RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 USPL1Q5W0Q7 1092 aa24.05■■□□□ 1.44
CCDC12-212ENST00000605358 KCPQ6ZWJ8 1503 aa24.03■■□□□ 1.44
CCDC12-212ENST00000605358 COL15A1P39059 1388 aa24.03■■□□□ 1.44
CCDC12-212ENST00000605358 SLC39A6Q13433 755 aa24.02■■□□□ 1.44
CCDC12-212ENST00000605358 RBM46Q8TBY0 533 aaKnown RBP24.02■■□□□ 1.44
CCDC12-212ENST00000605358 KDM2BQ8NHM5 1336 aa24.02■■□□□ 1.44
CCDC12-212ENST00000605358 STARD3NLO95772 234 aa24.01■■□□□ 1.43
CCDC12-212ENST00000605358 ZC3H4Q9UPT8 1303 aaKnown RBP24.01■■□□□ 1.43
CCDC12-212ENST00000605358 NFIXQ14938 502 aa24■■□□□ 1.43
CCDC12-212ENST00000605358 TTC5Q8N0Z6 440 aa24■■□□□ 1.43
CCDC12-212ENST00000605358 TEX13AQ9BXU3 409 aaPredicted RBP24■■□□□ 1.43
CCDC12-212ENST00000605358 NMRK2Q9NPI5 230 aa24■■□□□ 1.43
CCDC12-212ENST00000605358 NRXN2Q9P2S2 1712 aa24■■□□□ 1.43
CCDC12-212ENST00000605358 UBR2Q8IWV8 1755 aa23.99■■□□□ 1.43
CCDC12-212ENST00000605358 A0A087WZG4 1122 aa23.99■■□□□ 1.43
CCDC12-212ENST00000605358 CHRNA5P30532 468 aa23.99■■□□□ 1.43
CCDC12-212ENST00000605358 C16orf71Q8IYS4 520 aaPredicted RBP23.99■■□□□ 1.43
CCDC12-212ENST00000605358 ZBTB1Q9Y2K1 713 aa23.99■■□□□ 1.43
CCDC12-212ENST00000605358 FSTL1Q12841 308 aa23.98■■□□□ 1.43
CCDC12-212ENST00000605358 CC2D1BQ5T0F9 858 aaKnown RBP23.98■■□□□ 1.43
CCDC12-212ENST00000605358 GAS2L2Q8NHY3 880 aa23.98■■□□□ 1.43
CCDC12-212ENST00000605358 RNF181Q9P0P0 153 aa23.98■■□□□ 1.43
CCDC12-212ENST00000605358 SBF1O95248 1867 aa23.98■■□□□ 1.43
CCDC12-212ENST00000605358 SERPINB2P05120 415 aa23.97■■□□□ 1.43
CCDC12-212ENST00000605358 AFDNP55196 1824 aaKnown RBP23.97■■□□□ 1.43
CCDC12-212ENST00000605358 PDZRN3Q9UPQ7 1066 aa23.97■■□□□ 1.43
CCDC12-212ENST00000605358 GNAT3A8MTJ3 354 aa23.96■■□□□ 1.43
CCDC12-212ENST00000605358 EIF5P55010 431 aaKnown RBP23.96■■□□□ 1.43
CCDC12-212ENST00000605358 BCL2L12Q9HB09 334 aa23.96■■□□□ 1.43
CCDC12-212ENST00000605358 TEFQ10587 303 aa23.95■■□□□ 1.42
CCDC12-212ENST00000605358 DNAJC5GQ8N7S2 189 aa23.95■■□□□ 1.42
CCDC12-212ENST00000605358 ZNF790Q6PG37 636 aa23.94■■□□□ 1.42
CCDC12-212ENST00000605358 DLEC1Q9Y238 1755 aa23.93■■□□□ 1.42
CCDC12-212ENST00000605358 TTLL6Q8N841 843 aa23.93■■□□□ 1.42
CCDC12-212ENST00000605358 COL3A1P02461 1466 aaPredicted RBP23.93■■□□□ 1.42
CCDC12-212ENST00000605358 H0YIN7 160 aa23.92■■□□□ 1.42
CCDC12-212ENST00000605358 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
CCDC12-212ENST00000605358 IL17REQ8NFR9 667 aa23.92■■□□□ 1.42
CCDC12-212ENST00000605358 TNRC6CQ9HCJ0 1690 aaKnown RBP23.92■■□□□ 1.42
CCDC12-212ENST00000605358 HEG1Q9ULI3 1381 aa23.91■■□□□ 1.42
CCDC12-212ENST00000605358 U2SURPO15042 1029 aaKnown RBP23.91■■□□□ 1.42
CCDC12-212ENST00000605358 LMNB1P20700 586 aa23.91■■□□□ 1.42
CCDC12-212ENST00000605358 IL6STP40189 918 aaPredicted RBP23.9■■□□□ 1.42
CCDC12-212ENST00000605358 ZNF496Q96IT1 587 aaPredicted RBP23.9■■□□□ 1.42
CCDC12-212ENST00000605358 C2CD5Q86YS7 1000 aa23.89■■□□□ 1.41
CCDC12-212ENST00000605358 FMNL2Q96PY5 1086 aa23.89■■□□□ 1.41
CCDC12-212ENST00000605358 RRAGCQ9HB90 399 aa23.89■■□□□ 1.41
CCDC12-212ENST00000605358 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
CCDC12-212ENST00000605358 SIPA1L3O60292 1781 aaPredicted RBP23.88■■□□□ 1.41
CCDC12-212ENST00000605358 PDE6BP35913 854 aa23.88■■□□□ 1.41
CCDC12-212ENST00000605358 BRIP1Q9BX63 1249 aa23.88■■□□□ 1.41
CCDC12-212ENST00000605358 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
CCDC12-212ENST00000605358 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
CCDC12-212ENST00000605358 WDR90Q96KV7 1748 aa23.87■■□□□ 1.41
CCDC12-212ENST00000605358 GLTPD2A6NH11 291 aa23.86■■□□□ 1.41
CCDC12-212ENST00000605358 SMC1BQ8NDV3 1235 aa23.86■■□□□ 1.41
CCDC12-212ENST00000605358 NUDCQ9Y266 331 aa23.85■■□□□ 1.41
CCDC12-212ENST00000605358 CARMIL3Q8ND23 1372 aa23.85■■□□□ 1.41
CCDC12-212ENST00000605358 VEGFAP15692 232 aaPredicted RBP23.84■■□□□ 1.41
CCDC12-212ENST00000605358 TBC1D9BQ66K14 1250 aa23.84■■□□□ 1.41
CCDC12-212ENST00000605358 RASSF7Q02833 373 aa23.83■■□□□ 1.41
CCDC12-212ENST00000605358 BICDL1Q6ZP65 573 aa23.83■■□□□ 1.41
CCDC12-212ENST00000605358 KLRG1Q96E93 195 aa23.83■■□□□ 1.41
CCDC12-212ENST00000605358 SCN7AQ01118 1682 aa23.83■■□□□ 1.4
CCDC12-212ENST00000605358 BTBD11A6QL63 1104 aa23.82■■□□□ 1.4
CCDC12-212ENST00000605358 SETDB2Q96T68 719 aa23.82■■□□□ 1.4
CCDC12-212ENST00000605358 DPY19L2Q6NUT2 758 aa23.81■■□□□ 1.4
CCDC12-212ENST00000605358 JMYQ8N9B5 988 aa23.81■■□□□ 1.4
CCDC12-212ENST00000605358 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
CCDC12-212ENST00000605358 TBC1D2BQ9UPU7 963 aa23.81■■□□□ 1.4
CCDC12-212ENST00000605358 RGL2O15211 777 aa23.8■■□□□ 1.4
CCDC12-212ENST00000605358 PRKAR2BP31323 418 aa23.8■■□□□ 1.4
CCDC12-212ENST00000605358 CCDC88AQ3V6T2 1871 aa23.8■■□□□ 1.4
CCDC12-212ENST00000605358 PRR5LQ6MZQ0 368 aa23.8■■□□□ 1.4
CCDC12-212ENST00000605358 CLEC4GQ6UXB4 293 aa23.8■■□□□ 1.4
CCDC12-212ENST00000605358 ANKRD31Q8N7Z5 1873 aa23.79■■□□□ 1.4
CCDC12-212ENST00000605358 NFKBIEO00221 500 aa23.79■■□□□ 1.4
CCDC12-212ENST00000605358 ZNF622Q969S3 477 aaKnown RBP eCLIP23.79■■□□□ 1.43e-8■■□□□ 12.2
CCDC12-212ENST00000605358 PHACTR3Q96KR7 559 aa23.79■■□□□ 1.4
CCDC12-212ENST00000605358 LTBP3Q9NS15 1303 aa23.79■■□□□ 1.4
CCDC12-212ENST00000605358 HTATSF1O43719 755 aaKnown RBP23.78■■□□□ 1.4
CCDC12-212ENST00000605358 CAMTA2O94983 1202 aa23.78■■□□□ 1.4
CCDC12-212ENST00000605358 A1BGP04217 495 aa23.78■■□□□ 1.4
CCDC12-212ENST00000605358 PRELPP51888 382 aa23.78■■□□□ 1.4
CCDC12-212ENST00000605358 SOGA3Q5TF21 947 aa23.78■■□□□ 1.4
CCDC12-212ENST00000605358 RTF1Q92541 710 aaKnown RBP23.78■■□□□ 1.4
CCDC12-212ENST00000605358 CNKSR1Q969H4 720 aa23.78■■□□□ 1.4
CCDC12-212ENST00000605358 ZNF330Q9Y3S2 320 aaPredicted RBP23.78■■□□□ 1.4
CCDC12-212ENST00000605358 ST5P78524 1137 aa23.77■■□□□ 1.4
CCDC12-212ENST00000605358 STYK1Q6J9G0 422 aa23.77■■□□□ 1.4
CCDC12-212ENST00000605358 CNBD1Q8NA66 436 aa23.77■■□□□ 1.4
CCDC12-212ENST00000605358 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
CCDC12-212ENST00000605358 SNRPA1P09661 255 aaKnown RBP23.76■■□□□ 1.39
CCDC12-212ENST00000605358 DZIP3Q86Y13 1208 aaKnown RBP23.76■■□□□ 1.39
CCDC12-212ENST00000605358 FER1L6Q2WGJ9 1857 aa23.76■■□□□ 1.39
CCDC12-212ENST00000605358 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
CCDC12-212ENST00000605358 NPHP1O15259 732 aa23.75■■□□□ 1.39
CCDC12-212ENST00000605358 ZNF652Q9Y2D9 606 aa23.75■■□□□ 1.39
CCDC12-212ENST00000605358 USP16Q9Y5T5 823 aa23.74■■□□□ 1.39
CCDC12-212ENST00000605358 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms