RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 SIL1Q9H173 461 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 SMC3Q9UQE7 1217 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 CHMLP26374 656 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 CNPY2Q9Y2B0 182 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 OVOS2A0A0J9YW53 1432 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 OVOS2Q6IE36 1432 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 MBD3O95983 291 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 GNAI3P08754 354 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 STK3Q13188 491 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 FBXW7Q969H0 707 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 GOLGA6L4A6NEF3 574 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 USP48Q86UV5 1035 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 CCDC83Q8IWF9 413 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 C9orf78Q9NZ63 289 aaPredicted RBP13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 ZKSCAN5Q9Y2L8 839 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 TTC12Q9H892 705 aaPredicted RBP13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 TUBGCP6Q96RT7 1819 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 ZNF500O60304 480 aaPredicted RBP13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 MCM2P49736 904 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 CUL4AQ13619 759 aa13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
RUNDC3A-203ENST00000587483 CAMK4Q16566 473 aa13.41□□□□□ -0.26
RUNDC3A-203ENST00000587483 EYA1Q99502 592 aa13.41□□□□□ -0.26
RUNDC3A-203ENST00000587483 IL25Q9H293 177 aa13.41□□□□□ -0.26
RUNDC3A-203ENST00000587483 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
RUNDC3A-203ENST00000587483 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
RUNDC3A-203ENST00000587483 TCHHQ07283 1943 aa13.4□□□□□ -0.26
RUNDC3A-203ENST00000587483 GIMAP6Q6P9H5 292 aa13.4□□□□□ -0.26
RUNDC3A-203ENST00000587483 TECPR2O15040 1411 aa13.4□□□□□ -0.26
RUNDC3A-203ENST00000587483 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.27
RUNDC3A-203ENST00000587483 TEFQ10587 303 aa13.4□□□□□ -0.27
RUNDC3A-203ENST00000587483 FAM173BQ6P4H8 233 aa13.4□□□□□ -0.27
RUNDC3A-203ENST00000587483 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.27
RUNDC3A-203ENST00000587483 USP6P35125 1406 aa13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 ATP8B2P98198 1209 aa13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 JAKMIP1Q96N16 626 aaKnown RBP13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 CCDC39Q9UFE4 941 aa13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 ARHGEF10O15013 1369 aa13.39□□□□□ -0.27
RUNDC3A-203ENST00000587483 ANAPC15P60006 121 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 INTS4Q96HW7 963 aaKnown RBP13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 SRCIN1Q9C0H9 1055 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
RUNDC3A-203ENST00000587483 AGLP35573 1532 aa13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 NBPF7P0C2Y1 421 aaPredicted RBP13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 CCDC8Q9H0W5 538 aaPredicted RBP13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
RUNDC3A-203ENST00000587483 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 TERF1P54274 439 aa13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 STAP2Q9UGK3 403 aa13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 WDR33Q9C0J8 1336 aaKnown RBP13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 USP44Q9H0E7 712 aa13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 AMOTL2Q9Y2J4 779 aa13.36□□□□□ -0.27
RUNDC3A-203ENST00000587483 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 SSH2Q76I76 1423 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 KCNQ3O43525 872 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 PHF14O94880 888 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 PIP4K2AP48426 406 aaPredicted RBP13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 AK2P54819 239 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 CNTROBQ8N137 903 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 RHPN1Q8TCX5 695 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 CHPF2Q9P2E5 772 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 FLT4P35916 1363 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 ADCY5O95622 1261 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 TOPAZ1Q8N9V7 1692 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 MCM5P33992 734 aa13.35□□□□□ -0.27
RUNDC3A-203ENST00000587483 HSPA4P34932 840 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 CSPP1Q1MSJ5 1256 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 BOLA2Q9H3K6 86 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms