RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PTPRCP08575 1304 aa23.3■■□□□ 1.32
ARHGEF1-218ENST00000599589 RILPL2Q969X0 211 aa23.29■■□□□ 1.32
ARHGEF1-218ENST00000599589 SRCIN1Q9C0H9 1055 aa23.29■■□□□ 1.32
ARHGEF1-218ENST00000599589 BCL2L12Q9HB09 334 aa23.29■■□□□ 1.32
ARHGEF1-218ENST00000599589 CNPY2Q9Y2B0 182 aa23.29■■□□□ 1.32
ARHGEF1-218ENST00000599589 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
ARHGEF1-218ENST00000599589 TRIM6-TRIM34B2RNG4 842 aa23.28■■□□□ 1.32
ARHGEF1-218ENST00000599589 MX1P20591 662 aa23.28■■□□□ 1.32
ARHGEF1-218ENST00000599589 CHMLP26374 656 aa23.28■■□□□ 1.32
ARHGEF1-218ENST00000599589 PLCB2Q00722 1185 aa23.28■■□□□ 1.32
ARHGEF1-218ENST00000599589 SLC4A10Q6U841 1118 aa23.28■■□□□ 1.32
ARHGEF1-218ENST00000599589 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 HAP1P54257 671 aaPredicted RBP23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 NALCNQ8IZF0 1738 aa23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 SALL3Q9BXA9 1300 aa23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 KDM4AO75164 1064 aa23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 TMEM87AQ8NBN3 555 aa23.27■■□□□ 1.32
ARHGEF1-218ENST00000599589 RIMS1Q86UR5 1692 aaKnown RBP23.26■■□□□ 1.31
ARHGEF1-218ENST00000599589 SLC4A2P04920 1241 aa23.26■■□□□ 1.31
ARHGEF1-218ENST00000599589 RPAP1Q9BWH6 1393 aaPredicted RBP23.26■■□□□ 1.31
ARHGEF1-218ENST00000599589 SULT6B1Q6IMI4 303 aa23.26■■□□□ 1.31
ARHGEF1-218ENST00000599589 CHL1O00533 1208 aa23.25■■□□□ 1.31
ARHGEF1-218ENST00000599589 HSP90AB2PQ58FF8 381 aa23.25■■□□□ 1.31
ARHGEF1-218ENST00000599589 MCM10Q7L590 875 aa23.25■■□□□ 1.31
ARHGEF1-218ENST00000599589 F6X3S4 739 aa23.25■■□□□ 1.31
ARHGEF1-218ENST00000599589 LETM1O95202 739 aaPredicted RBP23.24■■□□□ 1.31
ARHGEF1-218ENST00000599589 GTPBP4Q9BZE4 634 aaKnown RBP23.24■■□□□ 1.31
ARHGEF1-218ENST00000599589 KIAA0232Q92628 1395 aa23.24■■□□□ 1.31
ARHGEF1-218ENST00000599589 SPDYE4A6NLX3 237 aa23.23■■□□□ 1.31
ARHGEF1-218ENST00000599589 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
ARHGEF1-218ENST00000599589 PDCL2Q8N4E4 241 aa23.23■■□□□ 1.31
ARHGEF1-218ENST00000599589 LRRCC1Q9C099 1032 aa23.23■■□□□ 1.31
ARHGEF1-218ENST00000599589 SOX12O15370 315 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 AP5Z1O43299 807 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 UNC5CLQ8IV45 518 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 KCNF1Q9H3M0 494 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 PYCARDQ9ULZ3 195 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 RIOK3O14730 519 aaKnown RBP23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 UBE2HP62256 183 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 G2E3Q7L622 706 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 KIAA1524Q8TCG1 905 aa23.22■■□□□ 1.31
ARHGEF1-218ENST00000599589 IL25Q9H293 177 aa23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 MAP3K19Q56UN5 1328 aa23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 A0A0U1RQG5 324 aaPredicted RBP23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 GIMAP6Q6P9H5 292 aa23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 IL17RAQ96F46 866 aa23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 PEAK1Q9H792 1746 aa23.21■■□□□ 1.31
ARHGEF1-218ENST00000599589 ZSCAN22P10073 491 aaPredicted RBP23.2■■□□□ 1.3
ARHGEF1-218ENST00000599589 FIBPO43427 364 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 GNAI2P04899 355 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 PLEKHG5O94827 1062 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 CHAF1AQ13111 956 aaPredicted RBP23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 SPC24Q8NBT2 197 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 FUCA2Q9BTY2 467 aa23.19■■□□□ 1.3
ARHGEF1-218ENST00000599589 FLT4P35916 1363 aa23.18■■□□□ 1.3
ARHGEF1-218ENST00000599589 CCT4P50991 539 aaKnown RBP23.18■■□□□ 1.3
ARHGEF1-218ENST00000599589 LARP6Q9BRS8 491 aaKnown RBP23.18■■□□□ 1.3
ARHGEF1-218ENST00000599589 MIS18AQ9NYP9 233 aa23.18■■□□□ 1.3
ARHGEF1-218ENST00000599589 HSPA4P34932 840 aa23.17■■□□□ 1.3
ARHGEF1-218ENST00000599589 PNMA6EA0A0J9YXQ4 647 aa23.17■■□□□ 1.3
ARHGEF1-218ENST00000599589 STX6O43752 255 aa23.17■■□□□ 1.3
ARHGEF1-218ENST00000599589 U2AF2P26368 475 aaKnown RBP eCLIP23.17■■□□□ 1.35e-6■■■□□ 17.8
ARHGEF1-218ENST00000599589 NLRP6P59044 892 aa23.17■■□□□ 1.3
ARHGEF1-218ENST00000599589 FMN2Q9NZ56 1722 aa23.17■■□□□ 1.3
ARHGEF1-218ENST00000599589 SYT1P21579 422 aa23.16■■□□□ 1.3
ARHGEF1-218ENST00000599589 ANKRD7Q92527 254 aa23.16■■□□□ 1.3
ARHGEF1-218ENST00000599589 ARHGEF10O15013 1369 aa23.16■■□□□ 1.3
ARHGEF1-218ENST00000599589 ZNF142P52746 1687 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF1-218ENST00000599589 AMPHP49418 695 aa23.16■■□□□ 1.3
ARHGEF1-218ENST00000599589 KIF20AO95235 890 aa23.15■■□□□ 1.3
ARHGEF1-218ENST00000599589 RGPD1P0DJD0 1748 aa23.15■■□□□ 1.3
ARHGEF1-218ENST00000599589 F13A1P00488 732 aa23.15■■□□□ 1.3
ARHGEF1-218ENST00000599589 ADAMTSL3P82987 1691 aa23.15■■□□□ 1.3
ARHGEF1-218ENST00000599589 STAP2Q9UGK3 403 aa23.14■■□□□ 1.3
ARHGEF1-218ENST00000599589 PIK3C2AO00443 1686 aa23.14■■□□□ 1.3
ARHGEF1-218ENST00000599589 CHD2O14647 1828 aaKnown RBP23.14■■□□□ 1.29
ARHGEF1-218ENST00000599589 TPM3P06753 285 aa23.13■■□□□ 1.29
ARHGEF1-218ENST00000599589 AK2P54819 239 aa23.13■■□□□ 1.29
ARHGEF1-218ENST00000599589 CTIFO43310 598 aaKnown RBP23.12■■□□□ 1.29
ARHGEF1-218ENST00000599589 DTNBO60941 627 aa23.12■■□□□ 1.29
ARHGEF1-218ENST00000599589 MAP4K4O95819 1239 aaPredicted RBP23.12■■□□□ 1.29
ARHGEF1-218ENST00000599589 SMC3Q9UQE7 1217 aa23.12■■□□□ 1.29
ARHGEF1-218ENST00000599589 SNX14Q9Y5W7 946 aa23.12■■□□□ 1.29
ARHGEF1-218ENST00000599589 SETD1BQ9UPS6 1966 aaKnown RBP23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 IGSF3O75054 1194 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 TTC14Q96N46 770 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 GOLGA6L6A8MZA4 724 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 DNM1Q05193 864 aaKnown RBP23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 RUFY3Q7L099 469 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 ATP6V1DQ9Y5K8 247 aa23.11■■□□□ 1.29
ARHGEF1-218ENST00000599589 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.1■■□□□ 1.29
ARHGEF1-218ENST00000599589 IL1RAPL2Q9NP60 686 aa23.1■■□□□ 1.29
ARHGEF1-218ENST00000599589 CRB1P82279 1406 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms