RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
LMBR1-221ENST00000609774 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
LMBR1-221ENST00000609774 GPBP1L1Q9HC44 474 aaPredicted RBP9.7□□□□□ -0.86
LMBR1-221ENST00000609774 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
LMBR1-221ENST00000609774 FAM208AQ9UK61 1670 aaKnown RBP9.7□□□□□ -0.86
LMBR1-221ENST00000609774 CSB-PGBD3P0DP91 1061 aa9.69□□□□□ -0.86
LMBR1-221ENST00000609774 PPP2R1AP30153 589 aa9.69□□□□□ -0.86
LMBR1-221ENST00000609774 DNAJC5GQ8N7S2 189 aa9.69□□□□□ -0.86
LMBR1-221ENST00000609774 CICQ96RK0 1608 aaPredicted RBP9.69□□□□□ -0.86
LMBR1-221ENST00000609774 UPF2Q9HAU5 1272 aaKnown RBP9.69□□□□□ -0.86
LMBR1-221ENST00000609774 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
LMBR1-221ENST00000609774 VIRMAQ69YN4 1812 aaKnown RBP9.68□□□□□ -0.86
LMBR1-221ENST00000609774 LTN1O94822 1766 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 NSD2O96028 1365 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 E9PSI1 815 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 KIF3CO14782 793 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 PLIN1O60240 522 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 NBPF1Q3BBV0 1214 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
LMBR1-221ENST00000609774 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 ACSBG1Q96GR2 724 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
LMBR1-221ENST00000609774 EVC2Q86UK5 1308 aa9.67□□□□□ -0.86
LMBR1-221ENST00000609774 ZNF521Q96K83 1311 aa9.67□□□□□ -0.86
LMBR1-221ENST00000609774 APLP1P51693 650 aa9.67□□□□□ -0.86
LMBR1-221ENST00000609774 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
LMBR1-221ENST00000609774 SPOCK2Q92563 424 aa9.67□□□□□ -0.86
LMBR1-221ENST00000609774 TFCP2L1Q9NZI6 479 aa9.67□□□□□ -0.86
LMBR1-221ENST00000609774 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 ZBTB7CA1YPR0 619 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 FAM43AQ8N2R8 423 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 FLAD1Q8NFF5 587 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
LMBR1-221ENST00000609774 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.86
LMBR1-221ENST00000609774 PDAP1Q13442 181 aaKnown RBP9.65□□□□□ -0.86
LMBR1-221ENST00000609774 C8orf34Q49A92 452 aa9.65□□□□□ -0.86
LMBR1-221ENST00000609774 C3orf67Q6ZVT6 689 aa9.65□□□□□ -0.86
LMBR1-221ENST00000609774 COL23A1Q86Y22 540 aaPredicted RBP9.65□□□□□ -0.86
LMBR1-221ENST00000609774 TRMT2AQ8IZ69 625 aaKnown RBP9.65□□□□□ -0.86
LMBR1-221ENST00000609774 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
LMBR1-221ENST00000609774 SBNO2Q9Y2G9 1366 aa9.64□□□□□ -0.87
LMBR1-221ENST00000609774 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
LMBR1-221ENST00000609774 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
LMBR1-221ENST00000609774 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
LMBR1-221ENST00000609774 C5P01031 1676 aa9.64□□□□□ -0.87
LMBR1-221ENST00000609774 TOMM70O94826 608 aa9.63□□□□□ -0.87
LMBR1-221ENST00000609774 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
LMBR1-221ENST00000609774 FRAT1Q92837 279 aaPredicted RBP9.63□□□□□ -0.87
LMBR1-221ENST00000609774 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
LMBR1-221ENST00000609774 KIF13BQ9NQT8 1826 aa9.63□□□□□ -0.87
LMBR1-221ENST00000609774 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
LMBR1-221ENST00000609774 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
LMBR1-221ENST00000609774 WDR90Q96KV7 1748 aa9.62□□□□□ -0.87
LMBR1-221ENST00000609774 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-221ENST00000609774 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
LMBR1-221ENST00000609774 RGS3P49796 1198 aa9.61□□□□□ -0.87
LMBR1-221ENST00000609774 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
LMBR1-221ENST00000609774 IP6K1Q92551 441 aa9.61□□□□□ -0.87
LMBR1-221ENST00000609774 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-221ENST00000609774 CCNL1Q9UK58 526 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-221ENST00000609774 TOGARAM1Q9Y4F4 1720 aa9.61□□□□□ -0.87
LMBR1-221ENST00000609774 UBR3Q6ZT12 1888 aa9.61□□□□□ -0.87
LMBR1-221ENST00000609774 SNPHO15079 494 aa9.6□□□□□ -0.87
LMBR1-221ENST00000609774 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
LMBR1-221ENST00000609774 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
LMBR1-221ENST00000609774 PUS7Q96PZ0 661 aaKnown RBP9.6□□□□□ -0.87
LMBR1-221ENST00000609774 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
LMBR1-221ENST00000609774 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
LMBR1-221ENST00000609774 EDC4Q6P2E9 1401 aaKnown RBP9.59□□□□□ -0.87
LMBR1-221ENST00000609774 C10orf71Q711Q0 1435 aa9.59□□□□□ -0.87
LMBR1-221ENST00000609774 RWDD1Q9H446 243 aaPredicted RBP9.59□□□□□ -0.87
LMBR1-221ENST00000609774 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
LMBR1-221ENST00000609774 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
LMBR1-221ENST00000609774 NSD3Q9BZ95 1437 aa9.58□□□□□ -0.88
LMBR1-221ENST00000609774 PRELPP51888 382 aa9.58□□□□□ -0.88
LMBR1-221ENST00000609774 KCNQ4P56696 695 aa9.58□□□□□ -0.88
LMBR1-221ENST00000609774 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
LMBR1-221ENST00000609774 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
LMBR1-221ENST00000609774 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
LMBR1-221ENST00000609774 DDX54Q8TDD1 881 aaKnown RBP9.58□□□□□ -0.88
LMBR1-221ENST00000609774 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
LMBR1-221ENST00000609774 MAP2P11137 1827 aaKnown RBP9.58□□□□□ -0.88
LMBR1-221ENST00000609774 BRCA1P38398 1863 aaKnown RBP9.57□□□□□ -0.88
LMBR1-221ENST00000609774 APAF1O14727 1248 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 SOX12O15370 315 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 EIF5BO60841 1220 aaKnown RBP9.57□□□□□ -0.88
LMBR1-221ENST00000609774 FRAT2O75474 233 aaPredicted RBP9.57□□□□□ -0.88
LMBR1-221ENST00000609774 CT47B1P0C2W7 299 aaPredicted RBP9.57□□□□□ -0.88
LMBR1-221ENST00000609774 PTMSP20962 102 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 SLC4A3P48751 1232 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 EMP3P54852 163 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 NME9Q86XW9 330 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 WDR63Q8IWG1 891 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 CFAP53Q96M91 514 aa9.57□□□□□ -0.88
LMBR1-221ENST00000609774 ISY1Q9ULR0 285 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms