RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	CWC25	Q9NXE8	425 aa	Predicted RBP	11.65	□□□□□ -0.54
PAX6-231	ENST00000606377	SMTNL1	A8MU46	457 aa		11.65	□□□□□ -0.55
PAX6-231	ENST00000606377	CTCFL	Q8NI51	663 aa	Predicted RBP	11.65	□□□□□ -0.55
PAX6-231	ENST00000606377	C14orf93	Q9H972	538 aa	Known RBP	11.65	□□□□□ -0.55
PAX6-231	ENST00000606377	LARP6	Q9BRS8	491 aa	Known RBP	11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	DISP3	Q9P2K9	1392 aa		11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	IQCA1	Q86XH1	822 aa		11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	TRIM27	P14373	513 aa		11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	GOLIM4	O00461	696 aa		11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	MAP3K11	Q16584	847 aa		11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	FILIP1	Q7Z7B0	1213 aa		11.64	□□□□□ -0.55
PAX6-231	ENST00000606377	SSRP1	Q08945	709 aa	Known RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	C8orf76	Q96K31	380 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	MBIP	Q9NS73	344 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	CCDC196	A0A1B0GTZ2	297 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	IFIT3	O14879	490 aa	Known RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	SCLT1	Q96NL6	688 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	CCT2	P78371	535 aa	Known RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	SLF2	Q8IX21	1173 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	SYCE3	A1L190	88 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	RFC4	P35249	363 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	SSR1	P43307	286 aa	Known RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	WDR78	Q5VTH9	848 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	MCM4	P33991	863 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	LDHAL6A	Q6ZMR3	332 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	KIAA1328	Q86T90	577 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	URB2	Q14146	1524 aa	Known RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	HMGB1	P09429	215 aa	Known RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	SNRK	Q9NRH2	765 aa		11.63	□□□□□ -0.55
PAX6-231	ENST00000606377	SEPT7	Q16181	437 aa	Known RBP	11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	DDX46	Q7L014	1031 aa	Known RBP	11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	CCDC144CP	Q8IYA2	1237 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	CUL5	Q93034	780 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	TNR	Q92752	1358 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	GOLGA6L10	A6NI86	522 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	GOLGA8A	A7E2F4	631 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	GOLGA8B	A8MQT2	603 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	CFAP100	Q494V2	611 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	UBA5	Q9GZZ9	404 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	ANKRD62	A6NC57	917 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	KLHL10	Q6JEL2	608 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	UBE3B	Q7Z3V4	1068 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	CDC5L	Q99459	802 aa	Known RBP	11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	DMRT2	Q9Y5R5	561 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	THOC2	Q8NI27	1593 aa	Known RBP	11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	DHX29	Q7Z478	1369 aa	Known RBP	11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	PI4KAP2	A4QPH2	592 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377		H0YHG0	523 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	ANXA1	P04083	346 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	NLRP5	P59047	1200 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	PI4KAP1	Q8N8J0	262 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	EVI5L	Q96CN4	794 aa		11.62	□□□□□ -0.55
PAX6-231	ENST00000606377	NSD2	O96028	1365 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	RBM10	P98175	930 aa	Known RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	PPP1R42	Q7Z4L9	355 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	ACSBG1	Q96GR2	724 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	MAP7D2	Q96T17	732 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	RNF41	Q9H4P4	317 aa	Predicted RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	CATIP	Q7Z7H3	387 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	EPB41L2	O43491	1005 aa	Known RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	PDIA4	P13667	645 aa	Known RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	TSHZ3	Q63HK5	1081 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	CENPH	Q9H3R5	247 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	CCDC112	Q8NEF3	446 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	ZNF397	Q8NF99	534 aa	Predicted RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	MYCN	P04198	464 aa	Predicted RBP	11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	CADPS2	Q86UW7	1296 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	KDM5B	Q9UGL1	1544 aa		11.61	□□□□□ -0.55
PAX6-231	ENST00000606377	PPP1R12B	O60237	982 aa	Predicted RBP	11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	SNRPA1	P09661	255 aa	Known RBP	11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	NEBL	O76041	1014 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	DES	P17661	470 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	TTF1	Q15361	905 aa	Predicted RBP	11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	PPP4R3A	Q6IN85	833 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	MSH6	P52701	1360 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	PIK3R4	Q99570	1358 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	HMGN5	P82970	282 aa	Known RBP	11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	VAT1L	Q9HCJ6	419 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	FAM193A	P78312	1265 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	TSG101	Q99816	390 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	HAND2	P61296	217 aa		11.6	□□□□□ -0.55
PAX6-231	ENST00000606377	ECHDC1	Q9NTX5	307 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	BICRA	Q9NZM4	1560 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	ST5	P78524	1137 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	TMEM266	Q2M3C6	531 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	CWC15	Q9P013	229 aa	Known RBP	11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	CCDC194	A0A1B0GVG4	234 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	TMEM67	Q5HYA8	995 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	LIMCH1	Q9UPQ0	1083 aa		11.59	□□□□□ -0.55
PAX6-231	ENST00000606377	ENOX2	Q16206	610 aa	Known RBP	11.58	□□□□□ -0.55
PAX6-231	ENST00000606377	NBPF6	Q5VWK0	638 aa		11.58	□□□□□ -0.55
PAX6-231	ENST00000606377	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.58	□□□□□ -0.55
PAX6-231	ENST00000606377	RAB11FIP4	Q86YS3	637 aa		11.58	□□□□□ -0.55
PAX6-231	ENST00000606377	NBPF4	Q96M43	638 aa		11.58	□□□□□ -0.55

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