RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SYTL4Q96C24 671 aaPredicted RBP29.68■■■□□ 2.34
SYMPK-212ENST00000598896 PROSER3Q2NL68 480 aa29.67■■■□□ 2.34
SYMPK-212ENST00000598896 ATG3Q9NT62 314 aa29.67■■■□□ 2.34
SYMPK-212ENST00000598896 DBF4Q9UBU7 674 aaPredicted RBP29.67■■■□□ 2.34
SYMPK-212ENST00000598896 USP16Q9Y5T5 823 aa29.67■■■□□ 2.34
SYMPK-212ENST00000598896 PTCD1O75127 700 aaKnown RBP29.66■■■□□ 2.34
SYMPK-212ENST00000598896 QTRT2Q9H974 415 aaKnown RBP29.65■■■□□ 2.34
SYMPK-212ENST00000598896 DDX19BQ9UMR2 479 aa29.65■■■□□ 2.34
SYMPK-212ENST00000598896 ACSBG1Q96GR2 724 aa29.65■■■□□ 2.34
SYMPK-212ENST00000598896 FKBP5Q13451 457 aaPredicted RBP29.64■■■□□ 2.34
SYMPK-212ENST00000598896 F6X3S4 739 aa29.63■■■□□ 2.33
SYMPK-212ENST00000598896 ONECUT3O60422 494 aaPredicted RBP29.63■■■□□ 2.33
SYMPK-212ENST00000598896 PDIA6Q15084 440 aa29.63■■■□□ 2.33
SYMPK-212ENST00000598896 FBXO41Q8TF61 875 aa29.62■■■□□ 2.33
SYMPK-212ENST00000598896 INTS3Q68E01 1043 aaKnown RBP29.61■■■□□ 2.33
SYMPK-212ENST00000598896 DDX21Q9NR30 783 aaKnown RBP eCLIP29.61■■■□□ 2.33
SYMPK-212ENST00000598896 AAMPQ13685 434 aa29.59■■■□□ 2.33
SYMPK-212ENST00000598896 ZBTB40Q9NUA8 1239 aa29.59■■■□□ 2.33
SYMPK-212ENST00000598896 ZBTB7BO15156 539 aaPredicted RBP29.58■■■□□ 2.33
SYMPK-212ENST00000598896 N4BP2Q86UW6 1770 aaPredicted RBP29.58■■■□□ 2.33
SYMPK-212ENST00000598896 KCNQ2O43526 872 aa29.57■■■□□ 2.32
SYMPK-212ENST00000598896 SEPT12Q8IYM1 358 aa29.57■■■□□ 2.32
SYMPK-212ENST00000598896 HYPKQ9NX55 129 aa29.57■■■□□ 2.32
SYMPK-212ENST00000598896 PIP4K2AP48426 406 aaPredicted RBP29.57■■■□□ 2.32
SYMPK-212ENST00000598896 SLC4A10Q6U841 1118 aa29.57■■■□□ 2.32
SYMPK-212ENST00000598896 PCDHB15Q9Y5E8 787 aa29.57■■■□□ 2.32
SYMPK-212ENST00000598896 FAM182BQ5T319 152 aa29.56■■■□□ 2.32
SYMPK-212ENST00000598896 LRP10Q7Z4F1 713 aa29.56■■■□□ 2.32
SYMPK-212ENST00000598896 MYL6BP14649 208 aa29.55■■■□□ 2.32
SYMPK-212ENST00000598896 SLC4A9Q96Q91 983 aa29.55■■■□□ 2.32
SYMPK-212ENST00000598896 PXDNLA1KZ92 1463 aa29.55■■■□□ 2.32
SYMPK-212ENST00000598896 VSIG10Q8N0Z9 540 aa29.55■■■□□ 2.32
SYMPK-212ENST00000598896 RBM42Q9BTD8 480 aaKnown RBP29.55■■■□□ 2.32
SYMPK-212ENST00000598896 ADCY9O60503 1353 aa29.54■■■□□ 2.32
SYMPK-212ENST00000598896 KDM2BQ8NHM5 1336 aa29.53■■■□□ 2.32
SYMPK-212ENST00000598896 PI4KAP2A4QPH2 592 aa29.52■■■□□ 2.32
SYMPK-212ENST00000598896 PI4KAP1Q8N8J0 262 aa29.52■■■□□ 2.32
SYMPK-212ENST00000598896 TJP1Q07157 1748 aa29.52■■■□□ 2.32
SYMPK-212ENST00000598896 NBPF26B4DH59 902 aa29.51■■■□□ 2.31
SYMPK-212ENST00000598896 CCT4P50991 539 aaKnown RBP29.51■■■□□ 2.31
SYMPK-212ENST00000598896 NBPF14Q5TI25 921 aa29.51■■■□□ 2.31
SYMPK-212ENST00000598896 ZNF772Q68DY9 489 aaPredicted RBP29.51■■■□□ 2.31
SYMPK-212ENST00000598896 NBPF10Q6P3W6 841 aaKnown RBP29.51■■■□□ 2.31
SYMPK-212ENST00000598896 DNAJC10Q8IXB1 793 aa29.51■■■□□ 2.31
SYMPK-212ENST00000598896 NBPF15Q8N660 670 aa29.51■■■□□ 2.31
SYMPK-212ENST00000598896 ERBB4Q15303 1308 aa29.5■■■□□ 2.31
SYMPK-212ENST00000598896 NHSQ6T4R5 1651 aa29.5■■■□□ 2.31
SYMPK-212ENST00000598896 A1BGP04217 495 aa29.5■■■□□ 2.31
SYMPK-212ENST00000598896 PTF1AQ7RTS3 328 aa29.5■■■□□ 2.31
SYMPK-212ENST00000598896 BRWD3Q6RI45 1802 aa29.5■■■□□ 2.31
SYMPK-212ENST00000598896 IGHDP01880 384 aa29.49■■■□□ 2.31
SYMPK-212ENST00000598896 AIMP1Q12904 312 aaKnown RBP29.49■■■□□ 2.31
SYMPK-212ENST00000598896 XAGE3Q8WTP9 111 aa29.48■■■□□ 2.31
SYMPK-212ENST00000598896 DNAAF4Q8WXU2 420 aa29.48■■■□□ 2.31
SYMPK-212ENST00000598896 SBF2Q86WG5 1849 aa29.48■■■□□ 2.31
SYMPK-212ENST00000598896 COPS6Q7L5N1 327 aa29.47■■■□□ 2.31
SYMPK-212ENST00000598896 CHMP4BQ9H444 224 aaKnown RBP29.47■■■□□ 2.31
SYMPK-212ENST00000598896 C1orf115Q9H7X2 142 aa29.47■■■□□ 2.31
SYMPK-212ENST00000598896 PALLDQ8WX93 1383 aa29.47■■■□□ 2.31
SYMPK-212ENST00000598896 KSR2Q6VAB6 950 aa29.46■■■□□ 2.31
SYMPK-212ENST00000598896 MEIS3Q99687 375 aa29.46■■■□□ 2.31
SYMPK-212ENST00000598896 TEX13AQ9BXU3 409 aaPredicted RBP29.46■■■□□ 2.31
SYMPK-212ENST00000598896 MAP3K2Q9Y2U5 619 aa29.46■■■□□ 2.31
SYMPK-212ENST00000598896 BTAF1O14981 1849 aa29.46■■■□□ 2.31
SYMPK-212ENST00000598896 CENPQQ7L2Z9 268 aaPredicted RBP29.44■■■□□ 2.3
SYMPK-212ENST00000598896 CICQ96RK0 1608 aaPredicted RBP29.44■■■□□ 2.3
SYMPK-212ENST00000598896 RBM6P78332 1123 aaKnown RBP29.44■■■□□ 2.3
SYMPK-212ENST00000598896 BEND3Q5T5X7 828 aa29.44■■■□□ 2.3
SYMPK-212ENST00000598896 EP400Q96L91 3159 aa29.44■■■□□ 2.3
SYMPK-212ENST00000598896 ATP10DQ9P241 1426 aa29.44■■■□□ 2.3
SYMPK-212ENST00000598896 DDX58O95786 925 aaKnown RBP29.43■■■□□ 2.3
SYMPK-212ENST00000598896 STARD3NLO95772 234 aa29.42■■■□□ 2.3
SYMPK-212ENST00000598896 CYP19A1P11511 503 aaPredicted RBP29.42■■■□□ 2.3
SYMPK-212ENST00000598896 LOC102724428A0A0B4J2F2 783 aa29.42■■■□□ 2.3
SYMPK-212ENST00000598896 SIK1P57059 783 aa29.42■■■□□ 2.3
SYMPK-212ENST00000598896 ARFGEF2Q9Y6D5 1785 aa29.41■■■□□ 2.3
SYMPK-212ENST00000598896 SMARCC1Q92922 1105 aaPredicted RBP29.4■■■□□ 2.3
SYMPK-212ENST00000598896 SRCIN1Q9C0H9 1055 aa29.4■■■□□ 2.3
SYMPK-212ENST00000598896 ANKRD13DQ6ZTN6 518 aa29.39■■■□□ 2.3
SYMPK-212ENST00000598896 RIC3Q7Z5B4 369 aa29.39■■■□□ 2.3
SYMPK-212ENST00000598896 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
SYMPK-212ENST00000598896 ATP6V1AP38606 617 aa29.38■■■□□ 2.29
SYMPK-212ENST00000598896 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
SYMPK-212ENST00000598896 ZNF831Q5JPB2 1677 aa29.38■■■□□ 2.29
SYMPK-212ENST00000598896 NUP188Q5SRE5 1749 aa29.38■■■□□ 2.29
SYMPK-212ENST00000598896 USP44Q9H0E7 712 aa29.38■■■□□ 2.29
SYMPK-212ENST00000598896 HDAC1Q13547 482 aaPredicted RBP29.37■■■□□ 2.29
SYMPK-212ENST00000598896 ITPK1Q13572 414 aa29.37■■■□□ 2.29
SYMPK-212ENST00000598896 TTLL7Q6ZT98 887 aa29.37■■■□□ 2.29
SYMPK-212ENST00000598896 RWDD1Q9H446 243 aaPredicted RBP29.36■■■□□ 2.29
SYMPK-212ENST00000598896 COL5A3P25940 1745 aaPredicted RBP29.36■■■□□ 2.29
SYMPK-212ENST00000598896 CWF19L2Q2TBE0 894 aaKnown RBP29.36■■■□□ 2.29
SYMPK-212ENST00000598896 SIRT2Q8IXJ6 389 aa29.36■■■□□ 2.29
SYMPK-212ENST00000598896 ZBTB1Q9Y2K1 713 aa29.36■■■□□ 2.29
SYMPK-212ENST00000598896 PLBD2Q8NHP8 589 aa29.34■■■□□ 2.29
SYMPK-212ENST00000598896 RREB1Q92766 1687 aa29.34■■■□□ 2.29
SYMPK-212ENST00000598896 SKAP1Q86WV1 359 aa29.34■■■□□ 2.29
SYMPK-212ENST00000598896 LINS1Q8NG48 757 aa29.34■■■□□ 2.29
SYMPK-212ENST00000598896 METTL22Q9BUU2 404 aaPredicted RBP29.34■■■□□ 2.29
SYMPK-212ENST00000598896 IGKV5-2P06315 115 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms