RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 CBFA2T2O43439 604 aa14.15□□□□□ -0.14
PTPN23-206ENST00000602307 CCT2P78371 535 aaKnown RBP14.15□□□□□ -0.14
PTPN23-206ENST00000602307 WASF1Q92558 559 aa14.15□□□□□ -0.14
PTPN23-206ENST00000602307 ACEP12821 1306 aa14.15□□□□□ -0.14
PTPN23-206ENST00000602307 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
PTPN23-206ENST00000602307 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
PTPN23-206ENST00000602307 LIMCH1Q9UPQ0 1083 aa14.15□□□□□ -0.14
PTPN23-206ENST00000602307 RALGAPBQ86X10 1494 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 PTPRCP08575 1304 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 UQCRHLA0A096LP55 91 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 UQCRHP07919 91 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 BMP2KQ9NSY1 1161 aaPredicted RBP14.14□□□□□ -0.15
PTPN23-206ENST00000602307 ECHDC1Q9NTX5 307 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 TFIP11Q9UBB9 837 aaKnown RBP14.14□□□□□ -0.15
PTPN23-206ENST00000602307 ZSCAN30Q86W11 494 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 C8orf76Q96K31 380 aa14.14□□□□□ -0.15
PTPN23-206ENST00000602307 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
PTPN23-206ENST00000602307 CAVIN4Q5BKX8 364 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 UBE3BQ7Z3V4 1068 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 TBC1D32Q96NH3 1257 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 SCAND2PQ9GZW5 306 aaPredicted RBP14.13□□□□□ -0.15
PTPN23-206ENST00000602307 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
PTPN23-206ENST00000602307 BMP2KLQ5H9B9 411 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 KLHL10Q6JEL2 608 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 SYCP2Q9BX26 1530 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 GOLIM4O00461 696 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 RANBP6O60518 1105 aaKnown RBP14.13□□□□□ -0.15
PTPN23-206ENST00000602307 MKNK2Q9HBH9 465 aa14.13□□□□□ -0.15
PTPN23-206ENST00000602307 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
PTPN23-206ENST00000602307 CHRNA2Q15822 529 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 FAM135AQ9P2D6 1515 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 ZNF213O14771 459 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 CCDC181Q5TID7 509 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 ZNF652Q9Y2D9 606 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 MAGI3Q5TCQ9 1506 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 SMTNL1A8MU46 457 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 H0YHG0 523 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 MPHOSPH10O00566 681 aaKnown RBP14.12□□□□□ -0.15
PTPN23-206ENST00000602307 POLR3DP05423 398 aaPredicted RBP14.12□□□□□ -0.15
PTPN23-206ENST00000602307 MAP3K12Q12852 859 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
PTPN23-206ENST00000602307 ZNF76P36508 570 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 EIF5P55010 431 aaKnown RBP14.12□□□□□ -0.15
PTPN23-206ENST00000602307 MEIS3Q99687 375 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 TNNQ9UQP3 1299 aa14.12□□□□□ -0.15
PTPN23-206ENST00000602307 ZPR1O75312 459 aa14.11□□□□□ -0.15
PTPN23-206ENST00000602307 ANKIB1Q9P2G1 1089 aa14.11□□□□□ -0.15
PTPN23-206ENST00000602307 C8orf34Q49A92 452 aa14.11□□□□□ -0.15
PTPN23-206ENST00000602307 LUC7LQ9NQ29 371 aaKnown RBP14.11□□□□□ -0.15
PTPN23-206ENST00000602307 TTC21BQ7Z4L5 1316 aa14.11□□□□□ -0.15
PTPN23-206ENST00000602307 CCDC183Q5T5S1 534 aa14.11□□□□□ -0.15
PTPN23-206ENST00000602307 MYO6Q9UM54 1294 aa14.11□□□□□ -0.15
PTPN23-206ENST00000602307 HAND2P61296 217 aa14.1□□□□□ -0.15
PTPN23-206ENST00000602307 SEPT11Q9NVA2 429 aaKnown RBP14.1□□□□□ -0.15
PTPN23-206ENST00000602307 LDHAL6AQ6ZMR3 332 aa14.1□□□□□ -0.15
PTPN23-206ENST00000602307 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
PTPN23-206ENST00000602307 EVI5LQ96CN4 794 aa14.1□□□□□ -0.15
PTPN23-206ENST00000602307 ANKRD18BA2A2Z9 1011 aa14.1□□□□□ -0.15
PTPN23-206ENST00000602307 DHX29Q7Z478 1369 aaKnown RBP14.1□□□□□ -0.15
PTPN23-206ENST00000602307 GOLGA8BA8MQT2 603 aa14.1□□□□□ -0.15
PTPN23-206ENST00000602307 RRP9O43818 475 aaKnown RBP14.1□□□□□ -0.15
PTPN23-206ENST00000602307 IFIT3O14879 490 aaKnown RBP14.09□□□□□ -0.15
PTPN23-206ENST00000602307 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
PTPN23-206ENST00000602307 USP25Q9UHP3 1055 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 FANCAO15360 1455 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 PZPP20742 1482 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 EPB41L2O43491 1005 aaKnown RBP14.09□□□□□ -0.15
PTPN23-206ENST00000602307 TTC22Q5TAA0 569 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 SLC12A7Q9Y666 1083 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 IFNL2Q8IZJ0 200 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
PTPN23-206ENST00000602307 HMGB1P09429 215 aaKnown RBP14.09□□□□□ -0.15
PTPN23-206ENST00000602307 ARHGAP29Q52LW3 1261 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 CCDC144CPQ8IYA2 1237 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 NSD2O96028 1365 aa14.09□□□□□ -0.15
PTPN23-206ENST00000602307 SFPQP23246 707 aaKnown RBP eCLIP14.08□□□□□ -0.15
PTPN23-206ENST00000602307 GJB2P29033 226 aa14.08□□□□□ -0.15
PTPN23-206ENST00000602307 CCDC196A0A1B0GTZ2 297 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 SLC5A1P13866 664 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 RDXP35241 583 aaKnown RBP14.08□□□□□ -0.16
PTPN23-206ENST00000602307 ZRANB1Q9UGI0 708 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 CENPHQ9H3R5 247 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 ANO10Q9NW15 660 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.16
PTPN23-206ENST00000602307 TSPYL1Q9H0U9 437 aa14.08□□□□□ -0.16
PTPN23-206ENST00000602307 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 EXOC5O00471 708 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 SDSP20132 328 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 PANK2Q9BZ23 570 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 DUOX2Q9NRD8 1548 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 IL16Q14005 1332 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 GOLGA8AA7E2F4 631 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 BIN1O00499 593 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms