RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MEIS3Q99687 375 aa27.16■■□□□ 1.94
USP6NL-204ENST00000606752 PI4KAP2A4QPH2 592 aa27.15■■□□□ 1.94
USP6NL-204ENST00000606752 PI4KAP1Q8N8J0 262 aa27.15■■□□□ 1.94
USP6NL-204ENST00000606752 PIGBQ92521 554 aa27.15■■□□□ 1.94
USP6NL-204ENST00000606752 LRP6O75581 1613 aa27.14■■□□□ 1.94
USP6NL-204ENST00000606752 DNAAF4Q8WXU2 420 aa27.13■■□□□ 1.93
USP6NL-204ENST00000606752 TOGARAM1Q9Y4F4 1720 aa27.13■■□□□ 1.93
USP6NL-204ENST00000606752 SMC5Q8IY18 1101 aa27.13■■□□□ 1.93
USP6NL-204ENST00000606752 C5P01031 1676 aa27.12■■□□□ 1.93
USP6NL-204ENST00000606752 PTCD1O75127 700 aaKnown RBP27.11■■□□□ 1.93
USP6NL-204ENST00000606752 KSR2Q6VAB6 950 aa27.11■■□□□ 1.93
USP6NL-204ENST00000606752 SIRT2Q8IXJ6 389 aa27.11■■□□□ 1.93
USP6NL-204ENST00000606752 KCPQ6ZWJ8 1503 aa27.11■■□□□ 1.93
USP6NL-204ENST00000606752 DDX58O95786 925 aaKnown RBP27.11■■□□□ 1.93
USP6NL-204ENST00000606752 RPAP2Q8IXW5 612 aaPredicted RBP27.11■■□□□ 1.93
USP6NL-204ENST00000606752 USP21Q9UK80 565 aa27.11■■□□□ 1.93
USP6NL-204ENST00000606752 ADCY9O60503 1353 aa27.1■■□□□ 1.93
USP6NL-204ENST00000606752 GNAI3P08754 354 aa27.1■■□□□ 1.93
USP6NL-204ENST00000606752 SRCIN1Q9C0H9 1055 aa27.1■■□□□ 1.93
USP6NL-204ENST00000606752 PDZRN3Q9UPQ7 1066 aa27.1■■□□□ 1.93
USP6NL-204ENST00000606752 PAPPAQ13219 1627 aa27.1■■□□□ 1.93
USP6NL-204ENST00000606752 ASAP1Q9ULH1 1129 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 MYL6BP14649 208 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 BEND3Q5T5X7 828 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 MEX3CQ5U5Q3 659 aaKnown RBP27.09■■□□□ 1.93
USP6NL-204ENST00000606752 ANKRD44Q8N8A2 993 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 ATG3Q9NT62 314 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 ERBB4Q15303 1308 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 BCL9O00512 1426 aa27.09■■□□□ 1.93
USP6NL-204ENST00000606752 GLI3P10071 1580 aa27.08■■□□□ 1.93
USP6NL-204ENST00000606752 UBR2Q8IWV8 1755 aa27.08■■□□□ 1.93
USP6NL-204ENST00000606752 MARCH10Q8NA82 808 aaPredicted RBP27.08■■□□□ 1.93
USP6NL-204ENST00000606752 MAP3K2Q9Y2U5 619 aa27.08■■□□□ 1.93
USP6NL-204ENST00000606752 RGS3P49796 1198 aa27.07■■□□□ 1.92
USP6NL-204ENST00000606752 FAM98CQ17RN3 349 aaKnown RBP27.07■■□□□ 1.92
USP6NL-204ENST00000606752 LRP10Q7Z4F1 713 aa27.07■■□□□ 1.92
USP6NL-204ENST00000606752 ATP10DQ9P241 1426 aa27.07■■□□□ 1.92
USP6NL-204ENST00000606752 GNAI2P04899 355 aa27.06■■□□□ 1.92
USP6NL-204ENST00000606752 AIMP1Q12904 312 aaKnown RBP27.06■■□□□ 1.92
USP6NL-204ENST00000606752 CEP85Q6P2H3 762 aa27.06■■□□□ 1.92
USP6NL-204ENST00000606752 GCC1Q96CN9 775 aa27.06■■□□□ 1.92
USP6NL-204ENST00000606752 USP44Q9H0E7 712 aa27.06■■□□□ 1.92
USP6NL-204ENST00000606752 PRIM1P49642 420 aaKnown RBP27.06■■□□□ 1.92
USP6NL-204ENST00000606752 VSIG10Q8N0Z9 540 aa27.06■■□□□ 1.92
USP6NL-204ENST00000606752 COPS6Q7L5N1 327 aa27.05■■□□□ 1.92
USP6NL-204ENST00000606752 XAGE3Q8WTP9 111 aa27.05■■□□□ 1.92
USP6NL-204ENST00000606752 SYTL4Q96C24 671 aaPredicted RBP27.05■■□□□ 1.92
USP6NL-204ENST00000606752 TEX13AQ9BXU3 409 aaPredicted RBP27.04■■□□□ 1.92
USP6NL-204ENST00000606752 ALDH1L1O75891 902 aa27.03■■□□□ 1.92
USP6NL-204ENST00000606752 N4BP2Q86UW6 1770 aaPredicted RBP27.03■■□□□ 1.92
USP6NL-204ENST00000606752 ITGB4P16144 1822 aa27.03■■□□□ 1.92
USP6NL-204ENST00000606752 RIC3Q7Z5B4 369 aa27.02■■□□□ 1.92
USP6NL-204ENST00000606752 PIP4K2AP48426 406 aaPredicted RBP27.02■■□□□ 1.92
USP6NL-204ENST00000606752 LAMB4A4D0S4 1761 aa27.01■■□□□ 1.91
USP6NL-204ENST00000606752 NBPF26B4DH59 902 aa27.01■■□□□ 1.91
USP6NL-204ENST00000606752 UBTFL1P0CB47 393 aaPredicted RBP27.01■■□□□ 1.91
USP6NL-204ENST00000606752 NUCB1Q02818 461 aa27.01■■□□□ 1.91
USP6NL-204ENST00000606752 NBPF14Q5TI25 921 aa27.01■■□□□ 1.91
USP6NL-204ENST00000606752 NBPF10Q6P3W6 841 aaKnown RBP27.01■■□□□ 1.91
USP6NL-204ENST00000606752 ANKRD13DQ6ZTN6 518 aa27.01■■□□□ 1.91
USP6NL-204ENST00000606752 NBPF15Q8N660 670 aa27.01■■□□□ 1.91
USP6NL-204ENST00000606752 DCTPP1Q9H773 170 aa27■■□□□ 1.91
USP6NL-204ENST00000606752 TNKS1BP1Q9C0C2 1729 aaKnown RBP27■■□□□ 1.91
USP6NL-204ENST00000606752 A1BGP04217 495 aa27■■□□□ 1.91
USP6NL-204ENST00000606752 LINS1Q8NG48 757 aa27■■□□□ 1.91
USP6NL-204ENST00000606752 RBM42Q9BTD8 480 aaKnown RBP27■■□□□ 1.91
USP6NL-204ENST00000606752 AFF2P51816 1311 aa26.99■■□□□ 1.91
USP6NL-204ENST00000606752 HMMRO75330 724 aa26.99■■□□□ 1.91
USP6NL-204ENST00000606752 RBM19Q9Y4C8 960 aaKnown RBP26.98■■□□□ 1.91
USP6NL-204ENST00000606752 KAT6BQ8WYB5 2073 aa26.98■■□□□ 1.91
USP6NL-204ENST00000606752 STARD3NLO95772 234 aa26.97■■□□□ 1.91
USP6NL-204ENST00000606752 DNAJC10Q8IXB1 793 aa26.97■■□□□ 1.91
USP6NL-204ENST00000606752 ACSBG1Q96GR2 724 aa26.97■■□□□ 1.91
USP6NL-204ENST00000606752 GJD4Q96KN9 370 aaPredicted RBP26.97■■□□□ 1.91
USP6NL-204ENST00000606752 METTL22Q9BUU2 404 aaPredicted RBP26.97■■□□□ 1.91
USP6NL-204ENST00000606752 LRRFIP2Q9Y608 721 aaKnown RBP26.97■■□□□ 1.91
USP6NL-204ENST00000606752 PDE4AP27815 886 aa26.96■■□□□ 1.91
USP6NL-204ENST00000606752 NEXNQ0ZGT2 675 aa26.96■■□□□ 1.91
USP6NL-204ENST00000606752 CHD1LQ86WJ1 897 aa26.96■■□□□ 1.91
USP6NL-204ENST00000606752 ATP8B2P98198 1209 aa26.95■■□□□ 1.91
USP6NL-204ENST00000606752 ANKRD45Q5TZF3 282 aa26.95■■□□□ 1.91
USP6NL-204ENST00000606752 PLBD2Q8NHP8 589 aa26.95■■□□□ 1.91
USP6NL-204ENST00000606752 A0A0G2JS52 829 aa26.95■■□□□ 1.9
USP6NL-204ENST00000606752 NBPF7P0C2Y1 421 aaPredicted RBP26.95■■□□□ 1.9
USP6NL-204ENST00000606752 MYT1Q01538 1121 aa26.95■■□□□ 1.9
USP6NL-204ENST00000606752 CWF19L2Q2TBE0 894 aaKnown RBP26.95■■□□□ 1.9
USP6NL-204ENST00000606752 DOT1LQ8TEK3 1739 aa26.94■■□□□ 1.9
USP6NL-204ENST00000606752 IBTKQ9P2D0 1353 aaPredicted RBP26.94■■□□□ 1.9
USP6NL-204ENST00000606752 SLC4A9Q96Q91 983 aa26.93■■□□□ 1.9
USP6NL-204ENST00000606752 C9orf78Q9NZ63 289 aaPredicted RBP26.93■■□□□ 1.9
USP6NL-204ENST00000606752 HDAC5Q9UQL6 1122 aa26.93■■□□□ 1.9
USP6NL-204ENST00000606752 IGKV5-2P06315 115 aa26.93■■□□□ 1.9
USP6NL-204ENST00000606752 BACH2Q9BYV9 841 aa26.93■■□□□ 1.9
USP6NL-204ENST00000606752 TRPC5Q9UL62 973 aaPredicted RBP26.93■■□□□ 1.9
USP6NL-204ENST00000606752 LNPKQ9C0E8 428 aa26.92■■□□□ 1.9
USP6NL-204ENST00000606752 MYD88Q99836 296 aa26.91■■□□□ 1.9
USP6NL-204ENST00000606752 ATRNO75882 1429 aa26.9■■□□□ 1.9
USP6NL-204ENST00000606752 UTYO14607 1347 aa26.9■■□□□ 1.9
USP6NL-204ENST00000606752 NEURL1BA8MQ27 555 aa26.9■■□□□ 1.9
USP6NL-204ENST00000606752 GRM8O00222 908 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms