RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 TTLL6Q8N841 843 aa12.7□□□□□ -0.38
SRRM1-221ENST00000593639 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
SRRM1-221ENST00000593639 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
SRRM1-221ENST00000593639 SERPINB2P05120 415 aa12.68□□□□□ -0.38
SRRM1-221ENST00000593639 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
SRRM1-221ENST00000593639 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
SRRM1-221ENST00000593639 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
SRRM1-221ENST00000593639 CARMIL3Q8ND23 1372 aa12.68□□□□□ -0.38
SRRM1-221ENST00000593639 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
SRRM1-221ENST00000593639 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
SRRM1-221ENST00000593639 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
SRRM1-221ENST00000593639 H0YIN7 160 aa12.66□□□□□ -0.38
SRRM1-221ENST00000593639 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
SRRM1-221ENST00000593639 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
SRRM1-221ENST00000593639 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
SRRM1-221ENST00000593639 COL15A1P39059 1388 aa12.66□□□□□ -0.38
SRRM1-221ENST00000593639 TJP1Q07157 1748 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 FOXN1O15353 648 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 ERFEQ4G0M1 354 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 POLR3GLQ9BT43 218 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 SBF1O95248 1867 aa12.65□□□□□ -0.38
SRRM1-221ENST00000593639 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
SRRM1-221ENST00000593639 C21orf2O43822 256 aa12.63□□□□□ -0.39
SRRM1-221ENST00000593639 AKAP4Q5JQC9 854 aa12.63□□□□□ -0.39
SRRM1-221ENST00000593639 ZNF622Q969S3 477 aaKnown RBP eCLIP12.63□□□□□ -0.392e-17■■■□□ 15.2
SRRM1-221ENST00000593639 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-221ENST00000593639 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
SRRM1-221ENST00000593639 DDNO94850 711 aaPredicted RBP12.62□□□□□ -0.39
SRRM1-221ENST00000593639 IL13P35225 146 aa12.62□□□□□ -0.39
SRRM1-221ENST00000593639 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
SRRM1-221ENST00000593639 PRDM10Q9NQV6 1147 aa12.62□□□□□ -0.39
SRRM1-221ENST00000593639 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
SRRM1-221ENST00000593639 SLC34A2O95436 690 aa12.61□□□□□ -0.39
SRRM1-221ENST00000593639 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
SRRM1-221ENST00000593639 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
SRRM1-221ENST00000593639 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
SRRM1-221ENST00000593639 PANK3Q9H999 370 aa12.61□□□□□ -0.39
SRRM1-221ENST00000593639 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
SRRM1-221ENST00000593639 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
SRRM1-221ENST00000593639 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
SRRM1-221ENST00000593639 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
SRRM1-221ENST00000593639 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
SRRM1-221ENST00000593639 LTBP3Q9NS15 1303 aa12.6□□□□□ -0.39
SRRM1-221ENST00000593639 MRC1P22897 1456 aa12.59□□□□□ -0.39
SRRM1-221ENST00000593639 PDE6BP35913 854 aa12.59□□□□□ -0.39
SRRM1-221ENST00000593639 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
SRRM1-221ENST00000593639 VEGFBP49765 207 aa12.59□□□□□ -0.39
SRRM1-221ENST00000593639 MORC1Q86VD1 984 aa12.59□□□□□ -0.39
SRRM1-221ENST00000593639 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
SRRM1-221ENST00000593639 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
SRRM1-221ENST00000593639 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
SRRM1-221ENST00000593639 AIDAQ96BJ3 306 aa12.58□□□□□ -0.4
SRRM1-221ENST00000593639 TAF1DQ9H5J8 278 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-221ENST00000593639 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
SRRM1-221ENST00000593639 STARD3NLO95772 234 aa12.57□□□□□ -0.4
SRRM1-221ENST00000593639 LBX1P52954 281 aa12.57□□□□□ -0.4
SRRM1-221ENST00000593639 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
SRRM1-221ENST00000593639 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
SRRM1-221ENST00000593639 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
SRRM1-221ENST00000593639 DLEC1Q9Y238 1755 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 A0A087WZG4 1122 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 IQCA1LA6NCM1 817 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 TMEM88BA6NKF7 163 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-221ENST00000593639 HMOX1P09601 288 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
SRRM1-221ENST00000593639 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-221ENST00000593639 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
SRRM1-221ENST00000593639 SRGNP10124 158 aa12.55□□□□□ -0.4
SRRM1-221ENST00000593639 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
SRRM1-221ENST00000593639 HSPA8P11142 646 aaKnown RBP12.54□□□□□ -0.4
SRRM1-221ENST00000593639 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
SRRM1-221ENST00000593639 EAPPQ56P03 285 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-221ENST00000593639 CNBD1Q8NA66 436 aa12.54□□□□□ -0.4
SRRM1-221ENST00000593639 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
SRRM1-221ENST00000593639 ABHD8Q96I13 439 aa12.54□□□□□ -0.4
SRRM1-221ENST00000593639 ZNF496Q96IT1 587 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-221ENST00000593639 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-221ENST00000593639 ZNF541Q9H0D2 1346 aa12.54□□□□□ -0.4
SRRM1-221ENST00000593639 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
SRRM1-221ENST00000593639 SOGA3Q5TF21 947 aa12.53□□□□□ -0.4
SRRM1-221ENST00000593639 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
SRRM1-221ENST00000593639 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
SRRM1-221ENST00000593639 SETDB2Q96T68 719 aa12.53□□□□□ -0.4
SRRM1-221ENST00000593639 SCN11AQ9UI33 1791 aa12.53□□□□□ -0.4
SRRM1-221ENST00000593639 RASSF10A6NK89 507 aa12.52□□□□□ -0.41
SRRM1-221ENST00000593639 IL6STP40189 918 aaPredicted RBP12.52□□□□□ -0.41
SRRM1-221ENST00000593639 ST5P78524 1137 aa12.52□□□□□ -0.41
SRRM1-221ENST00000593639 ZNF277Q9NRM2 450 aaPredicted RBP12.52□□□□□ -0.41
SRRM1-221ENST00000593639 HEG1Q9ULI3 1381 aa12.52□□□□□ -0.41
SRRM1-221ENST00000593639 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-221ENST00000593639 NPHP1O15259 732 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 A1BGP04217 495 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 EPHX2P34913 555 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms