RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 STRCP1A6NGW2 1772 aa19.56■□□□□ 0.72
CTSA-214ENST00000606788 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
CTSA-214ENST00000606788 GSE1Q14687 1217 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 KAT6BQ8WYB5 2073 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 XAGE3Q8WTP9 111 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 SLC52A2Q9HAB3 445 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 BABAM1Q9NWV8 329 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
CTSA-214ENST00000606788 SPATA31A3Q5VYP0 1347 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 KDM4FA0A1W2PPD8 638 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 COPS6Q7L5N1 327 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 TTC5Q8N0Z6 440 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 LRRC37A3O60309 1634 aa19.55■□□□□ 0.72
CTSA-214ENST00000606788 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
CTSA-214ENST00000606788 CASC1Q6TDU7 716 aa19.54■□□□□ 0.72
CTSA-214ENST00000606788 USP26Q9BXU7 913 aa19.54■□□□□ 0.72
CTSA-214ENST00000606788 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
CTSA-214ENST00000606788 IFNL2Q8IZJ0 200 aa19.54■□□□□ 0.72
CTSA-214ENST00000606788 ANO2Q9NQ90 1003 aa19.54■□□□□ 0.72
CTSA-214ENST00000606788 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
CTSA-214ENST00000606788 CABP4P57796 275 aa19.53■□□□□ 0.72
CTSA-214ENST00000606788 A0A0G2JS52 829 aa19.53■□□□□ 0.72
CTSA-214ENST00000606788 RHPN1Q8TCX5 695 aa19.53■□□□□ 0.72
CTSA-214ENST00000606788 SLIT3O75094 1523 aa19.53■□□□□ 0.72
CTSA-214ENST00000606788 MYD88Q99836 296 aa19.53■□□□□ 0.72
CTSA-214ENST00000606788 IL25Q9H293 177 aa19.53■□□□□ 0.72
CTSA-214ENST00000606788 KSR2Q6VAB6 950 aa19.52■□□□□ 0.72
CTSA-214ENST00000606788 IBTKQ9P2D0 1353 aaPredicted RBP19.52■□□□□ 0.72
CTSA-214ENST00000606788 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
CTSA-214ENST00000606788 DTNBO60941 627 aa19.51■□□□□ 0.71
CTSA-214ENST00000606788 FOXD4L5Q5VV16 416 aaPredicted RBP19.51■□□□□ 0.71
CTSA-214ENST00000606788 FOXD4L4Q8WXT5 416 aaPredicted RBP19.51■□□□□ 0.71
CTSA-214ENST00000606788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.51■□□□□ 0.71
CTSA-214ENST00000606788 SSH3Q8TE77 659 aa19.51■□□□□ 0.71
CTSA-214ENST00000606788 PDIA6Q15084 440 aa19.5■□□□□ 0.71
CTSA-214ENST00000606788 SUCLG2Q96I99 432 aa19.5■□□□□ 0.71
CTSA-214ENST00000606788 RTN4Q9NQC3 1192 aaKnown RBP19.5■□□□□ 0.71
CTSA-214ENST00000606788 CHMP5Q9NZZ3 219 aa19.5■□□□□ 0.71
CTSA-214ENST00000606788 EVA1CP58658 441 aa19.5■□□□□ 0.71
CTSA-214ENST00000606788 TRPM3Q9HCF6 1732 aaPredicted RBP19.5■□□□□ 0.71
CTSA-214ENST00000606788 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
CTSA-214ENST00000606788 LARP1Q6PKG0 1096 aaKnown RBP19.49■□□□□ 0.71
CTSA-214ENST00000606788 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
CTSA-214ENST00000606788 K7ELQ4 463 aaPredicted RBP19.49■□□□□ 0.71
CTSA-214ENST00000606788 ERC2O15083 957 aa19.49■□□□□ 0.71
CTSA-214ENST00000606788 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
CTSA-214ENST00000606788 HOXB7P09629 217 aa19.48■□□□□ 0.71
CTSA-214ENST00000606788 PALD1Q9ULE6 856 aa19.48■□□□□ 0.71
CTSA-214ENST00000606788 USP54Q70EL1 1684 aa19.48■□□□□ 0.71
CTSA-214ENST00000606788 LARP6Q9BRS8 491 aaKnown RBP19.48■□□□□ 0.71
CTSA-214ENST00000606788 HYPKQ9NX55 129 aa19.48■□□□□ 0.71
CTSA-214ENST00000606788 IGKV5-2P06315 115 aa19.47■□□□□ 0.71
CTSA-214ENST00000606788 UPF3BQ9BZI7 483 aaKnown RBP19.47■□□□□ 0.71
CTSA-214ENST00000606788 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
CTSA-214ENST00000606788 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
CTSA-214ENST00000606788 GRM8O00222 908 aa19.46■□□□□ 0.71
CTSA-214ENST00000606788 CHAMP1Q96JM3 812 aa19.46■□□□□ 0.71
CTSA-214ENST00000606788 EPHA10Q5JZY3 1008 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 BRPF3Q9ULD4 1205 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 SALL3Q9BXA9 1300 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 REC8O95072 547 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 DDX58O95786 925 aaKnown RBP19.45■□□□□ 0.7
CTSA-214ENST00000606788 CHMLP26374 656 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 MCM4P33991 863 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 CWC27Q6UX04 472 aaKnown RBP19.45■□□□□ 0.7
CTSA-214ENST00000606788 KAZALD1Q96I82 304 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 A1BGP04217 495 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 NEK4P51957 841 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 POLA2Q14181 598 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 ESYT1Q9BSJ8 1104 aa19.45■□□□□ 0.7
CTSA-214ENST00000606788 SSFA2P28290 1259 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 UBE3BQ7Z3V4 1068 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 ZGPATQ8N5A5 531 aaKnown RBP19.44■□□□□ 0.7
CTSA-214ENST00000606788 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
CTSA-214ENST00000606788 KIF1BPQ96EK5 621 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 PKP1Q13835 747 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 AACSQ86V21 672 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 IL27Q8NEV9 243 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 ZCRB1Q8TBF4 217 aaKnown RBP19.44■□□□□ 0.7
CTSA-214ENST00000606788 SNX21Q969T3 373 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 NDUFB9Q9Y6M9 179 aa19.44■□□□□ 0.7
CTSA-214ENST00000606788 SNRPA1P09661 255 aaKnown RBP19.43■□□□□ 0.7
CTSA-214ENST00000606788 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
CTSA-214ENST00000606788 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
CTSA-214ENST00000606788 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
CTSA-214ENST00000606788 OSBPL3Q9H4L5 887 aa19.43■□□□□ 0.7
CTSA-214ENST00000606788 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
CTSA-214ENST00000606788 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
CTSA-214ENST00000606788 FMNL2Q96PY5 1086 aa19.42■□□□□ 0.7
CTSA-214ENST00000606788 FOXD4L6Q3SYB3 417 aaPredicted RBP19.42■□□□□ 0.7
CTSA-214ENST00000606788 FOXD4L3Q6VB84 417 aaPredicted RBP19.42■□□□□ 0.7
CTSA-214ENST00000606788 CCDC85AQ96PX6 553 aaPredicted RBP19.41■□□□□ 0.7
CTSA-214ENST00000606788 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
CTSA-214ENST00000606788 RABEP1Q15276 862 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 TPRNQ4KMQ1 711 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 TTLL7Q6ZT98 887 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 CLASRPQ8N2M8 674 aaKnown RBP19.41■□□□□ 0.7
CTSA-214ENST00000606788 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms