RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PHAXQ9H814 394 aaKnown RBP22.08■■□□□ 1.13
PPFIA3-207ENST00000602716 USP16Q9Y5T5 823 aa22.07■■□□□ 1.12
PPFIA3-207ENST00000602716 KCNQ2O43526 872 aa22.07■■□□□ 1.12
PPFIA3-207ENST00000602716 ARHGAP45Q92619 1136 aa22.07■■□□□ 1.12
PPFIA3-207ENST00000602716 PIP4K2AP48426 406 aaPredicted RBP22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 FLIIQ13045 1269 aa22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 MVPQ14764 893 aaKnown RBP22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 SEPT12Q8IYM1 358 aa22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 LAMB4A4D0S4 1761 aa22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 F6X3S4 739 aa22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 ONECUT3O60422 494 aaPredicted RBP22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
PPFIA3-207ENST00000602716 SNRPA1P09661 255 aaKnown RBP22.05■■□□□ 1.12
PPFIA3-207ENST00000602716 ITPRIPQ8IWB1 547 aa22.05■■□□□ 1.12
PPFIA3-207ENST00000602716 PDIA6Q15084 440 aa22.04■■□□□ 1.12
PPFIA3-207ENST00000602716 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
PPFIA3-207ENST00000602716 SLC4A9Q96Q91 983 aa22.04■■□□□ 1.12
PPFIA3-207ENST00000602716 API5Q9BZZ5 524 aaKnown RBP22.04■■□□□ 1.12
PPFIA3-207ENST00000602716 PTPRCP08575 1304 aa22.04■■□□□ 1.12
PPFIA3-207ENST00000602716 FKBP5Q13451 457 aaPredicted RBP22.01■■□□□ 1.11
PPFIA3-207ENST00000602716 RBM42Q9BTD8 480 aaKnown RBP22.01■■□□□ 1.11
PPFIA3-207ENST00000602716 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
PPFIA3-207ENST00000602716 MS4A1P11836 297 aa22■■□□□ 1.11
PPFIA3-207ENST00000602716 RGS17Q9UGC6 210 aaPredicted RBP22■■□□□ 1.11
PPFIA3-207ENST00000602716 LRP10Q7Z4F1 713 aa21.99■■□□□ 1.11
PPFIA3-207ENST00000602716 DNAJC10Q8IXB1 793 aa21.99■■□□□ 1.11
PPFIA3-207ENST00000602716 MYL6BP14649 208 aa21.99■■□□□ 1.11
PPFIA3-207ENST00000602716 ZNF772Q68DY9 489 aaPredicted RBP21.99■■□□□ 1.11
PPFIA3-207ENST00000602716 DDX21Q9NR30 783 aaKnown RBP eCLIP21.99■■□□□ 1.11
PPFIA3-207ENST00000602716 ADCY9O60503 1353 aa21.98■■□□□ 1.11
PPFIA3-207ENST00000602716 TJP1Q07157 1748 aa21.98■■□□□ 1.11
PPFIA3-207ENST00000602716 KAT6BQ8WYB5 2073 aa21.98■■□□□ 1.11
PPFIA3-207ENST00000602716 NHSQ6T4R5 1651 aa21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 NBPF26B4DH59 902 aa21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 NBPF14Q5TI25 921 aa21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 NBPF10Q6P3W6 841 aaKnown RBP21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 NBPF15Q8N660 670 aa21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 BRWD3Q6RI45 1802 aa21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 SLC4A10Q6U841 1118 aa21.97■■□□□ 1.11
PPFIA3-207ENST00000602716 A1BGP04217 495 aa21.96■■□□□ 1.11
PPFIA3-207ENST00000602716 PALLDQ8WX93 1383 aa21.96■■□□□ 1.11
PPFIA3-207ENST00000602716 INTS3Q68E01 1043 aaKnown RBP21.96■■□□□ 1.11
PPFIA3-207ENST00000602716 DDX19BQ9UMR2 479 aa21.96■■□□□ 1.11
PPFIA3-207ENST00000602716 PCDHB15Q9Y5E8 787 aa21.95■■□□□ 1.1
PPFIA3-207ENST00000602716 RBM6P78332 1123 aaKnown RBP21.94■■□□□ 1.1
PPFIA3-207ENST00000602716 AIMP1Q12904 312 aaKnown RBP21.94■■□□□ 1.1
PPFIA3-207ENST00000602716 CACNA1FO60840 1977 aa21.94■■□□□ 1.1
PPFIA3-207ENST00000602716 XAGE3Q8WTP9 111 aa21.94■■□□□ 1.1
PPFIA3-207ENST00000602716 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
PPFIA3-207ENST00000602716 PI4KAP2A4QPH2 592 aa21.93■■□□□ 1.1
PPFIA3-207ENST00000602716 ZBTB7BO15156 539 aaPredicted RBP21.93■■□□□ 1.1
PPFIA3-207ENST00000602716 VSIG10Q8N0Z9 540 aa21.93■■□□□ 1.1
PPFIA3-207ENST00000602716 PI4KAP1Q8N8J0 262 aa21.93■■□□□ 1.1
PPFIA3-207ENST00000602716 ZBTB40Q9NUA8 1239 aa21.93■■□□□ 1.1
PPFIA3-207ENST00000602716 POTEAQ6S8J7 498 aa21.92■■□□□ 1.1
PPFIA3-207ENST00000602716 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
PPFIA3-207ENST00000602716 C1orf115Q9H7X2 142 aa21.92■■□□□ 1.1
PPFIA3-207ENST00000602716 BTAF1O14981 1849 aa21.92■■□□□ 1.1
PPFIA3-207ENST00000602716 PXDNLA1KZ92 1463 aa21.92■■□□□ 1.1
PPFIA3-207ENST00000602716 EP400Q96L91 3159 aa21.92■■□□□ 1.1
PPFIA3-207ENST00000602716 N4BP2Q86UW6 1770 aaPredicted RBP21.91■■□□□ 1.1
PPFIA3-207ENST00000602716 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
PPFIA3-207ENST00000602716 ITPK1Q13572 414 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 KRT27Q7Z3Y8 459 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 MEIS3Q99687 375 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 SBF2Q86WG5 1849 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 KCNQ4P56696 695 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 SIK1P57059 783 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 DNAAF4Q8WXU2 420 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 MAP3K2Q9Y2U5 619 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 ERBB4Q15303 1308 aa21.9■■□□□ 1.1
PPFIA3-207ENST00000602716 CYP19A1P11511 503 aaPredicted RBP21.89■■□□□ 1.1
PPFIA3-207ENST00000602716 NOP58Q9Y2X3 529 aaKnown RBP21.89■■□□□ 1.1
PPFIA3-207ENST00000602716 KDM2BQ8NHM5 1336 aa21.89■■□□□ 1.09
PPFIA3-207ENST00000602716 IGHDP01880 384 aa21.89■■□□□ 1.09
PPFIA3-207ENST00000602716 TTLL7Q6ZT98 887 aa21.88■■□□□ 1.09
PPFIA3-207ENST00000602716 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
PPFIA3-207ENST00000602716 CCT4P50991 539 aaKnown RBP21.87■■□□□ 1.09
PPFIA3-207ENST00000602716 ZBTB1Q9Y2K1 713 aa21.87■■□□□ 1.09
PPFIA3-207ENST00000602716 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
PPFIA3-207ENST00000602716 BEND3Q5T5X7 828 aa21.87■■□□□ 1.09
PPFIA3-207ENST00000602716 KSR2Q6VAB6 950 aa21.87■■□□□ 1.09
PPFIA3-207ENST00000602716 RXRBP28702 533 aa21.86■■□□□ 1.09
PPFIA3-207ENST00000602716 ATP10DQ9P241 1426 aa21.86■■□□□ 1.09
PPFIA3-207ENST00000602716 ANP32AP39687 249 aaKnown RBP21.85■■□□□ 1.09
PPFIA3-207ENST00000602716 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
PPFIA3-207ENST00000602716 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
PPFIA3-207ENST00000602716 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
PPFIA3-207ENST00000602716 TEX13AQ9BXU3 409 aaPredicted RBP21.85■■□□□ 1.09
PPFIA3-207ENST00000602716 STARD3NLO95772 234 aa21.84■■□□□ 1.09
PPFIA3-207ENST00000602716 CWF19L2Q2TBE0 894 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-207ENST00000602716 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
PPFIA3-207ENST00000602716 NUP188Q5SRE5 1749 aa21.83■■□□□ 1.09
PPFIA3-207ENST00000602716 AAMPQ13685 434 aa21.83■■□□□ 1.09
PPFIA3-207ENST00000602716 IPO9Q96P70 1041 aaKnown RBP21.83■■□□□ 1.09
PPFIA3-207ENST00000602716 SRCIN1Q9C0H9 1055 aa21.83■■□□□ 1.09
PPFIA3-207ENST00000602716 COL5A3P25940 1745 aaPredicted RBP21.83■■□□□ 1.08
PPFIA3-207ENST00000602716 DDX58O95786 925 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 RIC3Q7Z5B4 369 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms