RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 POLR3GLQ9BT43 218 aa19.48■□□□□ 0.71
HCG18-245ENST00000602550 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
HCG18-245ENST00000602550 AFDNP55196 1824 aaKnown RBP19.47■□□□□ 0.71
HCG18-245ENST00000602550 NFIXQ14938 502 aa19.47■□□□□ 0.71
HCG18-245ENST00000602550 DPY19L2Q6NUT2 758 aa19.47■□□□□ 0.71
HCG18-245ENST00000602550 ADAMTS7Q9UKP4 1686 aa19.46■□□□□ 0.71
HCG18-245ENST00000602550 SERPINB2P05120 415 aa19.46■□□□□ 0.71
HCG18-245ENST00000602550 SULT6B1Q6IMI4 303 aa19.46■□□□□ 0.71
HCG18-245ENST00000602550 AEBP1Q8IUX7 1158 aa19.46■□□□□ 0.71
HCG18-245ENST00000602550 SCN11AQ9UI33 1791 aa19.45■□□□□ 0.7
HCG18-245ENST00000602550 H0YIN7 160 aa19.45■□□□□ 0.7
HCG18-245ENST00000602550 CYP19A1P11511 503 aaPredicted RBP19.44■□□□□ 0.7
HCG18-245ENST00000602550 AKAP4Q5JQC9 854 aa19.44■□□□□ 0.7
HCG18-245ENST00000602550 C2CD5Q86YS7 1000 aa19.44■□□□□ 0.7
HCG18-245ENST00000602550 SLC52A2Q9HAB3 445 aa19.44■□□□□ 0.7
HCG18-245ENST00000602550 NRXN2Q9P2S2 1712 aa19.43■□□□□ 0.7
HCG18-245ENST00000602550 DLEC1Q9Y238 1755 aa19.43■□□□□ 0.7
HCG18-245ENST00000602550 COL15A1P39059 1388 aa19.43■□□□□ 0.7
HCG18-245ENST00000602550 MORC1Q86VD1 984 aa19.42■□□□□ 0.7
HCG18-245ENST00000602550 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
HCG18-245ENST00000602550 PDZRN3Q9UPQ7 1066 aa19.42■□□□□ 0.7
HCG18-245ENST00000602550 POTECB2RU33 542 aa19.41■□□□□ 0.7
HCG18-245ENST00000602550 NFKBIEO00221 500 aa19.41■□□□□ 0.7
HCG18-245ENST00000602550 PANK3Q9H999 370 aa19.41■□□□□ 0.7
HCG18-245ENST00000602550 TIAM2Q8IVF5 1701 aa19.4■□□□□ 0.7
HCG18-245ENST00000602550 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
HCG18-245ENST00000602550 BCL2L12Q9HB09 334 aa19.4■□□□□ 0.7
HCG18-245ENST00000602550 ZBTB1Q9Y2K1 713 aa19.4■□□□□ 0.7
HCG18-245ENST00000602550 SLC39A6Q13433 755 aa19.39■□□□□ 0.69
HCG18-245ENST00000602550 LGR6Q9HBX8 967 aa19.39■□□□□ 0.69
HCG18-245ENST00000602550 CREBZFQ9NS37 354 aa19.39■□□□□ 0.69
HCG18-245ENST00000602550 DICER1Q9UPY3 1922 aaKnown RBP19.39■□□□□ 0.69
HCG18-245ENST00000602550 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
HCG18-245ENST00000602550 IL13P35225 146 aa19.38■□□□□ 0.69
HCG18-245ENST00000602550 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
HCG18-245ENST00000602550 A0A087WZG4 1122 aa19.37■□□□□ 0.69
HCG18-245ENST00000602550 PDE6BP35913 854 aa19.37■□□□□ 0.69
HCG18-245ENST00000602550 CHADLQ6NUI6 762 aa19.37■□□□□ 0.69
HCG18-245ENST00000602550 ZNF622Q969S3 477 aaKnown RBP eCLIP19.37■□□□□ 0.69
HCG18-245ENST00000602550 BICDL1Q6ZP65 573 aa19.36■□□□□ 0.69
HCG18-245ENST00000602550 BRIP1Q9BX63 1249 aa19.36■□□□□ 0.69
HCG18-245ENST00000602550 STARD3NLO95772 234 aa19.35■□□□□ 0.69
HCG18-245ENST00000602550 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
HCG18-245ENST00000602550 C21orf2O43822 256 aa19.34■□□□□ 0.69
HCG18-245ENST00000602550 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
HCG18-245ENST00000602550 MKRN1Q9UHC7 482 aaKnown RBP19.34■□□□□ 0.69
HCG18-245ENST00000602550 FER1L6Q2WGJ9 1857 aa19.34■□□□□ 0.69
HCG18-245ENST00000602550 VIRMAQ69YN4 1812 aaKnown RBP19.34■□□□□ 0.69
HCG18-245ENST00000602550 MRC1P22897 1456 aa19.34■□□□□ 0.69
HCG18-245ENST00000602550 CARMIL3Q8ND23 1372 aa19.33■□□□□ 0.69
HCG18-245ENST00000602550 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
HCG18-245ENST00000602550 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
HCG18-245ENST00000602550 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
HCG18-245ENST00000602550 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
HCG18-245ENST00000602550 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
HCG18-245ENST00000602550 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
HCG18-245ENST00000602550 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
HCG18-245ENST00000602550 CNKSR1Q969H4 720 aa19.31■□□□□ 0.68
HCG18-245ENST00000602550 TEX13AQ9BXU3 409 aaPredicted RBP19.31■□□□□ 0.68
HCG18-245ENST00000602550 PRDM10Q9NQV6 1147 aa19.31■□□□□ 0.68
HCG18-245ENST00000602550 ANKRD31Q8N7Z5 1873 aa19.31■□□□□ 0.68
HCG18-245ENST00000602550 IQCA1LA6NCM1 817 aa19.3■□□□□ 0.68
HCG18-245ENST00000602550 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
HCG18-245ENST00000602550 EIF4G2P78344 907 aaKnown RBP eCLIP19.3■□□□□ 0.68
HCG18-245ENST00000602550 PRR5LQ6MZQ0 368 aa19.3■□□□□ 0.68
HCG18-245ENST00000602550 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
HCG18-245ENST00000602550 AIDAQ96BJ3 306 aa19.29■□□□□ 0.68
HCG18-245ENST00000602550 CNTNAP1P78357 1384 aa19.29■□□□□ 0.68
HCG18-245ENST00000602550 NPHP1O15259 732 aa19.28■□□□□ 0.68
HCG18-245ENST00000602550 FOXN1O15353 648 aa19.28■□□□□ 0.68
HCG18-245ENST00000602550 HMOX1P09601 288 aa19.28■□□□□ 0.68
HCG18-245ENST00000602550 MTHFSDQ2M296 383 aaKnown RBP19.28■□□□□ 0.68
HCG18-245ENST00000602550 STYK1Q6J9G0 422 aa19.28■□□□□ 0.68
HCG18-245ENST00000602550 LDHDQ86WU2 507 aa19.28■□□□□ 0.68
HCG18-245ENST00000602550 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.68
HCG18-245ENST00000602550 POTEIP0CG38 1075 aa19.27■□□□□ 0.68
HCG18-245ENST00000602550 POTEJP0CG39 1038 aa19.27■□□□□ 0.68
HCG18-245ENST00000602550 CTCFP49711 727 aaPredicted RBP19.27■□□□□ 0.68
HCG18-245ENST00000602550 SETDB2Q96T68 719 aa19.27■□□□□ 0.68
HCG18-245ENST00000602550 TBC1D2BQ9UPU7 963 aa19.27■□□□□ 0.68
HCG18-245ENST00000602550 PASKQ96RG2 1323 aa19.26■□□□□ 0.67
HCG18-245ENST00000602550 SCN4AP35499 1836 aa19.26■□□□□ 0.67
HCG18-245ENST00000602550 IL6STP40189 918 aaPredicted RBP19.26■□□□□ 0.67
HCG18-245ENST00000602550 ST5P78524 1137 aa19.26■□□□□ 0.67
HCG18-245ENST00000602550 CNBD1Q8NA66 436 aa19.26■□□□□ 0.67
HCG18-245ENST00000602550 MASTLQ96GX5 879 aa19.26■□□□□ 0.67
HCG18-245ENST00000602550 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
HCG18-245ENST00000602550 SLX4Q8IY92 1834 aa19.25■□□□□ 0.67
HCG18-245ENST00000602550 TMEM88BA6NKF7 163 aa19.25■□□□□ 0.67
HCG18-245ENST00000602550 HSPA5P11021 654 aaKnown RBP19.25■□□□□ 0.67
HCG18-245ENST00000602550 CCDC24Q8N4L8 307 aa19.25■□□□□ 0.67
HCG18-245ENST00000602550 L3MBTL3Q96JM7 780 aaPredicted RBP19.25■□□□□ 0.67
HCG18-245ENST00000602550 SRGNP10124 158 aa19.24■□□□□ 0.67
HCG18-245ENST00000602550 TEFQ10587 303 aa19.24■□□□□ 0.67
HCG18-245ENST00000602550 PRPF40BQ6NWY9 871 aaKnown RBP19.24■□□□□ 0.67
HCG18-245ENST00000602550 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
HCG18-245ENST00000602550 ZNF496Q96IT1 587 aaPredicted RBP19.24■□□□□ 0.67
HCG18-245ENST00000602550 TAF1DQ9H5J8 278 aaPredicted RBP19.24■□□□□ 0.67
HCG18-245ENST00000602550 COL11A2P13942 1736 aaPredicted RBP19.23■□□□□ 0.67
HCG18-245ENST00000602550 HEG1Q9ULI3 1381 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms