RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 EIF4G2P78344 907 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDF2-209ENST00000591903 TTLL6Q8N841 843 aa14.04□□□□□ -0.16
SDF2-209ENST00000591903 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
SDF2-209ENST00000591903 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
SDF2-209ENST00000591903 FER1L6Q2WGJ9 1857 aa14.04□□□□□ -0.16
SDF2-209ENST00000591903 FOXN1O15353 648 aa14.03□□□□□ -0.16
SDF2-209ENST00000591903 CTCFP49711 727 aaPredicted RBP14.03□□□□□ -0.16
SDF2-209ENST00000591903 AMOTQ4VCS5 1084 aa14.03□□□□□ -0.16
SDF2-209ENST00000591903 PLEKHO1Q53GL0 409 aaPredicted RBP14.03□□□□□ -0.16
SDF2-209ENST00000591903 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
SDF2-209ENST00000591903 MKRN1Q9UHC7 482 aaKnown RBP14.03□□□□□ -0.16
SDF2-209ENST00000591903 VIRMAQ69YN4 1812 aaKnown RBP14.03□□□□□ -0.16
SDF2-209ENST00000591903 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
SDF2-209ENST00000591903 CNTNAP1P78357 1384 aa14.02□□□□□ -0.17
SDF2-209ENST00000591903 POTECB2RU33 542 aa14.02□□□□□ -0.17
SDF2-209ENST00000591903 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
SDF2-209ENST00000591903 SCN4AP35499 1836 aa14.01□□□□□ -0.17
SDF2-209ENST00000591903 NFKBIEO00221 500 aa14□□□□□ -0.17
SDF2-209ENST00000591903 EIF4A2Q14240 407 aaKnown RBP14□□□□□ -0.17
SDF2-209ENST00000591903 USPL1Q5W0Q7 1092 aa14□□□□□ -0.17
SDF2-209ENST00000591903 ZNF530Q6P9A1 599 aaPredicted RBP14□□□□□ -0.17
SDF2-209ENST00000591903 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
SDF2-209ENST00000591903 POLKQ9UBT6 870 aa14□□□□□ -0.17
SDF2-209ENST00000591903 H0YIN7 160 aa13.99□□□□□ -0.17
SDF2-209ENST00000591903 MTHFSP49914 203 aa13.99□□□□□ -0.17
SDF2-209ENST00000591903 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
SDF2-209ENST00000591903 INTS5Q6P9B9 1019 aaKnown RBP13.99□□□□□ -0.17
SDF2-209ENST00000591903 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
SDF2-209ENST00000591903 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
SDF2-209ENST00000591903 NFIXQ14938 502 aa13.98□□□□□ -0.17
SDF2-209ENST00000591903 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
SDF2-209ENST00000591903 C2CD5Q86YS7 1000 aa13.98□□□□□ -0.17
SDF2-209ENST00000591903 NARFQ9UHQ1 456 aa13.98□□□□□ -0.17
SDF2-209ENST00000591903 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
SDF2-209ENST00000591903 IQCA1LA6NCM1 817 aa13.97□□□□□ -0.17
SDF2-209ENST00000591903 SERPINB2P05120 415 aa13.97□□□□□ -0.17
SDF2-209ENST00000591903 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
SDF2-209ENST00000591903 COL15A1P39059 1388 aa13.96□□□□□ -0.17
SDF2-209ENST00000591903 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.17
SDF2-209ENST00000591903 PASKQ96RG2 1323 aa13.96□□□□□ -0.17
SDF2-209ENST00000591903 LTBP3Q9NS15 1303 aa13.96□□□□□ -0.17
SDF2-209ENST00000591903 LDHDQ86WU2 507 aa13.96□□□□□ -0.17
SDF2-209ENST00000591903 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
SDF2-209ENST00000591903 TMEM88BA6NKF7 163 aa13.95□□□□□ -0.18
SDF2-209ENST00000591903 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
SDF2-209ENST00000591903 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
SDF2-209ENST00000591903 WBP1LQ9NX94 342 aa13.95□□□□□ -0.18
SDF2-209ENST00000591903 COL11A2P13942 1736 aaPredicted RBP13.94□□□□□ -0.18
SDF2-209ENST00000591903 VEGFBP49765 207 aa13.94□□□□□ -0.18
SDF2-209ENST00000591903 LBX1P52954 281 aa13.94□□□□□ -0.18
SDF2-209ENST00000591903 ABHD8Q96I13 439 aa13.94□□□□□ -0.18
SDF2-209ENST00000591903 TAOK3Q9H2K8 898 aa13.94□□□□□ -0.18
SDF2-209ENST00000591903 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
SDF2-209ENST00000591903 PDE6BP35913 854 aa13.93□□□□□ -0.18
SDF2-209ENST00000591903 DNAJC10Q8IXB1 793 aa13.93□□□□□ -0.18
SDF2-209ENST00000591903 C21orf2O43822 256 aa13.92□□□□□ -0.18
SDF2-209ENST00000591903 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
SDF2-209ENST00000591903 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
SDF2-209ENST00000591903 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
SDF2-209ENST00000591903 MAP2K1Q02750 393 aaPredicted RBP13.92□□□□□ -0.18
SDF2-209ENST00000591903 SOGA3Q5TF21 947 aa13.92□□□□□ -0.18
SDF2-209ENST00000591903 ZNF622Q969S3 477 aaKnown RBP eCLIP13.92□□□□□ -0.18
SDF2-209ENST00000591903 L3MBTL3Q96JM7 780 aaPredicted RBP13.92□□□□□ -0.18
SDF2-209ENST00000591903 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
SDF2-209ENST00000591903 MLLT1Q03111 559 aaPredicted RBP13.91□□□□□ -0.18
SDF2-209ENST00000591903 BRIP1Q9BX63 1249 aa13.91□□□□□ -0.18
SDF2-209ENST00000591903 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
SDF2-209ENST00000591903 MRC1P22897 1456 aa13.91□□□□□ -0.18
SDF2-209ENST00000591903 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
SDF2-209ENST00000591903 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
SDF2-209ENST00000591903 ADAMTSL1Q8N6G6 1762 aa13.91□□□□□ -0.18
SDF2-209ENST00000591903 SLX4Q8IY92 1834 aa13.9□□□□□ -0.18
SDF2-209ENST00000591903 HSPA8P11142 646 aaKnown RBP13.9□□□□□ -0.18
SDF2-209ENST00000591903 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
SDF2-209ENST00000591903 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
SDF2-209ENST00000591903 SLC52A2Q9HAB3 445 aa13.9□□□□□ -0.18
SDF2-209ENST00000591903 ZBTB1Q9Y2K1 713 aa13.9□□□□□ -0.18
SDF2-209ENST00000591903 A0A087WZG4 1122 aa13.89□□□□□ -0.19
SDF2-209ENST00000591903 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
SDF2-209ENST00000591903 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
SDF2-209ENST00000591903 RGS19P49795 217 aa13.89□□□□□ -0.19
SDF2-209ENST00000591903 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
SDF2-209ENST00000591903 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
SDF2-209ENST00000591903 THSD7BQ9C0I4 1608 aa13.89□□□□□ -0.19
SDF2-209ENST00000591903 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
SDF2-209ENST00000591903 DEFB115Q30KQ5 88 aa13.88□□□□□ -0.19
SDF2-209ENST00000591903 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
SDF2-209ENST00000591903 BICDL1Q6ZP65 573 aa13.87□□□□□ -0.19
SDF2-209ENST00000591903 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
SDF2-209ENST00000591903 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
SDF2-209ENST00000591903 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
SDF2-209ENST00000591903 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
SDF2-209ENST00000591903 AEBP1Q8IUX7 1158 aa13.86□□□□□ -0.19
SDF2-209ENST00000591903 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
SDF2-209ENST00000591903 TRPM7Q96QT4 1865 aa13.85□□□□□ -0.19
SDF2-209ENST00000591903 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
SDF2-209ENST00000591903 STARD3NLO95772 234 aa13.85□□□□□ -0.19
SDF2-209ENST00000591903 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
SDF2-209ENST00000591903 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
SDF2-209ENST00000591903 EAPPQ56P03 285 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms