RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
ZNF540-210ENST00000592533 CEBPAP49715 358 aaPredicted RBP14.1□□□□□ -0.15
ZNF540-210ENST00000592533 PI4K2BQ8TCG2 481 aa14.1□□□□□ -0.15
ZNF540-210ENST00000592533 ANO2Q9NQ90 1003 aa14.1□□□□□ -0.15
ZNF540-210ENST00000592533 NAP1L5Q96NT1 182 aaPredicted RBP14.1□□□□□ -0.15
ZNF540-210ENST00000592533 TRIM6-TRIM34B2RNG4 842 aa14.1□□□□□ -0.15
ZNF540-210ENST00000592533 PRIM1P49642 420 aaKnown RBP14.1□□□□□ -0.15
ZNF540-210ENST00000592533 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
ZNF540-210ENST00000592533 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
ZNF540-210ENST00000592533 RAD50Q92878 1312 aa14.09□□□□□ -0.15
ZNF540-210ENST00000592533 IP6K1Q92551 441 aa14.09□□□□□ -0.15
ZNF540-210ENST00000592533 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
ZNF540-210ENST00000592533 ZNF142P52746 1687 aaPredicted RBP14.09□□□□□ -0.15
ZNF540-210ENST00000592533 PPP1R42Q7Z4L9 355 aa14.08□□□□□ -0.15
ZNF540-210ENST00000592533 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.15
ZNF540-210ENST00000592533 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
ZNF540-210ENST00000592533 ABTB2Q8N961 1025 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 KIF1BPQ96EK5 621 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 PHAXQ9H814 394 aaKnown RBP14.08□□□□□ -0.16
ZNF540-210ENST00000592533 SGSM2O43147 1006 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 KCNA6P17658 529 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 MTX1Q13505 466 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 BEND3Q5T5X7 828 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 IL25Q9H293 177 aa14.08□□□□□ -0.16
ZNF540-210ENST00000592533 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
ZNF540-210ENST00000592533 RBM27Q9P2N5 1060 aaKnown RBP14.07□□□□□ -0.16
ZNF540-210ENST00000592533 HSP90AB4PQ58FF6 505 aa14.07□□□□□ -0.16
ZNF540-210ENST00000592533 TMEM87AQ8NBN3 555 aa14.07□□□□□ -0.16
ZNF540-210ENST00000592533 SLIT3O75094 1523 aa14.07□□□□□ -0.16
ZNF540-210ENST00000592533 TTC14Q96N46 770 aa14.06□□□□□ -0.16
ZNF540-210ENST00000592533 NOL7Q9UMY1 257 aaKnown RBP14.06□□□□□ -0.16
ZNF540-210ENST00000592533 NSFL1CQ9UNZ2 370 aaKnown RBP14.06□□□□□ -0.16
ZNF540-210ENST00000592533 TTC41PQ6P2S7 1318 aa14.06□□□□□ -0.16
ZNF540-210ENST00000592533 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
ZNF540-210ENST00000592533 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
ZNF540-210ENST00000592533 ADCY9O60503 1353 aa14.06□□□□□ -0.16
ZNF540-210ENST00000592533 SETD1BQ9UPS6 1966 aaKnown RBP14.06□□□□□ -0.16
ZNF540-210ENST00000592533 TERF1P54274 439 aa14.06□□□□□ -0.16
ZNF540-210ENST00000592533 DNAAF4Q8WXU2 420 aa14.06□□□□□ -0.16
ZNF540-210ENST00000592533 LSG1Q9H089 658 aaKnown RBP14.06□□□□□ -0.16
ZNF540-210ENST00000592533 RPAP1Q9BWH6 1393 aaPredicted RBP14.05□□□□□ -0.16
ZNF540-210ENST00000592533 HEG1Q9ULI3 1381 aa14.05□□□□□ -0.16
ZNF540-210ENST00000592533 SURF6O75683 361 aaKnown RBP14.05□□□□□ -0.16
ZNF540-210ENST00000592533 TPM2P07951 284 aa14.05□□□□□ -0.16
ZNF540-210ENST00000592533 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
ZNF540-210ENST00000592533 ZNF500O60304 480 aaPredicted RBP14.05□□□□□ -0.16
ZNF540-210ENST00000592533 OFD1O75665 1012 aa14.05□□□□□ -0.16
ZNF540-210ENST00000592533 NUTM1Q86Y26 1132 aa14.05□□□□□ -0.16
ZNF540-210ENST00000592533 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 MCM5P33992 734 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 CNTROBQ8N137 903 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 SYCE3A1L190 88 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 SYAP1Q96A49 352 aaPredicted RBP14.04□□□□□ -0.16
ZNF540-210ENST00000592533 PHF8Q9UPP1 1060 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 NBPF7P0C2Y1 421 aaPredicted RBP14.04□□□□□ -0.16
ZNF540-210ENST00000592533 AKAP4Q5JQC9 854 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 CHAMP1Q96JM3 812 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 CHPF2Q9P2E5 772 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
ZNF540-210ENST00000592533 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
ZNF540-210ENST00000592533 KCNB2Q92953 911 aa14.03□□□□□ -0.16
ZNF540-210ENST00000592533 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
ZNF540-210ENST00000592533 UPF3BQ9BZI7 483 aaKnown RBP14.03□□□□□ -0.16
ZNF540-210ENST00000592533 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
ZNF540-210ENST00000592533 MSNP26038 577 aaKnown RBP14.03□□□□□ -0.16
ZNF540-210ENST00000592533 UBE2Q2Q8WVN8 375 aa14.03□□□□□ -0.16
ZNF540-210ENST00000592533 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
ZNF540-210ENST00000592533 TRPM3Q9HCF6 1732 aaPredicted RBP14.03□□□□□ -0.16
ZNF540-210ENST00000592533 USHBP1Q8N6Y0 703 aa14.02□□□□□ -0.16
ZNF540-210ENST00000592533 KCNH5Q8NCM2 988 aa14.02□□□□□ -0.16
ZNF540-210ENST00000592533 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.16
ZNF540-210ENST00000592533 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
ZNF540-210ENST00000592533 ALDH1L1O75891 902 aa14.02□□□□□ -0.17
ZNF540-210ENST00000592533 GLRX3O76003 335 aaKnown RBP14.02□□□□□ -0.17
ZNF540-210ENST00000592533 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.17
ZNF540-210ENST00000592533 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
ZNF540-210ENST00000592533 LGR6Q9HBX8 967 aa14.02□□□□□ -0.17
ZNF540-210ENST00000592533 PHF14O94880 888 aa14.01□□□□□ -0.17
ZNF540-210ENST00000592533 PXDNQ92626 1479 aa14.01□□□□□ -0.17
ZNF540-210ENST00000592533 RRP9O43818 475 aaKnown RBP14.01□□□□□ -0.17
ZNF540-210ENST00000592533 MRC1P22897 1456 aa14.01□□□□□ -0.17
ZNF540-210ENST00000592533 SCN11AQ9UI33 1791 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 TSPY26PQ9H489 355 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
ZNF540-210ENST00000592533 HDAC5Q9UQL6 1122 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 UTYO14607 1347 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 TM6SF1Q9BZW5 370 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 LIMCH1Q9UPQ0 1083 aa14□□□□□ -0.17
ZNF540-210ENST00000592533 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
ZNF540-210ENST00000592533 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
ZNF540-210ENST00000592533 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
ZNF540-210ENST00000592533 CCDC39Q9UFE4 941 aa13.99□□□□□ -0.17
ZNF540-210ENST00000592533 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
ZNF540-210ENST00000592533 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
ZNF540-210ENST00000592533 RUFY3Q7L099 469 aa13.99□□□□□ -0.17
ZNF540-210ENST00000592533 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
ZNF540-210ENST00000592533 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms