RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.67■□□□□ 0.58
ZNF541-205ENST00000595558 MAP4K4O95819 1239 aaPredicted RBP18.67■□□□□ 0.58
ZNF541-205ENST00000595558 USP44Q9H0E7 712 aa18.67■□□□□ 0.58
ZNF541-205ENST00000595558 FMN2Q9NZ56 1722 aa18.66■□□□□ 0.58
ZNF541-205ENST00000595558 MX1P20591 662 aa18.66■□□□□ 0.58
ZNF541-205ENST00000595558 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
ZNF541-205ENST00000595558 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
ZNF541-205ENST00000595558 RNF214Q8ND24 703 aa18.66■□□□□ 0.58
ZNF541-205ENST00000595558 NBPF7P0C2Y1 421 aaPredicted RBP18.65■□□□□ 0.58
ZNF541-205ENST00000595558 CHMLP26374 656 aa18.65■□□□□ 0.58
ZNF541-205ENST00000595558 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
ZNF541-205ENST00000595558 PROSER3Q2NL68 480 aa18.65■□□□□ 0.58
ZNF541-205ENST00000595558 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
ZNF541-205ENST00000595558 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.58
ZNF541-205ENST00000595558 PROSER2Q86WR7 435 aaPredicted RBP18.64■□□□□ 0.57
ZNF541-205ENST00000595558 PDLIM2Q96JY6 352 aa18.64■□□□□ 0.57
ZNF541-205ENST00000595558 BRD1O95696 1058 aa18.63■□□□□ 0.57
ZNF541-205ENST00000595558 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
ZNF541-205ENST00000595558 PI4KAP2A4QPH2 592 aa18.63■□□□□ 0.57
ZNF541-205ENST00000595558 LRSAM1Q6UWE0 723 aa18.63■□□□□ 0.57
ZNF541-205ENST00000595558 PI4KAP1Q8N8J0 262 aa18.63■□□□□ 0.57
ZNF541-205ENST00000595558 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
ZNF541-205ENST00000595558 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
ZNF541-205ENST00000595558 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
ZNF541-205ENST00000595558 BTBD11A6QL63 1104 aa18.62■□□□□ 0.57
ZNF541-205ENST00000595558 RRP9O43818 475 aaKnown RBP18.62■□□□□ 0.57
ZNF541-205ENST00000595558 OFD1O75665 1012 aa18.62■□□□□ 0.57
ZNF541-205ENST00000595558 EIF4A1P60842 406 aaKnown RBP18.62■□□□□ 0.57
ZNF541-205ENST00000595558 ANKRD24Q8TF21 1146 aa18.61■□□□□ 0.57
ZNF541-205ENST00000595558 DTNBO60941 627 aa18.61■□□□□ 0.57
ZNF541-205ENST00000595558 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
ZNF541-205ENST00000595558 CUL4AQ13619 759 aa18.61■□□□□ 0.57
ZNF541-205ENST00000595558 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
ZNF541-205ENST00000595558 GADD45BO75293 160 aaPredicted RBP18.6■□□□□ 0.57
ZNF541-205ENST00000595558 TEFQ10587 303 aa18.6■□□□□ 0.57
ZNF541-205ENST00000595558 LARP6Q9BRS8 491 aaKnown RBP18.6■□□□□ 0.57
ZNF541-205ENST00000595558 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
ZNF541-205ENST00000595558 KRT28Q7Z3Y7 464 aa18.6■□□□□ 0.57
ZNF541-205ENST00000595558 NOL7Q9UMY1 257 aaKnown RBP18.6■□□□□ 0.57
ZNF541-205ENST00000595558 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
ZNF541-205ENST00000595558 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
ZNF541-205ENST00000595558 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
ZNF541-205ENST00000595558 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.57
ZNF541-205ENST00000595558 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.57
ZNF541-205ENST00000595558 R3HCC1Q9Y3T6 440 aaKnown RBP18.58■□□□□ 0.57
ZNF541-205ENST00000595558 PXDNQ92626 1479 aa18.58■□□□□ 0.57
ZNF541-205ENST00000595558 GNAI3P08754 354 aa18.58■□□□□ 0.56
ZNF541-205ENST00000595558 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
ZNF541-205ENST00000595558 TPM2P07951 284 aa18.57■□□□□ 0.56
ZNF541-205ENST00000595558 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
ZNF541-205ENST00000595558 MPNDQ8N594 471 aa18.57■□□□□ 0.56
ZNF541-205ENST00000595558 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
ZNF541-205ENST00000595558 STAP2Q9UGK3 403 aa18.57■□□□□ 0.56
ZNF541-205ENST00000595558 TUBGCP6Q96RT7 1819 aa18.57■□□□□ 0.56
ZNF541-205ENST00000595558 SURF6O75683 361 aaKnown RBP18.56■□□□□ 0.56
ZNF541-205ENST00000595558 MCCP23508 829 aa18.56■□□□□ 0.56
ZNF541-205ENST00000595558 HSPA2P54652 639 aa18.56■□□□□ 0.56
ZNF541-205ENST00000595558 LTN1O94822 1766 aa18.56■□□□□ 0.56
ZNF541-205ENST00000595558 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
ZNF541-205ENST00000595558 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
ZNF541-205ENST00000595558 ADGRL3Q9HAR2 1447 aa18.55■□□□□ 0.56
ZNF541-205ENST00000595558 SOS1Q07889 1333 aaPredicted RBP18.55■□□□□ 0.56
ZNF541-205ENST00000595558 SRGAP3O43295 1099 aa18.55■□□□□ 0.56
ZNF541-205ENST00000595558 MCM2P49736 904 aa18.55■□□□□ 0.56
ZNF541-205ENST00000595558 NLRP2Q9NX02 1062 aa18.55■□□□□ 0.56
ZNF541-205ENST00000595558 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
ZNF541-205ENST00000595558 CHD2O14647 1828 aaKnown RBP18.54■□□□□ 0.56
ZNF541-205ENST00000595558 HS1BP3Q53T59 392 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
ZNF541-205ENST00000595558 ANAPC15P60006 121 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 VSIG10Q8N0Z9 540 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 KCNH5Q8NCM2 988 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 SRCIN1Q9C0H9 1055 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 PA2G4Q9UQ80 394 aaKnown RBP18.54■□□□□ 0.56
ZNF541-205ENST00000595558 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
ZNF541-205ENST00000595558 NFAT5O94916 1531 aa18.54■□□□□ 0.56
ZNF541-205ENST00000595558 MBD3O95983 291 aa18.53■□□□□ 0.56
ZNF541-205ENST00000595558 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-205ENST00000595558 INTS4Q96HW7 963 aaKnown RBP18.53■□□□□ 0.56
ZNF541-205ENST00000595558 ZKSCAN5Q9Y2L8 839 aa18.53■□□□□ 0.56
ZNF541-205ENST00000595558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-205ENST00000595558 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
ZNF541-205ENST00000595558 ZNF500O60304 480 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-205ENST00000595558 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
ZNF541-205ENST00000595558 CPA1P15085 419 aa18.53■□□□□ 0.56
ZNF541-205ENST00000595558 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-205ENST00000595558 HSPA4P34932 840 aa18.52■□□□□ 0.56
ZNF541-205ENST00000595558 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
ZNF541-205ENST00000595558 BEND3Q5T5X7 828 aa18.52■□□□□ 0.56
ZNF541-205ENST00000595558 RASEFQ8IZ41 740 aa18.52■□□□□ 0.56
ZNF541-205ENST00000595558 MYL6BP14649 208 aa18.52■□□□□ 0.55
ZNF541-205ENST00000595558 PI4K2BQ8TCG2 481 aa18.52■□□□□ 0.55
ZNF541-205ENST00000595558 DNAAF4Q8WXU2 420 aa18.52■□□□□ 0.55
ZNF541-205ENST00000595558 MAP3K2Q9Y2U5 619 aa18.52■□□□□ 0.55
ZNF541-205ENST00000595558 SSH3Q8TE77 659 aa18.51■□□□□ 0.55
ZNF541-205ENST00000595558 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
ZNF541-205ENST00000595558 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
ZNF541-205ENST00000595558 NFATC2IPQ8NCF5 419 aa18.5■□□□□ 0.55
ZNF541-205ENST00000595558 ADCY9O60503 1353 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms