RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 DPY19L2Q6NUT2 758 aa29.86■■■□□ 2.37
CAPNS1-205ENST00000588780 TJP1Q07157 1748 aa29.85■■■□□ 2.37
CAPNS1-205ENST00000588780 PCNTO95613 3336 aa29.84■■■□□ 2.37
CAPNS1-205ENST00000588780 H0YIN7 160 aa29.84■■■□□ 2.37
CAPNS1-205ENST00000588780 SERPINB2P05120 415 aa29.84■■■□□ 2.37
CAPNS1-205ENST00000588780 SULT6B1Q6IMI4 303 aa29.84■■■□□ 2.37
CAPNS1-205ENST00000588780 SOS1Q07889 1333 aaPredicted RBP29.84■■■□□ 2.37
CAPNS1-205ENST00000588780 NARFQ9UHQ1 456 aa29.83■■■□□ 2.37
CAPNS1-205ENST00000588780 ZNF219Q9P2Y4 722 aaPredicted RBP29.81■■■□□ 2.36
CAPNS1-205ENST00000588780 COL15A1P39059 1388 aa29.8■■■□□ 2.36
CAPNS1-205ENST00000588780 BICDL1Q6ZP65 573 aa29.8■■■□□ 2.36
CAPNS1-205ENST00000588780 MKRN1Q9UHC7 482 aaKnown RBP29.8■■■□□ 2.36
CAPNS1-205ENST00000588780 CYP19A1P11511 503 aaPredicted RBP29.79■■■□□ 2.36
CAPNS1-205ENST00000588780 ZNF622Q969S3 477 aaKnown RBP eCLIP29.79■■■□□ 2.36
CAPNS1-205ENST00000588780 TIAM2Q8IVF5 1701 aa29.79■■■□□ 2.36
CAPNS1-205ENST00000588780 AFDNP55196 1824 aaKnown RBP29.78■■■□□ 2.36
CAPNS1-205ENST00000588780 NFKBIEO00221 500 aa29.78■■■□□ 2.36
CAPNS1-205ENST00000588780 SLC39A6Q13433 755 aa29.78■■■□□ 2.36
CAPNS1-205ENST00000588780 MORC1Q86VD1 984 aa29.78■■■□□ 2.36
CAPNS1-205ENST00000588780 SLC52A2Q9HAB3 445 aa29.78■■■□□ 2.36
CAPNS1-205ENST00000588780 CCDC88AQ3V6T2 1871 aa29.77■■■□□ 2.36
CAPNS1-205ENST00000588780 ERFEQ4G0M1 354 aa29.77■■■□□ 2.36
CAPNS1-205ENST00000588780 ZBTB1Q9Y2K1 713 aa29.77■■■□□ 2.36
CAPNS1-205ENST00000588780 AKAP4Q5JQC9 854 aa29.76■■■□□ 2.35
CAPNS1-205ENST00000588780 ADAMTS7Q9UKP4 1686 aa29.76■■■□□ 2.35
CAPNS1-205ENST00000588780 CANXP27824 592 aaKnown RBP29.75■■■□□ 2.35
CAPNS1-205ENST00000588780 POTECB2RU33 542 aa29.74■■■□□ 2.35
CAPNS1-205ENST00000588780 PANK3Q9H999 370 aa29.74■■■□□ 2.35
CAPNS1-205ENST00000588780 LGR6Q9HBX8 967 aa29.74■■■□□ 2.35
CAPNS1-205ENST00000588780 C21orf2O43822 256 aa29.73■■■□□ 2.35
CAPNS1-205ENST00000588780 CHADLQ6NUI6 762 aa29.73■■■□□ 2.35
CAPNS1-205ENST00000588780 BCL2L12Q9HB09 334 aa29.73■■■□□ 2.35
CAPNS1-205ENST00000588780 CREBZFQ9NS37 354 aa29.73■■■□□ 2.35
CAPNS1-205ENST00000588780 SCN11AQ9UI33 1791 aa29.72■■■□□ 2.35
CAPNS1-205ENST00000588780 CARMIL3Q8ND23 1372 aa29.72■■■□□ 2.35
CAPNS1-205ENST00000588780 DLEC1Q9Y238 1755 aa29.72■■■□□ 2.35
CAPNS1-205ENST00000588780 NRXN2Q9P2S2 1712 aa29.69■■■□□ 2.34
CAPNS1-205ENST00000588780 NPHP1O15259 732 aa29.69■■■□□ 2.34
CAPNS1-205ENST00000588780 RNMTO43148 476 aaKnown RBP29.69■■■□□ 2.34
CAPNS1-205ENST00000588780 ZNF330Q9Y3S2 320 aaPredicted RBP29.69■■■□□ 2.34
CAPNS1-205ENST00000588780 PDE6BP35913 854 aa29.68■■■□□ 2.34
CAPNS1-205ENST00000588780 AIDAQ96BJ3 306 aa29.68■■■□□ 2.34
CAPNS1-205ENST00000588780 CCDC24Q8N4L8 307 aa29.67■■■□□ 2.34
CAPNS1-205ENST00000588780 A0A087WZG4 1122 aa29.66■■■□□ 2.34
CAPNS1-205ENST00000588780 IL13P35225 146 aa29.66■■■□□ 2.34
CAPNS1-205ENST00000588780 TAOK3Q9H2K8 898 aa29.66■■■□□ 2.34
CAPNS1-205ENST00000588780 PDZRN3Q9UPQ7 1066 aa29.66■■■□□ 2.34
CAPNS1-205ENST00000588780 FOXN1O15353 648 aa29.65■■■□□ 2.34
CAPNS1-205ENST00000588780 DDNO94850 711 aaPredicted RBP29.65■■■□□ 2.34
CAPNS1-205ENST00000588780 STARD3NLO95772 234 aa29.65■■■□□ 2.34
CAPNS1-205ENST00000588780 TTC5Q8N0Z6 440 aa29.65■■■□□ 2.34
CAPNS1-205ENST00000588780 POTEIP0CG38 1075 aa29.64■■■□□ 2.34
CAPNS1-205ENST00000588780 POTEJP0CG39 1038 aa29.64■■■□□ 2.34
CAPNS1-205ENST00000588780 TBC1D9BQ66K14 1250 aa29.64■■■□□ 2.34
CAPNS1-205ENST00000588780 VSIG10Q8N0Z9 540 aa29.64■■■□□ 2.34
CAPNS1-205ENST00000588780 BRIP1Q9BX63 1249 aa29.64■■■□□ 2.34
CAPNS1-205ENST00000588780 HMOX1P09601 288 aa29.63■■■□□ 2.33
CAPNS1-205ENST00000588780 NPM2Q86SE8 214 aaKnown RBP29.62■■■□□ 2.33
CAPNS1-205ENST00000588780 CNTNAP1P78357 1384 aa29.6■■■□□ 2.33
CAPNS1-205ENST00000588780 IQCA1LA6NCM1 817 aa29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 CTCFP49711 727 aaPredicted RBP29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 EIF5P55010 431 aaKnown RBP29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 PRR5LQ6MZQ0 368 aa29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 CNKSR1Q969H4 720 aa29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 PRDM10Q9NQV6 1147 aa29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 TBC1D2BQ9UPU7 963 aa29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 KNSTRNQ9Y448 316 aa29.59■■■□□ 2.33
CAPNS1-205ENST00000588780 MRC1P22897 1456 aa29.58■■■□□ 2.33
CAPNS1-205ENST00000588780 DICER1Q9UPY3 1922 aaKnown RBP29.57■■■□□ 2.32
CAPNS1-205ENST00000588780 LTBP3Q9NS15 1303 aa29.57■■■□□ 2.32
CAPNS1-205ENST00000588780 LDHDQ86WU2 507 aa29.57■■■□□ 2.32
CAPNS1-205ENST00000588780 CNBD1Q8NA66 436 aa29.57■■■□□ 2.32
CAPNS1-205ENST00000588780 MTHFSDQ2M296 383 aaKnown RBP29.56■■■□□ 2.32
CAPNS1-205ENST00000588780 EAPPQ56P03 285 aaPredicted RBP29.56■■■□□ 2.32
CAPNS1-205ENST00000588780 SOGA3Q5TF21 947 aa29.56■■■□□ 2.32
CAPNS1-205ENST00000588780 SETDB2Q96T68 719 aa29.56■■■□□ 2.32
CAPNS1-205ENST00000588780 FER1L6Q2WGJ9 1857 aa29.55■■■□□ 2.32
CAPNS1-205ENST00000588780 ST5P78524 1137 aa29.55■■■□□ 2.32
CAPNS1-205ENST00000588780 PRPF40BQ6NWY9 871 aaKnown RBP29.55■■■□□ 2.32
CAPNS1-205ENST00000588780 CLEC11AQ9Y240 323 aa29.55■■■□□ 2.32
CAPNS1-205ENST00000588780 ANKRD31Q8N7Z5 1873 aa29.55■■■□□ 2.32
CAPNS1-205ENST00000588780 TMEM88BA6NKF7 163 aa29.54■■■□□ 2.32
CAPNS1-205ENST00000588780 VEGFBP49765 207 aa29.54■■■□□ 2.32
CAPNS1-205ENST00000588780 EIF4G2P78344 907 aaKnown RBP eCLIP29.53■■■□□ 2.32
CAPNS1-205ENST00000588780 STYK1Q6J9G0 422 aa29.53■■■□□ 2.32
CAPNS1-205ENST00000588780 TAF1DQ9H5J8 278 aaPredicted RBP29.52■■■□□ 2.32
CAPNS1-205ENST00000588780 TIMELESSQ9UNS1 1208 aa29.52■■■□□ 2.32
CAPNS1-205ENST00000588780 COL11A2P13942 1736 aaPredicted RBP29.51■■■□□ 2.32
CAPNS1-205ENST00000588780 PASKQ96RG2 1323 aa29.51■■■□□ 2.32
CAPNS1-205ENST00000588780 VIRMAQ69YN4 1812 aaKnown RBP29.51■■■□□ 2.31
CAPNS1-205ENST00000588780 LBX1P52954 281 aa29.51■■■□□ 2.31
CAPNS1-205ENST00000588780 MASTLQ96GX5 879 aa29.51■■■□□ 2.31
CAPNS1-205ENST00000588780 TEX13AQ9BXU3 409 aaPredicted RBP29.51■■■□□ 2.31
CAPNS1-205ENST00000588780 HSPA5P11021 654 aaKnown RBP29.5■■■□□ 2.31
CAPNS1-205ENST00000588780 TEFQ10587 303 aa29.5■■■□□ 2.31
CAPNS1-205ENST00000588780 ZNF496Q96IT1 587 aaPredicted RBP29.5■■■□□ 2.31
CAPNS1-205ENST00000588780 SRGNP10124 158 aa29.48■■■□□ 2.31
CAPNS1-205ENST00000588780 CACNA1SQ13698 1873 aa29.48■■■□□ 2.31
CAPNS1-205ENST00000588780 SLX4Q8IY92 1834 aa29.48■■■□□ 2.31
CAPNS1-205ENST00000588780 IL6STP40189 918 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms