RNA–Protein interactions for RNA: ENST00000597389.5

SPTBN4-211, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5

Gene SPTBN4, Length 5,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-211ENST00000597389 NLRP5P59047 1200 aa23.24■■□□□ 1.31
SPTBN4-211ENST00000597389 ANAPC15P60006 121 aa23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 SLFN5Q08AF3 891 aa23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 DNAAF4Q8WXU2 420 aa23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 TMEM266Q2M3C6 531 aa23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 C8orf76Q96K31 380 aa23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 SSRP1Q08945 709 aaKnown RBP23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 FKBP15Q5T1M5 1219 aa23.23■■□□□ 1.31
SPTBN4-211ENST00000597389 IFIT3O14879 490 aaKnown RBP23.22■■□□□ 1.31
SPTBN4-211ENST00000597389 CACNA2D4Q7Z3S7 1137 aa23.22■■□□□ 1.31
SPTBN4-211ENST00000597389 GOLGA8AA7E2F4 631 aa23.22■■□□□ 1.31
SPTBN4-211ENST00000597389 GOLGA8BA8MQT2 603 aa23.22■■□□□ 1.31
SPTBN4-211ENST00000597389 CETN2P41208 172 aa23.22■■□□□ 1.31
SPTBN4-211ENST00000597389 EHMT1Q9H9B1 1298 aa23.22■■□□□ 1.31
SPTBN4-211ENST00000597389 SPA17Q15506 151 aa23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 VAT1LQ9HCJ6 419 aa23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 EIF3JO75822 258 aaKnown RBP23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 HYPKQ9NX55 129 aa23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 CCDC194A0A1B0GVG4 234 aa23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 SUPT6HQ7KZ85 1726 aaKnown RBP23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
SPTBN4-211ENST00000597389 CCDC144CPQ8IYA2 1237 aa23.2■■□□□ 1.31
SPTBN4-211ENST00000597389 CCDC148Q8NFR7 591 aa23.2■■□□□ 1.3
SPTBN4-211ENST00000597389 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
SPTBN4-211ENST00000597389 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
SPTBN4-211ENST00000597389 CCDC150Q8NCX0 1101 aa23.2■■□□□ 1.3
SPTBN4-211ENST00000597389 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
SPTBN4-211ENST00000597389 RAB34Q9BZG1 259 aa23.2■■□□□ 1.3
SPTBN4-211ENST00000597389 ARHGEF11O15085 1522 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 CCDC102AQ96A19 550 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 MAP3K2Q9Y2U5 619 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 GOLGA6L7A0A1B0GV03 622 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 SYCE3A1L190 88 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 CCT2P78371 535 aaKnown RBP23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 CATIPQ7Z7H3 387 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 DNA2P51530 1060 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 RFC4P35249 363 aa23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 RNF41Q9H4P4 317 aaPredicted RBP23.19■■□□□ 1.3
SPTBN4-211ENST00000597389 UQCRHLA0A096LP55 91 aa23.18■■□□□ 1.3
SPTBN4-211ENST00000597389 UQCRHP07919 91 aa23.18■■□□□ 1.3
SPTBN4-211ENST00000597389 SSH1Q8WYL5 1049 aa23.18■■□□□ 1.3
SPTBN4-211ENST00000597389 NAIPQ13075 1403 aa23.18■■□□□ 1.3
SPTBN4-211ENST00000597389 LARP6Q9BRS8 491 aaKnown RBP23.18■■□□□ 1.3
SPTBN4-211ENST00000597389 CCDC66A2RUB6 948 aa23.18■■□□□ 1.3
SPTBN4-211ENST00000597389 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
SPTBN4-211ENST00000597389 CTNNBL1Q8WYA6 563 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-211ENST00000597389 DBF4Q9UBU7 674 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-211ENST00000597389 SNRKQ9NRH2 765 aa23.17■■□□□ 1.3
SPTBN4-211ENST00000597389 GOLIM4O00461 696 aa23.17■■□□□ 1.3
SPTBN4-211ENST00000597389 MACROD2A1Z1Q3 448 aa23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 CCDC113Q9H0I3 377 aa23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 WASLO00401 505 aaPredicted RBP23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 TNNT1P13805 278 aa23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 CCDC178Q5BJE1 867 aa23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 JARID2Q92833 1246 aaPredicted RBP23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 BAG4O95429 457 aaKnown RBP23.16■■□□□ 1.3
SPTBN4-211ENST00000597389 CDC5LQ99459 802 aaKnown RBP23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 LRPPRCP42704 1394 aaKnown RBP23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 CHRNA2Q15822 529 aa23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 HMGB1P09429 215 aaKnown RBP23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 LDHAL6AQ6ZMR3 332 aa23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 CABP5Q9NP86 173 aa23.15■■□□□ 1.3
SPTBN4-211ENST00000597389 SPTY2D1Q68D10 685 aaPredicted RBP23.14■■□□□ 1.3
SPTBN4-211ENST00000597389 SAMM50Q9Y512 469 aa23.14■■□□□ 1.3
SPTBN4-211ENST00000597389 GRM1Q13255 1194 aa23.14■■□□□ 1.3
SPTBN4-211ENST00000597389 ALDH1L2Q3SY69 923 aa23.14■■□□□ 1.29
SPTBN4-211ENST00000597389 CWC25Q9NXE8 425 aaPredicted RBP23.14■■□□□ 1.29
SPTBN4-211ENST00000597389 ST5P78524 1137 aa23.14■■□□□ 1.29
SPTBN4-211ENST00000597389 VPS36Q86VN1 386 aa23.14■■□□□ 1.29
SPTBN4-211ENST00000597389 TSPY2A6NKD2 308 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 RAB11FIP4Q86YS3 637 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 DRC1Q96MC2 740 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 PPP1R42Q7Z4L9 355 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 IFNL2Q8IZJ0 200 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 KAT14Q9H8E8 782 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 GOPCQ9HD26 462 aa23.13■■□□□ 1.29
SPTBN4-211ENST00000597389 HAND2P61296 217 aa23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 TDRD12Q587J7 1177 aaKnown RBP23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 FERMT2Q96AC1 680 aa23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 HLA-DOAP06340 250 aa23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 CPLX3Q8WVH0 158 aa23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 ANO10Q9NW15 660 aa23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 CIZ1Q9ULV3 898 aaPredicted RBP23.12■■□□□ 1.29
SPTBN4-211ENST00000597389 PDIA4P13667 645 aaKnown RBP23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 CNNM3Q8NE01 707 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 TMEM67Q5HYA8 995 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 BAG3O95817 575 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 NUP88Q99567 741 aaPredicted RBP23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 TMX1Q9H3N1 280 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 FGFR1OPO95684 399 aaKnown RBP23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 MCM4P33991 863 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 CA8P35219 290 aa23.11■■□□□ 1.29
SPTBN4-211ENST00000597389 USP8P40818 1118 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms