RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FKBP5Q13451 457 aaPredicted RBP26.37■■□□□ 1.81
PNKP-203ENST00000593946 PRIM1P49642 420 aaKnown RBP26.36■■□□□ 1.81
PNKP-203ENST00000593946 DDX21Q9NR30 783 aaKnown RBP eCLIP26.36■■□□□ 1.81
PNKP-203ENST00000593946 ATG3Q9NT62 314 aa26.36■■□□□ 1.81
PNKP-203ENST00000593946 ASAP1Q9ULH1 1129 aa26.36■■□□□ 1.81
PNKP-203ENST00000593946 USP16Q9Y5T5 823 aa26.36■■□□□ 1.81
PNKP-203ENST00000593946 PXDNLA1KZ92 1463 aa26.36■■□□□ 1.81
PNKP-203ENST00000593946 ZBTB40Q9NUA8 1239 aa26.36■■□□□ 1.81
PNKP-203ENST00000593946 ONECUT3O60422 494 aaPredicted RBP26.35■■□□□ 1.81
PNKP-203ENST00000593946 ANXA1P04083 346 aa26.35■■□□□ 1.81
PNKP-203ENST00000593946 PDIA6Q15084 440 aa26.35■■□□□ 1.81
PNKP-203ENST00000593946 PROSER3Q2NL68 480 aa26.35■■□□□ 1.81
PNKP-203ENST00000593946 F6X3S4 739 aa26.34■■□□□ 1.81
PNKP-203ENST00000593946 PTCD1O75127 700 aaKnown RBP26.34■■□□□ 1.81
PNKP-203ENST00000593946 HYPKQ9NX55 129 aa26.34■■□□□ 1.81
PNKP-203ENST00000593946 ZBTB7BO15156 539 aaPredicted RBP26.34■■□□□ 1.81
PNKP-203ENST00000593946 SYTL4Q96C24 671 aaPredicted RBP26.34■■□□□ 1.81
PNKP-203ENST00000593946 CHMP4BQ9H444 224 aaKnown RBP26.34■■□□□ 1.81
PNKP-203ENST00000593946 A0A0G2JS52 829 aa26.33■■□□□ 1.81
PNKP-203ENST00000593946 MYT1Q01538 1121 aa26.33■■□□□ 1.81
PNKP-203ENST00000593946 KDM2BQ8NHM5 1336 aa26.32■■□□□ 1.8
PNKP-203ENST00000593946 QTRT2Q9H974 415 aaKnown RBP26.32■■□□□ 1.8
PNKP-203ENST00000593946 PCDHB15Q9Y5E8 787 aa26.32■■□□□ 1.8
PNKP-203ENST00000593946 VSIG10Q8N0Z9 540 aa26.31■■□□□ 1.8
PNKP-203ENST00000593946 ERBB4Q15303 1308 aa26.31■■□□□ 1.8
PNKP-203ENST00000593946 CCT4P50991 539 aaKnown RBP26.31■■□□□ 1.8
PNKP-203ENST00000593946 ACSBG1Q96GR2 724 aa26.3■■□□□ 1.8
PNKP-203ENST00000593946 TJP1Q07157 1748 aa26.29■■□□□ 1.8
PNKP-203ENST00000593946 SLC4A10Q6U841 1118 aa26.29■■□□□ 1.8
PNKP-203ENST00000593946 LRP10Q7Z4F1 713 aa26.29■■□□□ 1.8
PNKP-203ENST00000593946 ADCY9O60503 1353 aa26.28■■□□□ 1.8
PNKP-203ENST00000593946 SBF2Q86WG5 1849 aa26.28■■□□□ 1.8
PNKP-203ENST00000593946 NHSQ6T4R5 1651 aa26.28■■□□□ 1.8
PNKP-203ENST00000593946 CICQ96RK0 1608 aaPredicted RBP26.28■■□□□ 1.8
PNKP-203ENST00000593946 CENPQQ7L2Z9 268 aaPredicted RBP26.28■■□□□ 1.8
PNKP-203ENST00000593946 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
PNKP-203ENST00000593946 PI4KAP2A4QPH2 592 aa26.26■■□□□ 1.79
PNKP-203ENST00000593946 PI4KAP1Q8N8J0 262 aa26.26■■□□□ 1.79
PNKP-203ENST00000593946 TEX13AQ9BXU3 409 aaPredicted RBP26.26■■□□□ 1.79
PNKP-203ENST00000593946 BRWD3Q6RI45 1802 aa26.26■■□□□ 1.79
PNKP-203ENST00000593946 IGHDP01880 384 aa26.25■■□□□ 1.79
PNKP-203ENST00000593946 MYL6BP14649 208 aa26.25■■□□□ 1.79
PNKP-203ENST00000593946 SEPT12Q8IYM1 358 aa26.25■■□□□ 1.79
PNKP-203ENST00000593946 DNAAF4Q8WXU2 420 aa26.25■■□□□ 1.79
PNKP-203ENST00000593946 RBM42Q9BTD8 480 aaKnown RBP26.25■■□□□ 1.79
PNKP-203ENST00000593946 ATP10DQ9P241 1426 aa26.24■■□□□ 1.79
PNKP-203ENST00000593946 SLC4A9Q96Q91 983 aa26.24■■□□□ 1.79
PNKP-203ENST00000593946 BTAF1O14981 1849 aa26.24■■□□□ 1.79
PNKP-203ENST00000593946 ARFGEF2Q9Y6D5 1785 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 NBPF26B4DH59 902 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 KCNQ2O43526 872 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 NBPF14Q5TI25 921 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 NBPF10Q6P3W6 841 aaKnown RBP26.23■■□□□ 1.79
PNKP-203ENST00000593946 KSR2Q6VAB6 950 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 NBPF15Q8N660 670 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
PNKP-203ENST00000593946 DDX58O95786 925 aaKnown RBP26.22■■□□□ 1.79
PNKP-203ENST00000593946 PIP4K2AP48426 406 aaPredicted RBP26.22■■□□□ 1.79
PNKP-203ENST00000593946 ZNF772Q68DY9 489 aaPredicted RBP26.22■■□□□ 1.79
PNKP-203ENST00000593946 DNAJC10Q8IXB1 793 aa26.22■■□□□ 1.79
PNKP-203ENST00000593946 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
PNKP-203ENST00000593946 XAGE3Q8WTP9 111 aa26.22■■□□□ 1.79
PNKP-203ENST00000593946 A1BGP04217 495 aa26.21■■□□□ 1.79
PNKP-203ENST00000593946 COPS6Q7L5N1 327 aa26.21■■□□□ 1.79
PNKP-203ENST00000593946 MEIS3Q99687 375 aa26.21■■□□□ 1.79
PNKP-203ENST00000593946 AIMP1Q12904 312 aaKnown RBP26.2■■□□□ 1.79
PNKP-203ENST00000593946 RWDD1Q9H446 243 aaPredicted RBP26.2■■□□□ 1.79
PNKP-203ENST00000593946 MAP3K2Q9Y2U5 619 aa26.2■■□□□ 1.79
PNKP-203ENST00000593946 NUP188Q5SRE5 1749 aa26.2■■□□□ 1.78
PNKP-203ENST00000593946 HDAC1Q13547 482 aaPredicted RBP26.19■■□□□ 1.78
PNKP-203ENST00000593946 BEND3Q5T5X7 828 aa26.19■■□□□ 1.78
PNKP-203ENST00000593946 PALLDQ8WX93 1383 aa26.19■■□□□ 1.78
PNKP-203ENST00000593946 STARD3NLO95772 234 aa26.19■■□□□ 1.78
PNKP-203ENST00000593946 SRCIN1Q9C0H9 1055 aa26.19■■□□□ 1.78
PNKP-203ENST00000593946 C1orf115Q9H7X2 142 aa26.19■■□□□ 1.78
PNKP-203ENST00000593946 SMARCC1Q92922 1105 aaPredicted RBP26.18■■□□□ 1.78
PNKP-203ENST00000593946 COL5A3P25940 1745 aaPredicted RBP26.17■■□□□ 1.78
PNKP-203ENST00000593946 FAM182BQ5T319 152 aa26.17■■□□□ 1.78
PNKP-203ENST00000593946 RREB1Q92766 1687 aa26.16■■□□□ 1.78
PNKP-203ENST00000593946 CYP19A1P11511 503 aaPredicted RBP26.16■■□□□ 1.78
PNKP-203ENST00000593946 AFDNP55196 1824 aaKnown RBP26.15■■□□□ 1.78
PNKP-203ENST00000593946 LOC102724428A0A0B4J2F2 783 aa26.15■■□□□ 1.78
PNKP-203ENST00000593946 SIK1P57059 783 aa26.15■■□□□ 1.78
PNKP-203ENST00000593946 RBM6P78332 1123 aaKnown RBP26.15■■□□□ 1.78
PNKP-203ENST00000593946 ANKRD13DQ6ZTN6 518 aa26.15■■□□□ 1.78
PNKP-203ENST00000593946 RIC3Q7Z5B4 369 aa26.15■■□□□ 1.78
PNKP-203ENST00000593946 GNAI3P08754 354 aa26.14■■□□□ 1.78
PNKP-203ENST00000593946 USP44Q9H0E7 712 aa26.14■■□□□ 1.78
PNKP-203ENST00000593946 ALDH1L1O75891 902 aa26.14■■□□□ 1.77
PNKP-203ENST00000593946 IBTKQ9P2D0 1353 aaPredicted RBP26.13■■□□□ 1.77
PNKP-203ENST00000593946 MYH14Q7Z406 1995 aaKnown RBP26.13■■□□□ 1.77
PNKP-203ENST00000593946 PTF1AQ7RTS3 328 aa26.13■■□□□ 1.77
PNKP-203ENST00000593946 LY75O60449 1722 aa26.12■■□□□ 1.77
PNKP-203ENST00000593946 SIRT2Q8IXJ6 389 aa26.12■■□□□ 1.77
PNKP-203ENST00000593946 LINS1Q8NG48 757 aa26.12■■□□□ 1.77
PNKP-203ENST00000593946 PLBD2Q8NHP8 589 aa26.12■■□□□ 1.77
PNKP-203ENST00000593946 METTL22Q9BUU2 404 aaPredicted RBP26.11■■□□□ 1.77
PNKP-203ENST00000593946 ATP6V1AP38606 617 aa26.11■■□□□ 1.77
PNKP-203ENST00000593946 EP400Q96L91 3159 aa26.11■■□□□ 1.77
PNKP-203ENST00000593946 GNAI2P04899 355 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms