RNA–Protein interactions for RNA: ENST00000601769.5

CD22-231, Transcript of CD22 molecule, human

TSL 2

Gene CD22, Length 3,060 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD22-231	ENST00000601769	USP35	Q9P2H5	1018 aa		13.21	□□□□□ -0.29
CD22-231	ENST00000601769	PHLPP1	O60346	1717 aa		13.21	□□□□□ -0.29
CD22-231	ENST00000601769	ZCRB1	Q8TBF4	217 aa	Known RBP	13.21	□□□□□ -0.3
CD22-231	ENST00000601769	COL14A1	Q05707	1796 aa	Known RBP	13.21	□□□□□ -0.3
CD22-231	ENST00000601769	APBB1	O00213	710 aa		13.2	□□□□□ -0.3
CD22-231	ENST00000601769	EVA1C	P58658	441 aa		13.2	□□□□□ -0.3
CD22-231	ENST00000601769	USP44	Q9H0E7	712 aa		13.2	□□□□□ -0.3
CD22-231	ENST00000601769	DBF4	Q9UBU7	674 aa	Predicted RBP	13.2	□□□□□ -0.3
CD22-231	ENST00000601769	IL2RB	P14784	551 aa		13.2	□□□□□ -0.3
CD22-231	ENST00000601769	BTG4	Q9NY30	223 aa		13.2	□□□□□ -0.3
CD22-231	ENST00000601769	NOP58	Q9Y2X3	529 aa	Known RBP	13.2	□□□□□ -0.3
CD22-231	ENST00000601769	SMARCA5	O60264	1052 aa	Predicted RBP	13.19	□□□□□ -0.3
CD22-231	ENST00000601769	GNAI2	P04899	355 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	FGD1	P98174	961 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	PDIA6	Q15084	440 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.19	□□□□□ -0.3
CD22-231	ENST00000601769	LAMB4	A4D0S4	1761 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	UBR2	Q8IWV8	1755 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	PCDH11X	Q9BZA7	1347 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	PCDH11Y	Q9BZA8	1340 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	LRRFIP2	Q9Y608	721 aa	Known RBP	13.19	□□□□□ -0.3
CD22-231	ENST00000601769	PAPPA	Q13219	1627 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	PNMA6E	A0A0J9YXQ4	647 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	PIP4K2A	P48426	406 aa	Predicted RBP	13.19	□□□□□ -0.3
CD22-231	ENST00000601769	CABP4	P57796	275 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	CERK	Q8TCT0	537 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.19	□□□□□ -0.3
CD22-231	ENST00000601769	DNAAF4	Q8WXU2	420 aa		13.19	□□□□□ -0.3
CD22-231	ENST00000601769	BEND3	Q5T5X7	828 aa		13.18	□□□□□ -0.3
CD22-231	ENST00000601769	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.18	□□□□□ -0.3
CD22-231	ENST00000601769	DDX54	Q8TDD1	881 aa	Known RBP	13.18	□□□□□ -0.3
CD22-231	ENST00000601769	SRCIN1	Q9C0H9	1055 aa		13.18	□□□□□ -0.3
CD22-231	ENST00000601769	PLCH1	Q4KWH8	1693 aa		13.18	□□□□□ -0.3
CD22-231	ENST00000601769	HSP90AB1	P08238	724 aa	Known RBP	13.17	□□□□□ -0.3
CD22-231	ENST00000601769	GNAI3	P08754	354 aa		13.17	□□□□□ -0.3
CD22-231	ENST00000601769	MAP3K2	Q9Y2U5	619 aa		13.17	□□□□□ -0.3
CD22-231	ENST00000601769	AIMP1	Q12904	312 aa	Known RBP	13.17	□□□□□ -0.3
CD22-231	ENST00000601769	USP16	Q9Y5T5	823 aa		13.17	□□□□□ -0.3
CD22-231	ENST00000601769	WNK3	Q9BYP7	1800 aa		13.17	□□□□□ -0.3
CD22-231	ENST00000601769	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-231	ENST00000601769	MYL6B	P14649	208 aa		13.16	□□□□□ -0.3
CD22-231	ENST00000601769	UBTFL1	P0CB47	393 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-231	ENST00000601769	TTC5	Q8N0Z6	440 aa		13.16	□□□□□ -0.3
CD22-231	ENST00000601769	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
CD22-231	ENST00000601769	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-231	ENST00000601769	EXOC6B	Q9Y2D4	811 aa		13.16	□□□□□ -0.3
CD22-231	ENST00000601769	PLEKHM2	Q8IWE5	1019 aa		13.16	□□□□□ -0.3
CD22-231	ENST00000601769	ITGB4	P16144	1822 aa		13.15	□□□□□ -0.3
CD22-231	ENST00000601769	KCP	Q6ZWJ8	1503 aa		13.15	□□□□□ -0.3
CD22-231	ENST00000601769	SLC4A3	P48751	1232 aa		13.15	□□□□□ -0.3
CD22-231	ENST00000601769	ATP8B2	P98198	1209 aa		13.15	□□□□□ -0.3
CD22-231	ENST00000601769	CWF19L2	Q2TBE0	894 aa	Known RBP	13.15	□□□□□ -0.3
CD22-231	ENST00000601769	HYPK	Q9NX55	129 aa		13.15	□□□□□ -0.3
CD22-231	ENST00000601769	KSR2	Q6VAB6	950 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	ARFGEF2	Q9Y6D5	1785 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	NRAP	Q86VF7	1730 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	HMMR	O75330	724 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	GSPT1	P15170	499 aa	Known RBP	13.14	□□□□□ -0.31
CD22-231	ENST00000601769	NKX1-1	Q15270	411 aa	Predicted RBP	13.14	□□□□□ -0.31
CD22-231	ENST00000601769	BMP2KL	Q5H9B9	411 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	FMNL2	Q96PY5	1086 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	AFDN	P55196	1824 aa	Known RBP	13.14	□□□□□ -0.31
CD22-231	ENST00000601769	SNRPA1	P09661	255 aa	Known RBP	13.14	□□□□□ -0.31
CD22-231	ENST00000601769	LRP10	Q7Z4F1	713 aa		13.14	□□□□□ -0.31
CD22-231	ENST00000601769	DISP2	A7MBM2	1401 aa		13.13	□□□□□ -0.31
CD22-231	ENST00000601769	MFAP1	P55081	439 aa	Known RBP	13.13	□□□□□ -0.31
CD22-231	ENST00000601769	PIP4K2B	P78356	416 aa		13.13	□□□□□ -0.31
CD22-231	ENST00000601769	XAGE3	Q8WTP9	111 aa		13.13	□□□□□ -0.31
CD22-231	ENST00000601769	FBXO3	Q9UK99	471 aa		13.13	□□□□□ -0.31
CD22-231	ENST00000601769	KAT6B	Q8WYB5	2073 aa		13.13	□□□□□ -0.31
CD22-231	ENST00000601769	TUBGCP6	Q96RT7	1819 aa		13.13	□□□□□ -0.31
CD22-231	ENST00000601769	ADAMTS2	O95450	1211 aa		13.12	□□□□□ -0.31
CD22-231	ENST00000601769	ERVV-2	B6SEH9	535 aa		13.12	□□□□□ -0.31
CD22-231	ENST00000601769	BRD2	P25440	801 aa	Known RBP	13.11	□□□□□ -0.31
CD22-231	ENST00000601769	COPS6	Q7L5N1	327 aa		13.11	□□□□□ -0.31
CD22-231	ENST00000601769	PPP1R42	Q7Z4L9	355 aa		13.11	□□□□□ -0.31
CD22-231	ENST00000601769	FBXO41	Q8TF61	875 aa		13.11	□□□□□ -0.31
CD22-231	ENST00000601769	TBC1D32	Q96NH3	1257 aa		13.11	□□□□□ -0.31
CD22-231	ENST00000601769	DDRGK1	Q96HY6	314 aa		13.11	□□□□□ -0.31
CD22-231	ENST00000601769	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.11	□□□□□ -0.31
CD22-231	ENST00000601769	PTCD1	O75127	700 aa	Known RBP	13.11	□□□□□ -0.31
CD22-231	ENST00000601769	IGKV5-2	P06315	115 aa		13.1	□□□□□ -0.31
CD22-231	ENST00000601769	TTC22	Q5TAA0	569 aa		13.1	□□□□□ -0.31
CD22-231	ENST00000601769	SSH3	Q8TE77	659 aa		13.1	□□□□□ -0.31
CD22-231	ENST00000601769	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.1	□□□□□ -0.31
CD22-231	ENST00000601769	TNS2	Q63HR2	1409 aa		13.1	□□□□□ -0.31
CD22-231	ENST00000601769	RIC3	Q7Z5B4	369 aa		13.1	□□□□□ -0.31
CD22-231	ENST00000601769	NUP188	Q5SRE5	1749 aa		13.1	□□□□□ -0.31
CD22-231	ENST00000601769	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.09	□□□□□ -0.31
CD22-231	ENST00000601769	NUTM2E	B1AL46	878 aa	Predicted RBP	13.09	□□□□□ -0.31
CD22-231	ENST00000601769	NBPF26	B4DH59	902 aa		13.09	□□□□□ -0.31
CD22-231	ENST00000601769	ALDH1L1	O75891	902 aa		13.09	□□□□□ -0.31
CD22-231	ENST00000601769	NBPF14	Q5TI25	921 aa		13.09	□□□□□ -0.31
CD22-231	ENST00000601769	TSHZ3	Q63HK5	1081 aa		13.09	□□□□□ -0.31
CD22-231	ENST00000601769	NBPF10	Q6P3W6	841 aa	Known RBP	13.09	□□□□□ -0.31
CD22-231	ENST00000601769	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.09	□□□□□ -0.31
CD22-231	ENST00000601769	NBPF15	Q8N660	670 aa		13.09	□□□□□ -0.31
CD22-231	ENST00000601769	DDX58	O95786	925 aa	Known RBP	13.09	□□□□□ -0.31
CD22-231	ENST00000601769	POLA2	Q14181	598 aa		13.09	□□□□□ -0.31
CD22-231	ENST00000601769	TBC1D9	Q6ZT07	1266 aa		13.09	□□□□□ -0.31

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