RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 NRXN2Q9P2S2 1712 aa28.32■■■□□ 2.12
VIM-AS1-202ENST00000605833 CYP19A1P11511 503 aaPredicted RBP28.31■■■□□ 2.12
VIM-AS1-202ENST00000605833 TM4SF1P30408 202 aa28.31■■■□□ 2.12
VIM-AS1-202ENST00000605833 ZBTB1Q9Y2K1 713 aa28.31■■■□□ 2.12
VIM-AS1-202ENST00000605833 DLEC1Q9Y238 1755 aa28.3■■■□□ 2.12
VIM-AS1-202ENST00000605833 WDR90Q96KV7 1748 aa28.3■■■□□ 2.12
VIM-AS1-202ENST00000605833 APLP1P51693 650 aa28.3■■■□□ 2.12
VIM-AS1-202ENST00000605833 MTHFSDQ2M296 383 aaKnown RBP28.3■■■□□ 2.12
VIM-AS1-202ENST00000605833 RNF181Q9P0P0 153 aa28.3■■■□□ 2.12
VIM-AS1-202ENST00000605833 CC2D1BQ5T0F9 858 aaKnown RBP28.28■■■□□ 2.12
VIM-AS1-202ENST00000605833 TNRC6CQ9HCJ0 1690 aaKnown RBP28.27■■■□□ 2.12
VIM-AS1-202ENST00000605833 NFIXQ14938 502 aa28.27■■■□□ 2.12
VIM-AS1-202ENST00000605833 NARFQ9UHQ1 456 aa28.26■■■□□ 2.11
VIM-AS1-202ENST00000605833 DIAPH1O60610 1272 aaKnown RBP28.25■■■□□ 2.11
VIM-AS1-202ENST00000605833 RASSF7Q02833 373 aa28.25■■■□□ 2.11
VIM-AS1-202ENST00000605833 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
VIM-AS1-202ENST00000605833 BCL2L12Q9HB09 334 aa28.24■■■□□ 2.11
VIM-AS1-202ENST00000605833 CNGB1Q14028 1251 aaPredicted RBP28.23■■■□□ 2.11
VIM-AS1-202ENST00000605833 C16orf71Q8IYS4 520 aaPredicted RBP28.23■■■□□ 2.11
VIM-AS1-202ENST00000605833 CARMIL3Q8ND23 1372 aa28.23■■■□□ 2.11
VIM-AS1-202ENST00000605833 SIPA1L3O60292 1781 aaPredicted RBP28.22■■■□□ 2.11
VIM-AS1-202ENST00000605833 PER1O15534 1290 aaPredicted RBP28.22■■■□□ 2.11
VIM-AS1-202ENST00000605833 CANXP27824 592 aaKnown RBP28.22■■■□□ 2.11
VIM-AS1-202ENST00000605833 RBM46Q8TBY0 533 aaKnown RBP28.22■■■□□ 2.11
VIM-AS1-202ENST00000605833 KDM2BQ8NHM5 1336 aa28.21■■■□□ 2.11
VIM-AS1-202ENST00000605833 TIAM2Q8IVF5 1701 aa28.21■■■□□ 2.11
VIM-AS1-202ENST00000605833 SCN7AQ01118 1682 aa28.21■■■□□ 2.11
VIM-AS1-202ENST00000605833 HTRA3P83110 453 aa28.2■■■□□ 2.1
VIM-AS1-202ENST00000605833 DNAJC5GQ8N7S2 189 aa28.2■■■□□ 2.1
VIM-AS1-202ENST00000605833 ANKRD31Q8N7Z5 1873 aa28.19■■■□□ 2.1
VIM-AS1-202ENST00000605833 SERPINB2P05120 415 aa28.19■■■□□ 2.1
VIM-AS1-202ENST00000605833 VSIG10Q8N0Z9 540 aa28.19■■■□□ 2.1
VIM-AS1-202ENST00000605833 RRAGCQ9HB90 399 aa28.19■■■□□ 2.1
VIM-AS1-202ENST00000605833 CCDC88AQ3V6T2 1871 aa28.19■■■□□ 2.1
VIM-AS1-202ENST00000605833 BICDL1Q6ZP65 573 aa28.18■■■□□ 2.1
VIM-AS1-202ENST00000605833 TTC5Q8N0Z6 440 aa28.17■■■□□ 2.1
VIM-AS1-202ENST00000605833 COL11A2P13942 1736 aaPredicted RBP28.16■■■□□ 2.1
VIM-AS1-202ENST00000605833 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
VIM-AS1-202ENST00000605833 PRELPP51888 382 aa28.15■■■□□ 2.1
VIM-AS1-202ENST00000605833 C2CD5Q86YS7 1000 aa28.15■■■□□ 2.1
VIM-AS1-202ENST00000605833 ZNF496Q96IT1 587 aaPredicted RBP28.14■■■□□ 2.1
VIM-AS1-202ENST00000605833 EIF5P55010 431 aaKnown RBP28.13■■■□□ 2.09
VIM-AS1-202ENST00000605833 ZNF330Q9Y3S2 320 aaPredicted RBP28.13■■■□□ 2.09
VIM-AS1-202ENST00000605833 HEG1Q9ULI3 1381 aa28.12■■■□□ 2.09
VIM-AS1-202ENST00000605833 STARD3NLO95772 234 aa28.12■■■□□ 2.09
VIM-AS1-202ENST00000605833 TEFQ10587 303 aa28.12■■■□□ 2.09
VIM-AS1-202ENST00000605833 FSTL1Q12841 308 aa28.12■■■□□ 2.09
VIM-AS1-202ENST00000605833 TTLL6Q8N841 843 aa28.12■■■□□ 2.09
VIM-AS1-202ENST00000605833 IL17REQ8NFR9 667 aa28.12■■■□□ 2.09
VIM-AS1-202ENST00000605833 TBC1D9BQ66K14 1250 aa28.11■■■□□ 2.09
VIM-AS1-202ENST00000605833 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
VIM-AS1-202ENST00000605833 LMNB1P20700 586 aa28.1■■■□□ 2.09
VIM-AS1-202ENST00000605833 ZNF790Q6PG37 636 aa28.1■■■□□ 2.09
VIM-AS1-202ENST00000605833 CACNA1SQ13698 1873 aa28.1■■■□□ 2.09
VIM-AS1-202ENST00000605833 A0A087WZG4 1122 aa28.09■■■□□ 2.09
VIM-AS1-202ENST00000605833 H0YIN7 160 aa28.09■■■□□ 2.09
VIM-AS1-202ENST00000605833 CCDC24Q8N4L8 307 aa28.09■■■□□ 2.09
VIM-AS1-202ENST00000605833 GAS2L2Q8NHY3 880 aa28.09■■■□□ 2.09
VIM-AS1-202ENST00000605833 BCORQ6W2J9 1755 aa28.09■■■□□ 2.09
VIM-AS1-202ENST00000605833 TBC1D2BQ9UPU7 963 aa28.08■■■□□ 2.09
VIM-AS1-202ENST00000605833 ZC3H4Q9UPT8 1303 aaKnown RBP28.08■■■□□ 2.09
VIM-AS1-202ENST00000605833 NPC1L1Q9UHC9 1359 aa28.08■■■□□ 2.09
VIM-AS1-202ENST00000605833 NFKBIEO00221 500 aa28.07■■■□□ 2.08
VIM-AS1-202ENST00000605833 KLRG1Q96E93 195 aa28.07■■■□□ 2.08
VIM-AS1-202ENST00000605833 ZNF219Q9P2Y4 722 aaPredicted RBP28.06■■■□□ 2.08
VIM-AS1-202ENST00000605833 FER1L6Q2WGJ9 1857 aa28.05■■■□□ 2.08
VIM-AS1-202ENST00000605833 ZNF622Q969S3 477 aaKnown RBP eCLIP28.05■■■□□ 2.08
VIM-AS1-202ENST00000605833 KCNQ3O43525 872 aa28.04■■■□□ 2.08
VIM-AS1-202ENST00000605833 PRR5LQ6MZQ0 368 aa28.04■■■□□ 2.08
VIM-AS1-202ENST00000605833 SMC1BQ8NDV3 1235 aa28.04■■■□□ 2.08
VIM-AS1-202ENST00000605833 CEMIPQ8WUJ3 1361 aa28.03■■■□□ 2.08
VIM-AS1-202ENST00000605833 DICER1Q9UPY3 1922 aaKnown RBP28.03■■■□□ 2.08
VIM-AS1-202ENST00000605833 GLTPD2A6NH11 291 aa28.03■■■□□ 2.08
VIM-AS1-202ENST00000605833 A1BGP04217 495 aa28.03■■■□□ 2.08
VIM-AS1-202ENST00000605833 PHACTR3Q96KR7 559 aa28.03■■■□□ 2.08
VIM-AS1-202ENST00000605833 FMNL2Q96PY5 1086 aa28.03■■■□□ 2.08
VIM-AS1-202ENST00000605833 IL6STP40189 918 aaPredicted RBP28.02■■■□□ 2.08
VIM-AS1-202ENST00000605833 TEX13AQ9BXU3 409 aaPredicted RBP28.02■■■□□ 2.08
VIM-AS1-202ENST00000605833 PRKAR2BP31323 418 aa28.01■■■□□ 2.07
VIM-AS1-202ENST00000605833 PCNTO95613 3336 aa28■■■□□ 2.07
VIM-AS1-202ENST00000605833 C21orf2O43822 256 aa28■■■□□ 2.07
VIM-AS1-202ENST00000605833 PIP4K2AP48426 406 aaPredicted RBP28■■■□□ 2.07
VIM-AS1-202ENST00000605833 BRIP1Q9BX63 1249 aa28■■■□□ 2.07
VIM-AS1-202ENST00000605833 SLX4Q8IY92 1834 aa27.99■■■□□ 2.07
VIM-AS1-202ENST00000605833 ARFGEF2Q9Y6D5 1785 aa27.99■■■□□ 2.07
VIM-AS1-202ENST00000605833 CAMTA2O94983 1202 aa27.99■■■□□ 2.07
VIM-AS1-202ENST00000605833 VEGFAP15692 232 aaPredicted RBP27.99■■■□□ 2.07
VIM-AS1-202ENST00000605833 PDE6BP35913 854 aa27.99■■■□□ 2.07
VIM-AS1-202ENST00000605833 RSPH6AQ9H0K4 717 aa27.99■■■□□ 2.07
VIM-AS1-202ENST00000605833 BTBD11A6QL63 1104 aa27.98■■■□□ 2.07
VIM-AS1-202ENST00000605833 JMYQ8N9B5 988 aa27.98■■■□□ 2.07
VIM-AS1-202ENST00000605833 CNBD1Q8NA66 436 aa27.97■■■□□ 2.07
VIM-AS1-202ENST00000605833 PRAMEF22A3QJZ6 481 aa27.96■■■□□ 2.07
VIM-AS1-202ENST00000605833 NPHP1O15259 732 aa27.96■■■□□ 2.07
VIM-AS1-202ENST00000605833 NPM2Q86SE8 214 aaKnown RBP27.96■■■□□ 2.07
VIM-AS1-202ENST00000605833 SETDB2Q96T68 719 aa27.96■■■□□ 2.07
VIM-AS1-202ENST00000605833 DZIP3Q86Y13 1208 aaKnown RBP27.95■■■□□ 2.06
VIM-AS1-202ENST00000605833 POTECB2RU33 542 aa27.94■■■□□ 2.06
VIM-AS1-202ENST00000605833 CFAP53Q96M91 514 aa27.94■■■□□ 2.06
VIM-AS1-202ENST00000605833 PDZRN3Q9UPQ7 1066 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms