RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 NFIXQ14938 502 aa16.23■□□□□ 0.19
PDLIM1P1-201ENST00000604187 AEBP1Q8IUX7 1158 aa16.23■□□□□ 0.19
PDLIM1P1-201ENST00000604187 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
PDLIM1P1-201ENST00000604187 NFKBIEO00221 500 aa16.22■□□□□ 0.19
PDLIM1P1-201ENST00000604187 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
PDLIM1P1-201ENST00000604187 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
PDLIM1P1-201ENST00000604187 POTECB2RU33 542 aa16.21■□□□□ 0.19
PDLIM1P1-201ENST00000604187 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
PDLIM1P1-201ENST00000604187 C2CD5Q86YS7 1000 aa16.21■□□□□ 0.19
PDLIM1P1-201ENST00000604187 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
PDLIM1P1-201ENST00000604187 COL15A1P39059 1388 aa16.19■□□□□ 0.18
PDLIM1P1-201ENST00000604187 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
PDLIM1P1-201ENST00000604187 SERPINB2P05120 415 aa16.19■□□□□ 0.18
PDLIM1P1-201ENST00000604187 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
PDLIM1P1-201ENST00000604187 CREBZFQ9NS37 354 aa16.19■□□□□ 0.18
PDLIM1P1-201ENST00000604187 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
PDLIM1P1-201ENST00000604187 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
PDLIM1P1-201ENST00000604187 H0YIN7 160 aa16.18■□□□□ 0.18
PDLIM1P1-201ENST00000604187 CYP19A1P11511 503 aaPredicted RBP16.18■□□□□ 0.18
PDLIM1P1-201ENST00000604187 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
PDLIM1P1-201ENST00000604187 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
PDLIM1P1-201ENST00000604187 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
PDLIM1P1-201ENST00000604187 TJP1Q07157 1748 aa16.17■□□□□ 0.18
PDLIM1P1-201ENST00000604187 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
PDLIM1P1-201ENST00000604187 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
PDLIM1P1-201ENST00000604187 ZBTB1Q9Y2K1 713 aa16.17■□□□□ 0.18
PDLIM1P1-201ENST00000604187 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1P1-201ENST00000604187 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 FOXN1O15353 648 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 POTEJP0CG39 1038 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 ERFEQ4G0M1 354 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 SLC52A2Q9HAB3 445 aa16.15■□□□□ 0.18
PDLIM1P1-201ENST00000604187 C21orf2O43822 256 aa16.14■□□□□ 0.17
PDLIM1P1-201ENST00000604187 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
PDLIM1P1-201ENST00000604187 ZNF622Q969S3 477 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDLIM1P1-201ENST00000604187 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
PDLIM1P1-201ENST00000604187 CNTNAP1P78357 1384 aa16.13■□□□□ 0.17
PDLIM1P1-201ENST00000604187 TIAM2Q8IVF5 1701 aa16.12■□□□□ 0.17
PDLIM1P1-201ENST00000604187 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
PDLIM1P1-201ENST00000604187 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
PDLIM1P1-201ENST00000604187 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
PDLIM1P1-201ENST00000604187 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
PDLIM1P1-201ENST00000604187 DDNO94850 711 aaPredicted RBP16.11■□□□□ 0.17
PDLIM1P1-201ENST00000604187 AIDAQ96BJ3 306 aa16.11■□□□□ 0.17
PDLIM1P1-201ENST00000604187 TAOK3Q9H2K8 898 aa16.11■□□□□ 0.17
PDLIM1P1-201ENST00000604187 SBF1O95248 1867 aa16.11■□□□□ 0.17
PDLIM1P1-201ENST00000604187 IL13P35225 146 aa16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 PDE6BP35913 854 aa16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 CTCFP49711 727 aaPredicted RBP16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 CCDC24Q8N4L8 307 aa16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 MRC1P22897 1456 aa16.1■□□□□ 0.17
PDLIM1P1-201ENST00000604187 NRXN2Q9P2S2 1712 aa16.09■□□□□ 0.17
PDLIM1P1-201ENST00000604187 SLC34A2O95436 690 aa16.09■□□□□ 0.17
PDLIM1P1-201ENST00000604187 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
PDLIM1P1-201ENST00000604187 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
PDLIM1P1-201ENST00000604187 LTBP3Q9NS15 1303 aa16.09■□□□□ 0.17
PDLIM1P1-201ENST00000604187 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
PDLIM1P1-201ENST00000604187 VEGFBP49765 207 aa16.08■□□□□ 0.16
PDLIM1P1-201ENST00000604187 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.16
PDLIM1P1-201ENST00000604187 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
PDLIM1P1-201ENST00000604187 PANK3Q9H999 370 aa16.08■□□□□ 0.16
PDLIM1P1-201ENST00000604187 PDZRN3Q9UPQ7 1066 aa16.08■□□□□ 0.16
PDLIM1P1-201ENST00000604187 A0A087WZG4 1122 aa16.07■□□□□ 0.16
PDLIM1P1-201ENST00000604187 IQCA1LA6NCM1 817 aa16.07■□□□□ 0.16
PDLIM1P1-201ENST00000604187 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
PDLIM1P1-201ENST00000604187 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
PDLIM1P1-201ENST00000604187 ZNF330Q9Y3S2 320 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1P1-201ENST00000604187 DLEC1Q9Y238 1755 aa16.06■□□□□ 0.16
PDLIM1P1-201ENST00000604187 STARD3NLO95772 234 aa16.06■□□□□ 0.16
PDLIM1P1-201ENST00000604187 LBX1P52954 281 aa16.06■□□□□ 0.16
PDLIM1P1-201ENST00000604187 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
PDLIM1P1-201ENST00000604187 TMEM88BA6NKF7 163 aa16.05■□□□□ 0.16
PDLIM1P1-201ENST00000604187 CNBD1Q8NA66 436 aa16.05■□□□□ 0.16
PDLIM1P1-201ENST00000604187 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
PDLIM1P1-201ENST00000604187 TAF1DQ9H5J8 278 aaPredicted RBP16.05■□□□□ 0.16
PDLIM1P1-201ENST00000604187 NPHP1O15259 732 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 HMOX1P09601 288 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 EAPPQ56P03 285 aaPredicted RBP16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 STYK1Q6J9G0 422 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 WBP1LQ9NX94 342 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
PDLIM1P1-201ENST00000604187 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
PDLIM1P1-201ENST00000604187 FAM161AQ3B820 660 aa16.03■□□□□ 0.16
PDLIM1P1-201ENST00000604187 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
PDLIM1P1-201ENST00000604187 ABHD8Q96I13 439 aa16.03■□□□□ 0.16
PDLIM1P1-201ENST00000604187 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
PDLIM1P1-201ENST00000604187 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.16
PDLIM1P1-201ENST00000604187 SRGNP10124 158 aa16.02■□□□□ 0.16
PDLIM1P1-201ENST00000604187 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
PDLIM1P1-201ENST00000604187 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
PDLIM1P1-201ENST00000604187 ST5P78524 1137 aa16.01■□□□□ 0.15
PDLIM1P1-201ENST00000604187 ZNF496Q96IT1 587 aaPredicted RBP16.01■□□□□ 0.15
PDLIM1P1-201ENST00000604187 SETDB2Q96T68 719 aa16.01■□□□□ 0.15
PDLIM1P1-201ENST00000604187 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms