RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
SCAF1-202ENST00000595242 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
SCAF1-202ENST00000595242 DPY19L2Q6NUT2 758 aa17.56■□□□□ 0.4
SCAF1-202ENST00000595242 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
SCAF1-202ENST00000595242 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
SCAF1-202ENST00000595242 FER1L6Q2WGJ9 1857 aa17.55■□□□□ 0.4
SCAF1-202ENST00000595242 CTCFP49711 727 aaPredicted RBP17.55■□□□□ 0.4
SCAF1-202ENST00000595242 CHADLQ6NUI6 762 aa17.55■□□□□ 0.4
SCAF1-202ENST00000595242 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
SCAF1-202ENST00000595242 AIDAQ96BJ3 306 aa17.54■□□□□ 0.4
SCAF1-202ENST00000595242 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
SCAF1-202ENST00000595242 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
SCAF1-202ENST00000595242 NFKBIEO00221 500 aa17.52■□□□□ 0.4
SCAF1-202ENST00000595242 ZPR1O75312 459 aa17.52■□□□□ 0.4
SCAF1-202ENST00000595242 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
SCAF1-202ENST00000595242 CABP4P57796 275 aa17.52■□□□□ 0.4
SCAF1-202ENST00000595242 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
SCAF1-202ENST00000595242 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
SCAF1-202ENST00000595242 LBX1P52954 281 aa17.51■□□□□ 0.39
SCAF1-202ENST00000595242 CACNA1SQ13698 1873 aa17.51■□□□□ 0.39
SCAF1-202ENST00000595242 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
SCAF1-202ENST00000595242 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
SCAF1-202ENST00000595242 SCN4AP35499 1836 aa17.5■□□□□ 0.39
SCAF1-202ENST00000595242 EIF4G2P78344 907 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCAF1-202ENST00000595242 VEGFBP49765 207 aa17.49■□□□□ 0.39
SCAF1-202ENST00000595242 ERFEQ4G0M1 354 aa17.49■□□□□ 0.39
SCAF1-202ENST00000595242 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
SCAF1-202ENST00000595242 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
SCAF1-202ENST00000595242 ANKRD31Q8N7Z5 1873 aa17.48■□□□□ 0.39
SCAF1-202ENST00000595242 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
SCAF1-202ENST00000595242 NFIXQ14938 502 aa17.48■□□□□ 0.39
SCAF1-202ENST00000595242 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
SCAF1-202ENST00000595242 WBP1LQ9NX94 342 aa17.48■□□□□ 0.39
SCAF1-202ENST00000595242 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
SCAF1-202ENST00000595242 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
SCAF1-202ENST00000595242 H0YIN7 160 aa17.47■□□□□ 0.39
SCAF1-202ENST00000595242 NFATC2IPQ8NCF5 419 aa17.47■□□□□ 0.39
SCAF1-202ENST00000595242 SERPINB2P05120 415 aa17.46■□□□□ 0.39
SCAF1-202ENST00000595242 MLLT1Q03111 559 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-202ENST00000595242 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
SCAF1-202ENST00000595242 PLEKHO1Q53GL0 409 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-202ENST00000595242 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
SCAF1-202ENST00000595242 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-202ENST00000595242 MTHFSP49914 203 aa17.45■□□□□ 0.38
SCAF1-202ENST00000595242 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-202ENST00000595242 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
SCAF1-202ENST00000595242 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
SCAF1-202ENST00000595242 SOS1Q07889 1333 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-202ENST00000595242 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-202ENST00000595242 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
SCAF1-202ENST00000595242 SLX4Q8IY92 1834 aa17.43■□□□□ 0.38
SCAF1-202ENST00000595242 C21orf2O43822 256 aa17.43■□□□□ 0.38
SCAF1-202ENST00000595242 HSPA8P11142 646 aaKnown RBP17.43■□□□□ 0.38
SCAF1-202ENST00000595242 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-202ENST00000595242 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
SCAF1-202ENST00000595242 AMOTQ4VCS5 1084 aa17.42■□□□□ 0.38
SCAF1-202ENST00000595242 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
SCAF1-202ENST00000595242 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
SCAF1-202ENST00000595242 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAF1-202ENST00000595242 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
SCAF1-202ENST00000595242 ITGBL1O95965 494 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-202ENST00000595242 RGS19P49795 217 aa17.41■□□□□ 0.38
SCAF1-202ENST00000595242 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
SCAF1-202ENST00000595242 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
SCAF1-202ENST00000595242 COL15A1P39059 1388 aa17.4■□□□□ 0.38
SCAF1-202ENST00000595242 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
SCAF1-202ENST00000595242 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
SCAF1-202ENST00000595242 TAOK3Q9H2K8 898 aa17.4■□□□□ 0.38
SCAF1-202ENST00000595242 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
SCAF1-202ENST00000595242 TNRC18O15417 2968 aaPredicted RBP17.4■□□□□ 0.38
SCAF1-202ENST00000595242 TAF1DQ9H5J8 278 aaPredicted RBP17.39■□□□□ 0.37
SCAF1-202ENST00000595242 LTBP3Q9NS15 1303 aa17.39■□□□□ 0.37
SCAF1-202ENST00000595242 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
SCAF1-202ENST00000595242 CYP19A1P11511 503 aaPredicted RBP17.38■□□□□ 0.37
SCAF1-202ENST00000595242 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
SCAF1-202ENST00000595242 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
SCAF1-202ENST00000595242 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
SCAF1-202ENST00000595242 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
SCAF1-202ENST00000595242 ADAMTSL1Q8N6G6 1762 aa17.38■□□□□ 0.37
SCAF1-202ENST00000595242 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
SCAF1-202ENST00000595242 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
SCAF1-202ENST00000595242 PDE6BP35913 854 aa17.37■□□□□ 0.37
SCAF1-202ENST00000595242 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
SCAF1-202ENST00000595242 EAPPQ56P03 285 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-202ENST00000595242 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-202ENST00000595242 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
SCAF1-202ENST00000595242 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
SCAF1-202ENST00000595242 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
SCAF1-202ENST00000595242 ZBTB1Q9Y2K1 713 aa17.36■□□□□ 0.37
SCAF1-202ENST00000595242 CASP8AP2Q9UKL3 1982 aa17.36■□□□□ 0.37
SCAF1-202ENST00000595242 TRPM7Q96QT4 1865 aa17.33■□□□□ 0.37
SCAF1-202ENST00000595242 AEBP1Q8IUX7 1158 aa17.33■□□□□ 0.36
SCAF1-202ENST00000595242 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
SCAF1-202ENST00000595242 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
SCAF1-202ENST00000595242 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
SCAF1-202ENST00000595242 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
SCAF1-202ENST00000595242 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
SCAF1-202ENST00000595242 CNTROBQ8N137 903 aa17.32■□□□□ 0.36
SCAF1-202ENST00000595242 CNKSR1Q969H4 720 aa17.32■□□□□ 0.36
SCAF1-202ENST00000595242 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms