ENST00000612155 HDGFL1Q5TGJ6 251 aa24.86■■□□□ 1.57
SRRM3-205ENST00000612155 FTSJ3Q8IY81 847 aaKnown RBP24.86■■□□□ 1.57
SRRM3-205ENST00000612155 SMARCC1Q92922 1105 aaPredicted RBP24.86■■□□□ 1.57
SRRM3-205ENST00000612155 ANP32EQ9BTT0 268 aa24.86■■□□□ 1.57
SRRM3-205ENST00000612155 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
SRRM3-205ENST00000612155 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.56
SRRM3-205ENST00000612155 TMEM57Q8N5G2 664 aa24.83■■□□□ 1.56
SRRM3-205ENST00000612155 LRRC4BQ9NT99 713 aa24.83■■□□□ 1.56
SRRM3-205ENST00000612155 CCNL1Q9UK58 526 aaPredicted RBP24.83■■□□□ 1.56
SRRM3-205ENST00000612155 A1BGP04217 495 aa24.82■■□□□ 1.56
SRRM3-205ENST00000612155 PROSER3Q2NL68 480 aa24.82■■□□□ 1.56
SRRM3-205ENST00000612155 MRPL50Q8N5N7 158 aaKnown RBP24.82■■□□□ 1.56
SRRM3-205ENST00000612155 CHPF2Q9P2E5 772 aa24.82■■□□□ 1.56
SRRM3-205ENST00000612155 C8orf34Q49A92 452 aa24.81■■□□□ 1.56
SRRM3-205ENST00000612155 PROM2Q8N271 834 aa24.81■■□□□ 1.56
SRRM3-205ENST00000612155 TJP1Q07157 1748 aa24.81■■□□□ 1.56
SRRM3-205ENST00000612155 KIF16BQ96L93 1317 aa24.8■■□□□ 1.56
SRRM3-205ENST00000612155 EN1Q05925 392 aaPredicted RBP24.8■■□□□ 1.56
SRRM3-205ENST00000612155 DEFB132Q7Z7B7 95 aa24.8■■□□□ 1.56
SRRM3-205ENST00000612155 MYL6BP14649 208 aa24.8■■□□□ 1.56
SRRM3-205ENST00000612155 LINC00116Q8NCU8 138 aa24.8■■□□□ 1.56
SRRM3-205ENST00000612155 ANP32AP39687 249 aaKnown RBP24.79■■□□□ 1.56
SRRM3-205ENST00000612155 SMIM5Q71RC9 77 aa24.79■■□□□ 1.56
SRRM3-205ENST00000612155 ITPRIPQ8IWB1 547 aa24.79■■□□□ 1.56
SRRM3-205ENST00000612155 VSIG10Q8N0Z9 540 aa24.79■■□□□ 1.56
SRRM3-205ENST00000612155 ZNF428Q96B54 188 aa24.79■■□□□ 1.56
SRRM3-205ENST00000612155 LY75O60449 1722 aa24.79■■□□□ 1.56
SRRM3-205ENST00000612155 SLC4A2P04920 1241 aa24.78■■□□□ 1.56
SRRM3-205ENST00000612155 NPM2Q86SE8 214 aaKnown RBP24.78■■□□□ 1.56
SRRM3-205ENST00000612155 CYP19A1P11511 503 aaPredicted RBP24.78■■□□□ 1.56
SRRM3-205ENST00000612155 IPO9Q96P70 1041 aaKnown RBP24.78■■□□□ 1.56
SRRM3-205ENST00000612155 HOXB7P09629 217 aa24.77■■□□□ 1.56
SRRM3-205ENST00000612155 TXNRD1Q16881 649 aa24.77■■□□□ 1.56
SRRM3-205ENST00000612155 CCDC30Q5VVM6 783 aa24.77■■□□□ 1.56
SRRM3-205ENST00000612155 G2E3Q7L622 706 aa24.77■■□□□ 1.56
SRRM3-205ENST00000612155 ZNF330Q9Y3S2 320 aaPredicted RBP24.77■■□□□ 1.56
SRRM3-205ENST00000612155 EZH2Q15910 746 aaKnown RBP24.77■■□□□ 1.56
SRRM3-205ENST00000612155 PHAXQ9H814 394 aaKnown RBP24.77■■□□□ 1.56
SRRM3-205ENST00000612155 NBPF26B4DH59 902 aa24.76■■□□□ 1.55
SRRM3-205ENST00000612155 IPO8O15397 1037 aaKnown RBP24.76■■□□□ 1.55
SRRM3-205ENST00000612155 PDIA6Q15084 440 aa24.76■■□□□ 1.55
SRRM3-205ENST00000612155 NBPF14Q5TI25 921 aa24.76■■□□□ 1.55
SRRM3-205ENST00000612155 NBPF10Q6P3W6 841 aaKnown RBP24.76■■□□□ 1.55
SRRM3-205ENST00000612155 NBPF15Q8N660 670 aa24.76■■□□□ 1.55
SRRM3-205ENST00000612155 ERICH6Q7L0X2 663 aa24.76■■□□□ 1.55
SRRM3-205ENST00000612155 DDX19BQ9UMR2 479 aa24.76■■□□□ 1.55
SRRM3-205ENST00000612155 LAMB4A4D0S4 1761 aa24.75■■□□□ 1.55
SRRM3-205ENST00000612155 FAM161AQ3B820 660 aa24.75■■□□□ 1.55
SRRM3-205ENST00000612155 ZBTB1Q9Y2K1 713 aa24.75■■□□□ 1.55
SRRM3-205ENST00000612155 PLSCR1O15162 318 aa24.74■■□□□ 1.55
SRRM3-205ENST00000612155 CRKLP46109 303 aaKnown RBP24.74■■□□□ 1.55
SRRM3-205ENST00000612155 SF3B2Q13435 895 aaKnown RBP24.74■■□□□ 1.55
SRRM3-205ENST00000612155 STK31Q9BXU1 1019 aa24.74■■□□□ 1.55
SRRM3-205ENST00000612155 ZBTB40Q9NUA8 1239 aa24.74■■□□□ 1.55
SRRM3-205ENST00000612155 STARD3NLO95772 234 aa24.74■■□□□ 1.55
SRRM3-205ENST00000612155 RWDD1Q9H446 243 aaPredicted RBP24.73■■□□□ 1.55
SRRM3-205ENST00000612155 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
SRRM3-205ENST00000612155 MYH14Q7Z406 1995 aaKnown RBP24.73■■□□□ 1.55
SRRM3-205ENST00000612155 AIMP1Q12904 312 aaKnown RBP24.73■■□□□ 1.55
SRRM3-205ENST00000612155 INTS5Q6P9B9 1019 aaKnown RBP24.72■■□□□ 1.55
SRRM3-205ENST00000612155 TEX13AQ9BXU3 409 aaPredicted RBP24.72■■□□□ 1.55
SRRM3-205ENST00000612155 DBF4Q9UBU7 674 aaPredicted RBP24.71■■□□□ 1.55
SRRM3-205ENST00000612155 NOP58Q9Y2X3 529 aaKnown RBP24.71■■□□□ 1.55
SRRM3-205ENST00000612155 AMIGO3Q86WK7 504 aa24.71■■□□□ 1.55
SRRM3-205ENST00000612155 CAMKK2Q96RR4 588 aa24.71■■□□□ 1.55
SRRM3-205ENST00000612155 SOS1Q07889 1333 aaPredicted RBP24.71■■□□□ 1.55
SRRM3-205ENST00000612155 COL5A3P25940 1745 aaPredicted RBP24.7■■□□□ 1.54
SRRM3-205ENST00000612155 TAF1LQ8IZX4 1826 aa24.7■■□□□ 1.54
SRRM3-205ENST00000612155 ARHGAP45Q92619 1136 aa24.7■■□□□ 1.54
SRRM3-205ENST00000612155 UPF1Q92900 1129 aaKnown RBP eCLIP24.7■■□□□ 1.54
SRRM3-205ENST00000612155 ARXQ96QS3 562 aa24.7■■□□□ 1.54
SRRM3-205ENST00000612155 DDX21Q9NR30 783 aaKnown RBP eCLIP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms