RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 BCS1LQ9Y276 419 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 FCHSD2O94868 740 aa12.25□□□□□ -0.45
FARP1-232ENST00000601009 USPL1Q5W0Q7 1092 aa12.25□□□□□ -0.45
FARP1-232ENST00000601009 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
FARP1-232ENST00000601009 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
FARP1-232ENST00000601009 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
FARP1-232ENST00000601009 KIAA1551Q9HCM1 1747 aa12.25□□□□□ -0.45
FARP1-232ENST00000601009 A0A0G2JLW4 131 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
FARP1-232ENST00000601009 ADCY9O60503 1353 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 DPEP1P16444 411 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 IL17REQ8NFR9 667 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 PIM2Q9P1W9 311 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 ZBTB1Q9Y2K1 713 aa12.24□□□□□ -0.45
FARP1-232ENST00000601009 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
FARP1-232ENST00000601009 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
FARP1-232ENST00000601009 BTBD11A6QL63 1104 aa12.23□□□□□ -0.45
FARP1-232ENST00000601009 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
FARP1-232ENST00000601009 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
FARP1-232ENST00000601009 DDR1Q08345 913 aa12.23□□□□□ -0.45
FARP1-232ENST00000601009 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
FARP1-232ENST00000601009 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
FARP1-232ENST00000601009 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
FARP1-232ENST00000601009 TM4SF1P30408 202 aa12.22□□□□□ -0.45
FARP1-232ENST00000601009 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
FARP1-232ENST00000601009 ZNF496Q96IT1 587 aaPredicted RBP12.22□□□□□ -0.45
FARP1-232ENST00000601009 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.45
FARP1-232ENST00000601009 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.45
FARP1-232ENST00000601009 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.45
FARP1-232ENST00000601009 PNNQ9H307 717 aaKnown RBP12.21□□□□□ -0.45
FARP1-232ENST00000601009 NFIXQ14938 502 aa12.2□□□□□ -0.46
FARP1-232ENST00000601009 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
FARP1-232ENST00000601009 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
FARP1-232ENST00000601009 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
FARP1-232ENST00000601009 SERPINB2P05120 415 aa12.19□□□□□ -0.46
FARP1-232ENST00000601009 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
FARP1-232ENST00000601009 NRXN2Q9P2S2 1712 aa12.19□□□□□ -0.46
FARP1-232ENST00000601009 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
FARP1-232ENST00000601009 NPHP1O15259 732 aa12.18□□□□□ -0.46
FARP1-232ENST00000601009 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
FARP1-232ENST00000601009 KCNA3P22001 575 aa12.18□□□□□ -0.46
FARP1-232ENST00000601009 CEP350Q5VT06 3117 aa12.18□□□□□ -0.46
FARP1-232ENST00000601009 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
FARP1-232ENST00000601009 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
FARP1-232ENST00000601009 CHRNA5P30532 468 aa12.17□□□□□ -0.46
FARP1-232ENST00000601009 MCM10Q7L590 875 aa12.17□□□□□ -0.46
FARP1-232ENST00000601009 PNISRQ8TF01 805 aaKnown RBP12.17□□□□□ -0.46
FARP1-232ENST00000601009 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
FARP1-232ENST00000601009 ZNF652Q9Y2D9 606 aa12.17□□□□□ -0.46
FARP1-232ENST00000601009 H0YIN7 160 aa12.16□□□□□ -0.46
FARP1-232ENST00000601009 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
FARP1-232ENST00000601009 BICDL1Q6ZP65 573 aa12.16□□□□□ -0.46
FARP1-232ENST00000601009 TTLL6Q8N841 843 aa12.16□□□□□ -0.46
FARP1-232ENST00000601009 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
FARP1-232ENST00000601009 DLEC1Q9Y238 1755 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 A1BGP04217 495 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 PDE6BP35913 854 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 RALBP1Q15311 655 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
FARP1-232ENST00000601009 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
FARP1-232ENST00000601009 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
FARP1-232ENST00000601009 RGL2O15211 777 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 KCNQ3O43525 872 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 ST5P78524 1137 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 TBC1D9BQ66K14 1250 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 BCORQ6W2J9 1755 aa12.14□□□□□ -0.47
FARP1-232ENST00000601009 CAMTA2O94983 1202 aa12.13□□□□□ -0.47
FARP1-232ENST00000601009 DCTN1Q14203 1278 aa12.13□□□□□ -0.47
FARP1-232ENST00000601009 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
FARP1-232ENST00000601009 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
FARP1-232ENST00000601009 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
FARP1-232ENST00000601009 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
FARP1-232ENST00000601009 KIF3CO14782 793 aa12.12□□□□□ -0.47
FARP1-232ENST00000601009 HSPA6P17066 643 aa12.12□□□□□ -0.47
FARP1-232ENST00000601009 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
FARP1-232ENST00000601009 LAMB4A4D0S4 1761 aa12.12□□□□□ -0.47
FARP1-232ENST00000601009 SBF1O95248 1867 aa12.11□□□□□ -0.47
FARP1-232ENST00000601009 TOMM70O94826 608 aa12.11□□□□□ -0.47
FARP1-232ENST00000601009 LMNB1P20700 586 aa12.11□□□□□ -0.47
FARP1-232ENST00000601009 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
FARP1-232ENST00000601009 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.47
FARP1-232ENST00000601009 KDM3BQ7LBC6 1761 aa12.1□□□□□ -0.47
FARP1-232ENST00000601009 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
FARP1-232ENST00000601009 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
FARP1-232ENST00000601009 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
FARP1-232ENST00000601009 PLEKHF1Q96S99 279 aa12.1□□□□□ -0.47
FARP1-232ENST00000601009 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
FARP1-232ENST00000601009 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
FARP1-232ENST00000601009 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
FARP1-232ENST00000601009 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
FARP1-232ENST00000601009 MYBBP1AQ9BQG0 1328 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms