RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
NOTCH3-202ENST00000595045 CLSPNQ9HAW4 1339 aa13.37□□□□□ -0.27
NOTCH3-202ENST00000595045 TJP1Q07157 1748 aa13.36□□□□□ -0.27
NOTCH3-202ENST00000595045 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
NOTCH3-202ENST00000595045 MTHFSP49914 203 aa13.35□□□□□ -0.27
NOTCH3-202ENST00000595045 AMER1Q5JTC6 1135 aaPredicted RBP13.35□□□□□ -0.27
NOTCH3-202ENST00000595045 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
NOTCH3-202ENST00000595045 DLEC1Q9Y238 1755 aa13.35□□□□□ -0.27
NOTCH3-202ENST00000595045 POTECB2RU33 542 aa13.34□□□□□ -0.27
NOTCH3-202ENST00000595045 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
NOTCH3-202ENST00000595045 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
NOTCH3-202ENST00000595045 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
NOTCH3-202ENST00000595045 MORC1Q86VD1 984 aa13.33□□□□□ -0.28
NOTCH3-202ENST00000595045 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.28
NOTCH3-202ENST00000595045 NFKBIEO00221 500 aa13.32□□□□□ -0.28
NOTCH3-202ENST00000595045 ZPR1O75312 459 aa13.32□□□□□ -0.28
NOTCH3-202ENST00000595045 NFIXQ14938 502 aa13.32□□□□□ -0.28
NOTCH3-202ENST00000595045 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
NOTCH3-202ENST00000595045 TTLL6Q8N841 843 aa13.32□□□□□ -0.28
NOTCH3-202ENST00000595045 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
NOTCH3-202ENST00000595045 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
NOTCH3-202ENST00000595045 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
NOTCH3-202ENST00000595045 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
NOTCH3-202ENST00000595045 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
NOTCH3-202ENST00000595045 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
NOTCH3-202ENST00000595045 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
NOTCH3-202ENST00000595045 FOXN1O15353 648 aa13.3□□□□□ -0.28
NOTCH3-202ENST00000595045 PER1O15534 1290 aaPredicted RBP13.3□□□□□ -0.28
NOTCH3-202ENST00000595045 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
NOTCH3-202ENST00000595045 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
NOTCH3-202ENST00000595045 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
NOTCH3-202ENST00000595045 SCN11AQ9UI33 1791 aa13.3□□□□□ -0.28
NOTCH3-202ENST00000595045 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 SLC34A2O95436 690 aa13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 SERPINB2P05120 415 aa13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
NOTCH3-202ENST00000595045 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
NOTCH3-202ENST00000595045 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
NOTCH3-202ENST00000595045 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
NOTCH3-202ENST00000595045 NARFQ9UHQ1 456 aa13.28□□□□□ -0.28
NOTCH3-202ENST00000595045 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.28
NOTCH3-202ENST00000595045 H0YIN7 160 aa13.27□□□□□ -0.29
NOTCH3-202ENST00000595045 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
NOTCH3-202ENST00000595045 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
NOTCH3-202ENST00000595045 COL15A1P39059 1388 aa13.27□□□□□ -0.29
NOTCH3-202ENST00000595045 CNTNAP1P78357 1384 aa13.27□□□□□ -0.29
NOTCH3-202ENST00000595045 HMOX1P09601 288 aa13.26□□□□□ -0.29
NOTCH3-202ENST00000595045 KIF7Q2M1P5 1343 aa13.26□□□□□ -0.29
NOTCH3-202ENST00000595045 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
NOTCH3-202ENST00000595045 ANKRD31Q8N7Z5 1873 aa13.26□□□□□ -0.29
NOTCH3-202ENST00000595045 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
NOTCH3-202ENST00000595045 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
NOTCH3-202ENST00000595045 MRC1P22897 1456 aa13.25□□□□□ -0.29
NOTCH3-202ENST00000595045 C21orf2O43822 256 aa13.24□□□□□ -0.29
NOTCH3-202ENST00000595045 CTCFP49711 727 aaPredicted RBP13.24□□□□□ -0.29
NOTCH3-202ENST00000595045 ZNF622Q969S3 477 aaKnown RBP eCLIP13.24□□□□□ -0.29
NOTCH3-202ENST00000595045 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
NOTCH3-202ENST00000595045 COL11A2P13942 1736 aaPredicted RBP13.24□□□□□ -0.29
NOTCH3-202ENST00000595045 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 DDNO94850 711 aaPredicted RBP13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 BICDL1Q6ZP65 573 aa13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
NOTCH3-202ENST00000595045 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
NOTCH3-202ENST00000595045 VEGFBP49765 207 aa13.22□□□□□ -0.29
NOTCH3-202ENST00000595045 CACNA1SQ13698 1873 aa13.21□□□□□ -0.29
NOTCH3-202ENST00000595045 SLX4Q8IY92 1834 aa13.21□□□□□ -0.29
NOTCH3-202ENST00000595045 LBX1P52954 281 aa13.21□□□□□ -0.29
NOTCH3-202ENST00000595045 LDHDQ86WU2 507 aa13.21□□□□□ -0.29
NOTCH3-202ENST00000595045 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
NOTCH3-202ENST00000595045 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
NOTCH3-202ENST00000595045 SCN4AP35499 1836 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 PDE6BP35913 854 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 FAM161AQ3B820 660 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 TBC1D9BQ66K14 1250 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
NOTCH3-202ENST00000595045 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
NOTCH3-202ENST00000595045 TMEM88BA6NKF7 163 aa13.19□□□□□ -0.3
NOTCH3-202ENST00000595045 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
NOTCH3-202ENST00000595045 CC2D1BQ5T0F9 858 aaKnown RBP13.19□□□□□ -0.3
NOTCH3-202ENST00000595045 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
NOTCH3-202ENST00000595045 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 KCNQ3O43525 872 aa13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
NOTCH3-202ENST00000595045 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms