RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 HTRA3P83110 453 aa22.96■■□□□ 1.27
CCDC12-210ENST00000604181 RNF181Q9P0P0 153 aa22.96■■□□□ 1.27
CCDC12-210ENST00000604181 BCL2L12Q9HB09 334 aa22.95■■□□□ 1.26
CCDC12-210ENST00000604181 ZBTB1Q9Y2K1 713 aa22.95■■□□□ 1.26
CCDC12-210ENST00000604181 NFIXQ14938 502 aa22.94■■□□□ 1.26
CCDC12-210ENST00000604181 MTHFSDQ2M296 383 aaKnown RBP22.94■■□□□ 1.26
CCDC12-210ENST00000604181 ZPR1O75312 459 aa22.93■■□□□ 1.26
CCDC12-210ENST00000604181 RASSF7Q02833 373 aa22.93■■□□□ 1.26
CCDC12-210ENST00000604181 WDR90Q96KV7 1748 aa22.93■■□□□ 1.26
CCDC12-210ENST00000604181 NRXN2Q9P2S2 1712 aa22.93■■□□□ 1.26
CCDC12-210ENST00000604181 COL15A1P39059 1388 aa22.92■■□□□ 1.26
CCDC12-210ENST00000604181 KIF7Q2M1P5 1343 aa22.92■■□□□ 1.26
CCDC12-210ENST00000604181 PRELPP51888 382 aa22.92■■□□□ 1.26
CCDC12-210ENST00000604181 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
CCDC12-210ENST00000604181 NARFQ9UHQ1 456 aa22.92■■□□□ 1.26
CCDC12-210ENST00000604181 RRAGCQ9HB90 399 aa22.9■■□□□ 1.26
CCDC12-210ENST00000604181 UBR2Q8IWV8 1755 aa22.9■■□□□ 1.26
CCDC12-210ENST00000604181 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.26
CCDC12-210ENST00000604181 PER1O15534 1290 aaPredicted RBP22.88■■□□□ 1.25
CCDC12-210ENST00000604181 DLEC1Q9Y238 1755 aa22.87■■□□□ 1.25
CCDC12-210ENST00000604181 SERPINB2P05120 415 aa22.87■■□□□ 1.25
CCDC12-210ENST00000604181 KDM2BQ8NHM5 1336 aa22.86■■□□□ 1.25
CCDC12-210ENST00000604181 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
CCDC12-210ENST00000604181 CC2D1BQ5T0F9 858 aaKnown RBP22.86■■□□□ 1.25
CCDC12-210ENST00000604181 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
CCDC12-210ENST00000604181 TNRC6CQ9HCJ0 1690 aaKnown RBP22.85■■□□□ 1.25
CCDC12-210ENST00000604181 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
CCDC12-210ENST00000604181 DIAPH1O60610 1272 aaKnown RBP22.84■■□□□ 1.25
CCDC12-210ENST00000604181 FSTL1Q12841 308 aa22.84■■□□□ 1.25
CCDC12-210ENST00000604181 VSIG10Q8N0Z9 540 aa22.84■■□□□ 1.25
CCDC12-210ENST00000604181 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
CCDC12-210ENST00000604181 EIF5P55010 431 aaKnown RBP22.83■■□□□ 1.25
CCDC12-210ENST00000604181 BICDL1Q6ZP65 573 aa22.83■■□□□ 1.25
CCDC12-210ENST00000604181 KLRG1Q96E93 195 aa22.83■■□□□ 1.25
CCDC12-210ENST00000604181 CCDC88AQ3V6T2 1871 aa22.83■■□□□ 1.24
CCDC12-210ENST00000604181 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.24
CCDC12-210ENST00000604181 C2CD5Q86YS7 1000 aa22.82■■□□□ 1.24
CCDC12-210ENST00000604181 IL17REQ8NFR9 667 aa22.82■■□□□ 1.24
CCDC12-210ENST00000604181 ZNF496Q96IT1 587 aaPredicted RBP22.82■■□□□ 1.24
CCDC12-210ENST00000604181 NFKBIEO00221 500 aa22.81■■□□□ 1.24
CCDC12-210ENST00000604181 LMNB1P20700 586 aa22.8■■□□□ 1.24
CCDC12-210ENST00000604181 TBC1D9BQ66K14 1250 aa22.8■■□□□ 1.24
CCDC12-210ENST00000604181 CCDC24Q8N4L8 307 aa22.8■■□□□ 1.24
CCDC12-210ENST00000604181 TTLL6Q8N841 843 aa22.8■■□□□ 1.24
CCDC12-210ENST00000604181 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
CCDC12-210ENST00000604181 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
CCDC12-210ENST00000604181 TIAM2Q8IVF5 1701 aa22.79■■□□□ 1.24
CCDC12-210ENST00000604181 COL11A2P13942 1736 aaPredicted RBP22.78■■□□□ 1.24
CCDC12-210ENST00000604181 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
CCDC12-210ENST00000604181 SCN7AQ01118 1682 aa22.77■■□□□ 1.24
CCDC12-210ENST00000604181 HEG1Q9ULI3 1381 aa22.77■■□□□ 1.24
CCDC12-210ENST00000604181 GLTPD2A6NH11 291 aa22.77■■□□□ 1.24
CCDC12-210ENST00000604181 ZNF790Q6PG37 636 aa22.77■■□□□ 1.24
CCDC12-210ENST00000604181 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.24
CCDC12-210ENST00000604181 TBC1D2BQ9UPU7 963 aa22.77■■□□□ 1.24
CCDC12-210ENST00000604181 ZC3H4Q9UPT8 1303 aaKnown RBP22.77■■□□□ 1.24
CCDC12-210ENST00000604181 H0YIN7 160 aa22.76■■□□□ 1.23
CCDC12-210ENST00000604181 STARD3NLO95772 234 aa22.76■■□□□ 1.23
CCDC12-210ENST00000604181 SMC1BQ8NDV3 1235 aa22.76■■□□□ 1.23
CCDC12-210ENST00000604181 POTECB2RU33 542 aa22.75■■□□□ 1.23
CCDC12-210ENST00000604181 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
CCDC12-210ENST00000604181 KCNQ3O43525 872 aa22.75■■□□□ 1.23
CCDC12-210ENST00000604181 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
CCDC12-210ENST00000604181 A1BGP04217 495 aa22.74■■□□□ 1.23
CCDC12-210ENST00000604181 COL13A1Q5TAT6 717 aaPredicted RBP22.74■■□□□ 1.23
CCDC12-210ENST00000604181 PRR5LQ6MZQ0 368 aa22.74■■□□□ 1.23
CCDC12-210ENST00000604181 ZNF219Q9P2Y4 722 aaPredicted RBP22.74■■□□□ 1.23
CCDC12-210ENST00000604181 ZNF330Q9Y3S2 320 aaPredicted RBP22.74■■□□□ 1.23
CCDC12-210ENST00000604181 TEFQ10587 303 aa22.73■■□□□ 1.23
CCDC12-210ENST00000604181 ZNF622Q969S3 477 aaKnown RBP eCLIP22.73■■□□□ 1.235e-8■□□□□ 11.2
CCDC12-210ENST00000604181 A0A087WZG4 1122 aa22.72■■□□□ 1.23
CCDC12-210ENST00000604181 VEGFAP15692 232 aaPredicted RBP22.72■■□□□ 1.23
CCDC12-210ENST00000604181 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
CCDC12-210ENST00000604181 FER1L6Q2WGJ9 1857 aa22.72■■□□□ 1.23
CCDC12-210ENST00000604181 CEMIPQ8WUJ3 1361 aa22.72■■□□□ 1.23
CCDC12-210ENST00000604181 C21orf2O43822 256 aa22.71■■□□□ 1.23
CCDC12-210ENST00000604181 CAMTA2O94983 1202 aa22.71■■□□□ 1.23
CCDC12-210ENST00000604181 GAS2L2Q8NHY3 880 aa22.71■■□□□ 1.23
CCDC12-210ENST00000604181 BRIP1Q9BX63 1249 aa22.71■■□□□ 1.23
CCDC12-210ENST00000604181 NPC1L1Q9UHC9 1359 aa22.71■■□□□ 1.23
CCDC12-210ENST00000604181 IL6STP40189 918 aaPredicted RBP22.7■■□□□ 1.22
CCDC12-210ENST00000604181 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
CCDC12-210ENST00000604181 SLX4Q8IY92 1834 aa22.7■■□□□ 1.22
CCDC12-210ENST00000604181 DICER1Q9UPY3 1922 aaKnown RBP22.69■■□□□ 1.22
CCDC12-210ENST00000604181 PRAMEF22A3QJZ6 481 aa22.68■■□□□ 1.22
CCDC12-210ENST00000604181 FMNL2Q96PY5 1086 aa22.68■■□□□ 1.22
CCDC12-210ENST00000604181 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
CCDC12-210ENST00000604181 CACNA1SQ13698 1873 aa22.68■■□□□ 1.22
CCDC12-210ENST00000604181 BCORQ6W2J9 1755 aa22.68■■□□□ 1.22
CCDC12-210ENST00000604181 PDE6BP35913 854 aa22.67■■□□□ 1.22
CCDC12-210ENST00000604181 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
CCDC12-210ENST00000604181 USP16Q9Y5T5 823 aa22.67■■□□□ 1.22
CCDC12-210ENST00000604181 PRKAR2BP31323 418 aa22.66■■□□□ 1.22
CCDC12-210ENST00000604181 ERFEQ4G0M1 354 aa22.65■■□□□ 1.22
CCDC12-210ENST00000604181 BTBD11A6QL63 1104 aa22.64■■□□□ 1.21
CCDC12-210ENST00000604181 POTEIP0CG38 1075 aa22.64■■□□□ 1.21
CCDC12-210ENST00000604181 POTEJP0CG39 1038 aa22.64■■□□□ 1.21
CCDC12-210ENST00000604181 DZIP3Q86Y13 1208 aaKnown RBP22.64■■□□□ 1.21
CCDC12-210ENST00000604181 CNBD1Q8NA66 436 aa22.64■■□□□ 1.21
CCDC12-210ENST00000604181 SETDB2Q96T68 719 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms