RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 HTRA3P83110 453 aa11.29□□□□□ -0.6
CCDC9-206ENST00000601154 RASSF7Q02833 373 aa11.29□□□□□ -0.6
CCDC9-206ENST00000601154 NFIXQ14938 502 aa11.29□□□□□ -0.6
CCDC9-206ENST00000601154 MRC1P22897 1456 aa11.29□□□□□ -0.6
CCDC9-206ENST00000601154 DIAPH1O60610 1272 aaKnown RBP11.28□□□□□ -0.6
CCDC9-206ENST00000601154 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
CCDC9-206ENST00000601154 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
CCDC9-206ENST00000601154 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
CCDC9-206ENST00000601154 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
CCDC9-206ENST00000601154 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.6
CCDC9-206ENST00000601154 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.6
CCDC9-206ENST00000601154 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
CCDC9-206ENST00000601154 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
CCDC9-206ENST00000601154 RRAGCQ9HB90 399 aa11.27□□□□□ -0.61
CCDC9-206ENST00000601154 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
CCDC9-206ENST00000601154 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
CCDC9-206ENST00000601154 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
CCDC9-206ENST00000601154 U2SURPO15042 1029 aaKnown RBP11.26□□□□□ -0.61
CCDC9-206ENST00000601154 SERPINB2P05120 415 aa11.26□□□□□ -0.61
CCDC9-206ENST00000601154 TTC5Q8N0Z6 440 aa11.26□□□□□ -0.61
CCDC9-206ENST00000601154 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
CCDC9-206ENST00000601154 DNAJC5GQ8N7S2 189 aa11.25□□□□□ -0.61
CCDC9-206ENST00000601154 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
CCDC9-206ENST00000601154 PRELPP51888 382 aa11.24□□□□□ -0.61
CCDC9-206ENST00000601154 TEFQ10587 303 aa11.24□□□□□ -0.61
CCDC9-206ENST00000601154 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
CCDC9-206ENST00000601154 CCDC24Q8N4L8 307 aa11.24□□□□□ -0.61
CCDC9-206ENST00000601154 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
CCDC9-206ENST00000601154 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
CCDC9-206ENST00000601154 STARD3NLO95772 234 aa11.23□□□□□ -0.61
CCDC9-206ENST00000601154 FSTL1Q12841 308 aa11.23□□□□□ -0.61
CCDC9-206ENST00000601154 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
CCDC9-206ENST00000601154 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
CCDC9-206ENST00000601154 H0YIN7 160 aa11.22□□□□□ -0.61
CCDC9-206ENST00000601154 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
CCDC9-206ENST00000601154 LMNB1P20700 586 aa11.22□□□□□ -0.61
CCDC9-206ENST00000601154 EIF5P55010 431 aaKnown RBP11.22□□□□□ -0.61
CCDC9-206ENST00000601154 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
CCDC9-206ENST00000601154 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
CCDC9-206ENST00000601154 ZNF622Q969S3 477 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC9-206ENST00000601154 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
CCDC9-206ENST00000601154 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
CCDC9-206ENST00000601154 HEG1Q9ULI3 1381 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 A0A087WZG4 1122 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 NFKBIEO00221 500 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 ZNF790Q6PG37 636 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 SMC1BQ8NDV3 1235 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 KLRG1Q96E93 195 aa11.21□□□□□ -0.61
CCDC9-206ENST00000601154 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.62
CCDC9-206ENST00000601154 GLTPD2A6NH11 291 aa11.2□□□□□ -0.62
CCDC9-206ENST00000601154 NPHP1O15259 732 aa11.2□□□□□ -0.62
CCDC9-206ENST00000601154 PRR5LQ6MZQ0 368 aa11.2□□□□□ -0.62
CCDC9-206ENST00000601154 NRXN2Q9P2S2 1712 aa11.2□□□□□ -0.62
CCDC9-206ENST00000601154 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
CCDC9-206ENST00000601154 UBR2Q8IWV8 1755 aa11.19□□□□□ -0.62
CCDC9-206ENST00000601154 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
CCDC9-206ENST00000601154 KCNQ3O43525 872 aa11.19□□□□□ -0.62
CCDC9-206ENST00000601154 C21orf2O43822 256 aa11.19□□□□□ -0.62
CCDC9-206ENST00000601154 A1BGP04217 495 aa11.19□□□□□ -0.62
CCDC9-206ENST00000601154 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
CCDC9-206ENST00000601154 PIP4K2AP48426 406 aaPredicted RBP11.19□□□□□ -0.62
CCDC9-206ENST00000601154 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
CCDC9-206ENST00000601154 FMNL2Q96PY5 1086 aa11.19□□□□□ -0.62
CCDC9-206ENST00000601154 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
CCDC9-206ENST00000601154 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
CCDC9-206ENST00000601154 PDE6BP35913 854 aa11.18□□□□□ -0.62
CCDC9-206ENST00000601154 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
CCDC9-206ENST00000601154 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
CCDC9-206ENST00000601154 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
CCDC9-206ENST00000601154 BRIP1Q9BX63 1249 aa11.18□□□□□ -0.62
CCDC9-206ENST00000601154 TEX13AQ9BXU3 409 aaPredicted RBP11.18□□□□□ -0.62
CCDC9-206ENST00000601154 SCN7AQ01118 1682 aa11.17□□□□□ -0.62
CCDC9-206ENST00000601154 VIRMAQ69YN4 1812 aaKnown RBP11.17□□□□□ -0.62
CCDC9-206ENST00000601154 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
CCDC9-206ENST00000601154 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
CCDC9-206ENST00000601154 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
CCDC9-206ENST00000601154 SETDB2Q96T68 719 aa11.17□□□□□ -0.62
CCDC9-206ENST00000601154 DLEC1Q9Y238 1755 aa11.17□□□□□ -0.62
CCDC9-206ENST00000601154 TIAM2Q8IVF5 1701 aa11.17□□□□□ -0.62
CCDC9-206ENST00000601154 NPC1L1Q9UHC9 1359 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 ST5P78524 1137 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
CCDC9-206ENST00000601154 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 SBF1O95248 1867 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
CCDC9-206ENST00000601154 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
CCDC9-206ENST00000601154 POTECB2RU33 542 aa11.15□□□□□ -0.62
CCDC9-206ENST00000601154 CAPN15O75808 1086 aa11.15□□□□□ -0.62
CCDC9-206ENST00000601154 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
CCDC9-206ENST00000601154 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
CCDC9-206ENST00000601154 MCM10Q7L590 875 aa11.15□□□□□ -0.62
CCDC9-206ENST00000601154 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
CCDC9-206ENST00000601154 USP16Q9Y5T5 823 aa11.15□□□□□ -0.62
CCDC9-206ENST00000601154 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.63
CCDC9-206ENST00000601154 FAM177BA6PVY3 158 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms