RNA–Protein interactions for RNA: ENST00000602285.1

NSD1-215, Transcript of nuclear receptor binding SET domain protein 1, human

TSL 1 (best)

Gene NSD1, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSD1-215	ENST00000602285	ERBB4	Q15303	1308 aa		28.88	■■■□□ 2.21
NSD1-215	ENST00000602285	MARCH10	Q8NA82	808 aa	Predicted RBP	28.87	■■■□□ 2.21
NSD1-215	ENST00000602285	PIGB	Q92521	554 aa		28.87	■■■□□ 2.21
NSD1-215	ENST00000602285	GLI3	P10071	1580 aa		28.87	■■■□□ 2.21
NSD1-215	ENST00000602285	CCT4	P50991	539 aa	Known RBP	28.86	■■■□□ 2.21
NSD1-215	ENST00000602285	G2E3	Q7L622	706 aa		28.86	■■■□□ 2.21
NSD1-215	ENST00000602285	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.86	■■■□□ 2.21
NSD1-215	ENST00000602285	VSIG10	Q8N0Z9	540 aa		28.86	■■■□□ 2.21
NSD1-215	ENST00000602285	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.86	■■■□□ 2.21
NSD1-215	ENST00000602285	DDX58	O95786	925 aa	Known RBP	28.83	■■■□□ 2.21
NSD1-215	ENST00000602285	SYTL4	Q96C24	671 aa	Predicted RBP	28.83	■■■□□ 2.21
NSD1-215	ENST00000602285	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.82	■■■□□ 2.2
NSD1-215	ENST00000602285	PRAMEF22	A3QJZ6	481 aa		28.81	■■■□□ 2.2
NSD1-215	ENST00000602285	PRIM1	P49642	420 aa	Known RBP	28.81	■■■□□ 2.2
NSD1-215	ENST00000602285	ONECUT3	O60422	494 aa	Predicted RBP	28.8	■■■□□ 2.2
NSD1-215	ENST00000602285	ZNF772	Q68DY9	489 aa	Predicted RBP	28.8	■■■□□ 2.2
NSD1-215	ENST00000602285	QTRT2	Q9H974	415 aa	Known RBP	28.8	■■■□□ 2.2
NSD1-215	ENST00000602285	ATG3	Q9NT62	314 aa		28.8	■■■□□ 2.2
NSD1-215	ENST00000602285	ZBTB40	Q9NUA8	1239 aa		28.8	■■■□□ 2.2
NSD1-215	ENST00000602285	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.79	■■■□□ 2.2
NSD1-215	ENST00000602285	ZBTB7B	O15156	539 aa	Predicted RBP	28.78	■■■□□ 2.2
NSD1-215	ENST00000602285	PTCD1	O75127	700 aa	Known RBP	28.78	■■■□□ 2.2
NSD1-215	ENST00000602285	SLC4A10	Q6U841	1118 aa		28.78	■■■□□ 2.2
NSD1-215	ENST00000602285	FBXO41	Q8TF61	875 aa		28.78	■■■□□ 2.2
NSD1-215	ENST00000602285	PHAX	Q9H814	394 aa	Known RBP	28.78	■■■□□ 2.2
NSD1-215	ENST00000602285	USP16	Q9Y5T5	823 aa		28.78	■■■□□ 2.2
NSD1-215	ENST00000602285	ASAP1	Q9ULH1	1129 aa		28.77	■■■□□ 2.2
NSD1-215	ENST00000602285	SMARCC1	Q92922	1105 aa	Predicted RBP	28.77	■■■□□ 2.2
NSD1-215	ENST00000602285	RWDD1	Q9H446	243 aa	Predicted RBP	28.77	■■■□□ 2.2
NSD1-215	ENST00000602285		F6X3S4	739 aa		28.75	■■■□□ 2.19
NSD1-215	ENST00000602285	PDIA6	Q15084	440 aa		28.75	■■■□□ 2.19
NSD1-215	ENST00000602285	DNAAF4	Q8WXU2	420 aa		28.75	■■■□□ 2.19
NSD1-215	ENST00000602285	ATP10D	Q9P241	1426 aa		28.74	■■■□□ 2.19
NSD1-215	ENST00000602285	KDM2B	Q8NHM5	1336 aa		28.74	■■■□□ 2.19
NSD1-215	ENST00000602285	STARD3NL	O95772	234 aa		28.74	■■■□□ 2.19
NSD1-215	ENST00000602285	ACSBG1	Q96GR2	724 aa		28.74	■■■□□ 2.19
NSD1-215	ENST00000602285	RBM42	Q9BTD8	480 aa	Known RBP	28.74	■■■□□ 2.19
NSD1-215	ENST00000602285	PROSER3	Q2NL68	480 aa		28.73	■■■□□ 2.19
NSD1-215	ENST00000602285	KSR2	Q6VAB6	950 aa		28.73	■■■□□ 2.19
NSD1-215	ENST00000602285	ANXA1	P04083	346 aa		28.72	■■■□□ 2.19
NSD1-215	ENST00000602285	SEPT12	Q8IYM1	358 aa		28.72	■■■□□ 2.19
NSD1-215	ENST00000602285	PI4KAP2	A4QPH2	592 aa		28.7	■■■□□ 2.19
NSD1-215	ENST00000602285	MYL6B	P14649	208 aa		28.7	■■■□□ 2.19
NSD1-215	ENST00000602285	PI4KAP1	Q8N8J0	262 aa		28.7	■■■□□ 2.19
NSD1-215	ENST00000602285	SRCIN1	Q9C0H9	1055 aa		28.7	■■■□□ 2.19
NSD1-215	ENST00000602285	PCDHB15	Q9Y5E8	787 aa		28.7	■■■□□ 2.19
NSD1-215	ENST00000602285	GNAI3	P08754	354 aa		28.69	■■■□□ 2.18
NSD1-215	ENST00000602285	ADCY9	O60503	1353 aa		28.69	■■■□□ 2.18
NSD1-215	ENST00000602285	HDAC1	Q13547	482 aa	Predicted RBP	28.69	■■■□□ 2.18
NSD1-215	ENST00000602285	NHS	Q6T4R5	1651 aa		28.68	■■■□□ 2.18
NSD1-215	ENST00000602285	CIC	Q96RK0	1608 aa	Predicted RBP	28.68	■■■□□ 2.18
NSD1-215	ENST00000602285	XAGE3	Q8WTP9	111 aa		28.68	■■■□□ 2.18
NSD1-215	ENST00000602285	KAT6B	Q8WYB5	2073 aa		28.67	■■■□□ 2.18
NSD1-215	ENST00000602285	ALDH1L1	O75891	902 aa		28.67	■■■□□ 2.18
NSD1-215	ENST00000602285	RIC3	Q7Z5B4	369 aa		28.67	■■■□□ 2.18
NSD1-215	ENST00000602285	MAP3K2	Q9Y2U5	619 aa		28.67	■■■□□ 2.18
NSD1-215	ENST00000602285	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	RBM6	P78332	1123 aa	Known RBP	28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	NEXN	Q0ZGT2	675 aa		28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	AIMP1	Q12904	312 aa	Known RBP	28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	COPS6	Q7L5N1	327 aa		28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	DNAJC10	Q8IXB1	793 aa		28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	HDAC5	Q9UQL6	1122 aa		28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	PALLD	Q8WX93	1383 aa		28.66	■■■□□ 2.18
NSD1-215	ENST00000602285	LRP10	Q7Z4F1	713 aa		28.65	■■■□□ 2.18
NSD1-215	ENST00000602285	BEND3	Q5T5X7	828 aa		28.64	■■■□□ 2.18
NSD1-215	ENST00000602285	ANKRD13D	Q6ZTN6	518 aa		28.64	■■■□□ 2.18
NSD1-215	ENST00000602285	ZNF831	Q5JPB2	1677 aa		28.63	■■■□□ 2.17
NSD1-215	ENST00000602285	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.62	■■■□□ 2.17
NSD1-215	ENST00000602285	LINS1	Q8NG48	757 aa		28.62	■■■□□ 2.17
NSD1-215	ENST00000602285	MEIS3	Q99687	375 aa		28.62	■■■□□ 2.17
NSD1-215	ENST00000602285	TJP1	Q07157	1748 aa		28.62	■■■□□ 2.17
NSD1-215	ENST00000602285	NBPF26	B4DH59	902 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	IGHD	P01880	384 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	A1BG	P04217	495 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	GNAI2	P04899	355 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	NBPF14	Q5TI25	921 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	NBPF10	Q6P3W6	841 aa	Known RBP	28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	NBPF15	Q8N660	670 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	PLBD2	Q8NHP8	589 aa		28.61	■■■□□ 2.17
NSD1-215	ENST00000602285	LOC102724428	A0A0B4J2F2	783 aa		28.6	■■■□□ 2.17
NSD1-215	ENST00000602285	SIK1	P57059	783 aa		28.6	■■■□□ 2.17
NSD1-215	ENST00000602285	KCNQ2	O43526	872 aa		28.6	■■■□□ 2.17
NSD1-215	ENST00000602285	CYP19A1	P11511	503 aa	Predicted RBP	28.6	■■■□□ 2.17
NSD1-215	ENST00000602285	NPM2	Q86SE8	214 aa	Known RBP	28.6	■■■□□ 2.17
NSD1-215	ENST00000602285	METTL22	Q9BUU2	404 aa	Predicted RBP	28.6	■■■□□ 2.17
NSD1-215	ENST00000602285	UBTFL1	P0CB47	393 aa	Predicted RBP	28.59	■■■□□ 2.17
NSD1-215	ENST00000602285	ATP6V1A	P38606	617 aa		28.59	■■■□□ 2.17
NSD1-215	ENST00000602285	KRT27	Q7Z3Y8	459 aa		28.58	■■■□□ 2.17
NSD1-215	ENST00000602285	SLC4A9	Q96Q91	983 aa		28.58	■■■□□ 2.17
NSD1-215	ENST00000602285	C1orf115	Q9H7X2	142 aa		28.58	■■■□□ 2.17
NSD1-215	ENST00000602285	HMMR	O75330	724 aa		28.57	■■■□□ 2.16
NSD1-215	ENST00000602285	KIF6	Q6ZMV9	814 aa		28.57	■■■□□ 2.16
NSD1-215	ENST00000602285	FAM196A	Q6ZSG2	479 aa		28.57	■■■□□ 2.16
NSD1-215	ENST00000602285	ANKRD44	Q8N8A2	993 aa		28.57	■■■□□ 2.16
NSD1-215	ENST00000602285	PIP4K2A	P48426	406 aa	Predicted RBP	28.56	■■■□□ 2.16
NSD1-215	ENST00000602285	GCC1	Q96CN9	775 aa		28.56	■■■□□ 2.16
NSD1-215	ENST00000602285	ARFGEF2	Q9Y6D5	1785 aa		28.56	■■■□□ 2.16
NSD1-215	ENST00000602285	USP44	Q9H0E7	712 aa		28.55	■■■□□ 2.16
NSD1-215	ENST00000602285	BTAF1	O14981	1849 aa		28.55	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms