RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
VMP1-214ENST00000592106 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
VMP1-214ENST00000592106 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
VMP1-214ENST00000592106 ZPR1O75312 459 aa13.63□□□□□ -0.23
VMP1-214ENST00000592106 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
VMP1-214ENST00000592106 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
VMP1-214ENST00000592106 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
VMP1-214ENST00000592106 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
VMP1-214ENST00000592106 KIAA1551Q9HCM1 1747 aa13.62□□□□□ -0.23
VMP1-214ENST00000592106 TEFQ10587 303 aa13.62□□□□□ -0.23
VMP1-214ENST00000592106 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
VMP1-214ENST00000592106 DNAJC10Q8IXB1 793 aa13.62□□□□□ -0.23
VMP1-214ENST00000592106 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
VMP1-214ENST00000592106 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
VMP1-214ENST00000592106 N4BP2Q86UW6 1770 aaPredicted RBP13.62□□□□□ -0.23
VMP1-214ENST00000592106 COL15A1P39059 1388 aa13.61□□□□□ -0.23
VMP1-214ENST00000592106 KCPQ6ZWJ8 1503 aa13.61□□□□□ -0.23
VMP1-214ENST00000592106 FCHSD2O94868 740 aa13.61□□□□□ -0.23
VMP1-214ENST00000592106 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
VMP1-214ENST00000592106 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
VMP1-214ENST00000592106 A0A0G2JLW4 131 aa13.6□□□□□ -0.23
VMP1-214ENST00000592106 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
VMP1-214ENST00000592106 DPEP1P16444 411 aa13.6□□□□□ -0.23
VMP1-214ENST00000592106 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
VMP1-214ENST00000592106 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
VMP1-214ENST00000592106 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
VMP1-214ENST00000592106 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
VMP1-214ENST00000592106 UBR2Q8IWV8 1755 aa13.59□□□□□ -0.23
VMP1-214ENST00000592106 CYP19A1P11511 503 aaPredicted RBP13.59□□□□□ -0.23
VMP1-214ENST00000592106 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
VMP1-214ENST00000592106 PIM2Q9P1W9 311 aa13.59□□□□□ -0.23
VMP1-214ENST00000592106 STARD3NLO95772 234 aa13.58□□□□□ -0.24
VMP1-214ENST00000592106 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
VMP1-214ENST00000592106 ARHGAP27Q6ZUM4 889 aa13.58□□□□□ -0.24
VMP1-214ENST00000592106 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
VMP1-214ENST00000592106 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
VMP1-214ENST00000592106 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
VMP1-214ENST00000592106 UTRNP46939 3433 aa13.57□□□□□ -0.24
VMP1-214ENST00000592106 A0A087WZG4 1122 aa13.57□□□□□ -0.24
VMP1-214ENST00000592106 POLRMTO00411 1230 aaKnown RBP13.57□□□□□ -0.24
VMP1-214ENST00000592106 DDR1Q08345 913 aa13.57□□□□□ -0.24
VMP1-214ENST00000592106 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
VMP1-214ENST00000592106 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
VMP1-214ENST00000592106 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
VMP1-214ENST00000592106 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
VMP1-214ENST00000592106 HEG1Q9ULI3 1381 aa13.56□□□□□ -0.24
VMP1-214ENST00000592106 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
VMP1-214ENST00000592106 TM4SF1P30408 202 aa13.55□□□□□ -0.24
VMP1-214ENST00000592106 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
VMP1-214ENST00000592106 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
VMP1-214ENST00000592106 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
VMP1-214ENST00000592106 SIPA1L3O60292 1781 aaPredicted RBP13.54□□□□□ -0.24
VMP1-214ENST00000592106 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
VMP1-214ENST00000592106 CEMIPQ8WUJ3 1361 aa13.54□□□□□ -0.24
VMP1-214ENST00000592106 NEFMP07197 916 aa13.53□□□□□ -0.24
VMP1-214ENST00000592106 NFIXQ14938 502 aa13.53□□□□□ -0.24
VMP1-214ENST00000592106 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
VMP1-214ENST00000592106 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
VMP1-214ENST00000592106 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
VMP1-214ENST00000592106 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
VMP1-214ENST00000592106 SERPINB2P05120 415 aa13.52□□□□□ -0.25
VMP1-214ENST00000592106 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.25
VMP1-214ENST00000592106 HSPA6P17066 643 aa13.52□□□□□ -0.25
VMP1-214ENST00000592106 KCNA3P22001 575 aa13.52□□□□□ -0.25
VMP1-214ENST00000592106 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.25
VMP1-214ENST00000592106 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
VMP1-214ENST00000592106 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
VMP1-214ENST00000592106 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
VMP1-214ENST00000592106 SCN7AQ01118 1682 aa13.52□□□□□ -0.25
VMP1-214ENST00000592106 AFDNP55196 1824 aaKnown RBP13.51□□□□□ -0.25
VMP1-214ENST00000592106 KIF3CO14782 793 aa13.51□□□□□ -0.25
VMP1-214ENST00000592106 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
VMP1-214ENST00000592106 CHRNA5P30532 468 aa13.51□□□□□ -0.25
VMP1-214ENST00000592106 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
VMP1-214ENST00000592106 EIF5P55010 431 aaKnown RBP13.51□□□□□ -0.25
VMP1-214ENST00000592106 C9orf131Q5VYM1 1079 aa13.51□□□□□ -0.25
VMP1-214ENST00000592106 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
VMP1-214ENST00000592106 NPHP1O15259 732 aa13.5□□□□□ -0.25
VMP1-214ENST00000592106 C16orf71Q8IYS4 520 aaPredicted RBP13.5□□□□□ -0.25
VMP1-214ENST00000592106 RNF181Q9P0P0 153 aa13.5□□□□□ -0.25
VMP1-214ENST00000592106 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
VMP1-214ENST00000592106 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
VMP1-214ENST00000592106 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
VMP1-214ENST00000592106 H0YIN7 160 aa13.49□□□□□ -0.25
VMP1-214ENST00000592106 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
VMP1-214ENST00000592106 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
VMP1-214ENST00000592106 BCL2L12Q9HB09 334 aa13.49□□□□□ -0.25
VMP1-214ENST00000592106 ZC3H4Q9UPT8 1303 aaKnown RBP13.48□□□□□ -0.25
VMP1-214ENST00000592106 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
VMP1-214ENST00000592106 TOMM70O94826 608 aa13.48□□□□□ -0.25
VMP1-214ENST00000592106 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
VMP1-214ENST00000592106 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
VMP1-214ENST00000592106 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
VMP1-214ENST00000592106 PDE6BP35913 854 aa13.47□□□□□ -0.25
VMP1-214ENST00000592106 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
VMP1-214ENST00000592106 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
VMP1-214ENST00000592106 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.25
VMP1-214ENST00000592106 ST5P78524 1137 aa13.46□□□□□ -0.25
VMP1-214ENST00000592106 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.25
VMP1-214ENST00000592106 DZIP3Q86Y13 1208 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 302.9 ms