RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
LINC01235-201ENST00000604724 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
LINC01235-201ENST00000604724 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
LINC01235-201ENST00000604724 GLI3P10071 1580 aa13.49□□□□□ -0.25
LINC01235-201ENST00000604724 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
LINC01235-201ENST00000604724 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
LINC01235-201ENST00000604724 CARD10Q9BWT7 1032 aa13.49□□□□□ -0.25
LINC01235-201ENST00000604724 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
LINC01235-201ENST00000604724 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
LINC01235-201ENST00000604724 IL2RBP14784 551 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 CABP4P57796 275 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 DDX21Q9NR30 783 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC01235-201ENST00000604724 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
LINC01235-201ENST00000604724 EVA1CP58658 441 aa13.47□□□□□ -0.25
LINC01235-201ENST00000604724 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
LINC01235-201ENST00000604724 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
LINC01235-201ENST00000604724 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
LINC01235-201ENST00000604724 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
LINC01235-201ENST00000604724 MYL6BP14649 208 aa13.46□□□□□ -0.25
LINC01235-201ENST00000604724 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
LINC01235-201ENST00000604724 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
LINC01235-201ENST00000604724 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
LINC01235-201ENST00000604724 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
LINC01235-201ENST00000604724 AHDC1Q5TGY3 1603 aaPredicted RBP13.46□□□□□ -0.25
LINC01235-201ENST00000604724 CWF19L2Q2TBE0 894 aaKnown RBP13.46□□□□□ -0.26
LINC01235-201ENST00000604724 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.26
LINC01235-201ENST00000604724 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
LINC01235-201ENST00000604724 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
LINC01235-201ENST00000604724 C22orf23Q9BZE7 217 aa13.45□□□□□ -0.26
LINC01235-201ENST00000604724 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
LINC01235-201ENST00000604724 PPP1R42Q7Z4L9 355 aa13.45□□□□□ -0.26
LINC01235-201ENST00000604724 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
LINC01235-201ENST00000604724 COL16A1Q07092 1604 aaPredicted RBP13.45□□□□□ -0.26
LINC01235-201ENST00000604724 IBTKQ9P2D0 1353 aaPredicted RBP13.44□□□□□ -0.26
LINC01235-201ENST00000604724 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
LINC01235-201ENST00000604724 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
LINC01235-201ENST00000604724 UBR2Q8IWV8 1755 aa13.44□□□□□ -0.26
LINC01235-201ENST00000604724 SSH3Q8TE77 659 aa13.44□□□□□ -0.26
LINC01235-201ENST00000604724 COL22A1Q8NFW1 1626 aaPredicted RBP13.43□□□□□ -0.26
LINC01235-201ENST00000604724 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
LINC01235-201ENST00000604724 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
LINC01235-201ENST00000604724 XAGE3Q8WTP9 111 aa13.43□□□□□ -0.26
LINC01235-201ENST00000604724 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
LINC01235-201ENST00000604724 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
LINC01235-201ENST00000604724 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
LINC01235-201ENST00000604724 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 POLA2Q14181 598 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 NBR1Q14596 966 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
LINC01235-201ENST00000604724 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 CDC45O75419 566 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 DDX58O95786 925 aaKnown RBP13.41□□□□□ -0.26
LINC01235-201ENST00000604724 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 PDE1AP54750 535 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 C9orf78Q9NZ63 289 aaPredicted RBP13.41□□□□□ -0.26
LINC01235-201ENST00000604724 SDSP20132 328 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 RIC3Q7Z5B4 369 aa13.41□□□□□ -0.26
LINC01235-201ENST00000604724 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
LINC01235-201ENST00000604724 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.26
LINC01235-201ENST00000604724 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
LINC01235-201ENST00000604724 OSBPL3Q9H4L5 887 aa13.4□□□□□ -0.26
LINC01235-201ENST00000604724 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
LINC01235-201ENST00000604724 KAZALD1Q96I82 304 aa13.39□□□□□ -0.27
LINC01235-201ENST00000604724 ARFGEF2Q9Y6D5 1785 aa13.39□□□□□ -0.27
LINC01235-201ENST00000604724 GRM8O00222 908 aa13.39□□□□□ -0.27
LINC01235-201ENST00000604724 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
LINC01235-201ENST00000604724 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
LINC01235-201ENST00000604724 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
LINC01235-201ENST00000604724 PHLPP1O60346 1717 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 MX1P20591 662 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 MTX1Q13505 466 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
LINC01235-201ENST00000604724 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 SUCLG2Q96I99 432 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 MYD88Q99836 296 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 TNS2Q63HR2 1409 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 UTYO14607 1347 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 NEURL1BA8MQ27 555 aa13.38□□□□□ -0.27
LINC01235-201ENST00000604724 METTL22Q9BUU2 404 aaPredicted RBP13.38□□□□□ -0.27
LINC01235-201ENST00000604724 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
LINC01235-201ENST00000604724 BECN1Q14457 450 aa13.37□□□□□ -0.27
LINC01235-201ENST00000604724 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
LINC01235-201ENST00000604724 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
LINC01235-201ENST00000604724 BICC1Q9H694 974 aaKnown RBP13.36□□□□□ -0.27
LINC01235-201ENST00000604724 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
LINC01235-201ENST00000604724 A1BGP04217 495 aa13.36□□□□□ -0.27
LINC01235-201ENST00000604724 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
LINC01235-201ENST00000604724 GCKRQ14397 625 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms