RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 INTS4Q96HW7 963 aaKnown RBP20.51■□□□□ 0.87
PRKCSH-205ENST00000587327 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-205ENST00000587327 BRD1O95696 1058 aa20.51■□□□□ 0.87
PRKCSH-205ENST00000587327 CHAMP1Q96JM3 812 aa20.51■□□□□ 0.87
PRKCSH-205ENST00000587327 RBM27Q9P2N5 1060 aaKnown RBP20.51■□□□□ 0.87
PRKCSH-205ENST00000587327 AOX1Q06278 1338 aa20.5■□□□□ 0.87
PRKCSH-205ENST00000587327 KIF1AQ12756 1690 aa20.5■□□□□ 0.87
PRKCSH-205ENST00000587327 PXDNLA1KZ92 1463 aa20.5■□□□□ 0.87
PRKCSH-205ENST00000587327 CACNA1FO60840 1977 aa20.5■□□□□ 0.87
PRKCSH-205ENST00000587327 UBTFL1P0CB47 393 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-205ENST00000587327 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
PRKCSH-205ENST00000587327 SSH3Q8TE77 659 aa20.49■□□□□ 0.87
PRKCSH-205ENST00000587327 TMEM63CQ9P1W3 806 aa20.49■□□□□ 0.87
PRKCSH-205ENST00000587327 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
PRKCSH-205ENST00000587327 ZBTB7CA1YPR0 619 aa20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 EPB41L2O43491 1005 aaKnown RBP20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 HS1BP3Q53T59 392 aa20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 FOXD4L5Q5VV16 416 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 FOXD4L4Q8WXT5 416 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 CEMIPQ8WUJ3 1361 aa20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 PROSER2Q86WR7 435 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 PDLIM2Q96JY6 352 aa20.48■□□□□ 0.87
PRKCSH-205ENST00000587327 MBD3O95983 291 aa20.47■□□□□ 0.87
PRKCSH-205ENST00000587327 LRSAM1Q6UWE0 723 aa20.47■□□□□ 0.87
PRKCSH-205ENST00000587327 NSFL1CQ9UNZ2 370 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-205ENST00000587327 LMO7Q8WWI1 1683 aa20.47■□□□□ 0.87
PRKCSH-205ENST00000587327 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
PRKCSH-205ENST00000587327 GCP02774 474 aa20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 ARHGEF25Q86VW2 580 aa20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 RAB11FIP3O75154 756 aa20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 HDGFL1Q5TGJ6 251 aa20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
PRKCSH-205ENST00000587327 CAMTA1Q9Y6Y1 1673 aa20.45■□□□□ 0.86
PRKCSH-205ENST00000587327 UBE2Q2Q8WVN8 375 aa20.45■□□□□ 0.86
PRKCSH-205ENST00000587327 SYCE3A1L190 88 aa20.45■□□□□ 0.86
PRKCSH-205ENST00000587327 MSNP26038 577 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-205ENST00000587327 UPF3BQ9BZI7 483 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-205ENST00000587327 PHAXQ9H814 394 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-205ENST00000587327 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 HSPA4P34932 840 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 POLA2Q14181 598 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 NOL8Q76FK4 1167 aaKnown RBP20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 PPP1R42Q7Z4L9 355 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 IL25Q9H293 177 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 STRCP1A6NGW2 1772 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
PRKCSH-205ENST00000587327 SURF6O75683 361 aaKnown RBP20.43■□□□□ 0.86
PRKCSH-205ENST00000587327 MST1RQ04912 1400 aa20.43■□□□□ 0.86
PRKCSH-205ENST00000587327 PXDNQ92626 1479 aa20.43■□□□□ 0.86
PRKCSH-205ENST00000587327 PLEKHG5O94827 1062 aa20.42■□□□□ 0.86
PRKCSH-205ENST00000587327 KRT28Q7Z3Y7 464 aa20.42■□□□□ 0.86
PRKCSH-205ENST00000587327 C19orf44Q9H6X5 657 aa20.42■□□□□ 0.86
PRKCSH-205ENST00000587327 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
PRKCSH-205ENST00000587327 NOL7Q9UMY1 257 aaKnown RBP20.42■□□□□ 0.86
PRKCSH-205ENST00000587327 LMOD2Q6P5Q4 547 aa20.41■□□□□ 0.86
PRKCSH-205ENST00000587327 PI4K2BQ8TCG2 481 aa20.41■□□□□ 0.86
PRKCSH-205ENST00000587327 LGR6Q9HBX8 967 aa20.41■□□□□ 0.86
PRKCSH-205ENST00000587327 OFD1O75665 1012 aa20.4■□□□□ 0.86
PRKCSH-205ENST00000587327 SRGAP3O43295 1099 aa20.39■□□□□ 0.86
PRKCSH-205ENST00000587327 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.86
PRKCSH-205ENST00000587327 TMEM94Q12767 1356 aa20.39■□□□□ 0.85
PRKCSH-205ENST00000587327 SGSM2O43147 1006 aa20.39■□□□□ 0.85
PRKCSH-205ENST00000587327 TPM2P07951 284 aa20.39■□□□□ 0.85
PRKCSH-205ENST00000587327 ANKRD24Q8TF21 1146 aa20.39■□□□□ 0.85
PRKCSH-205ENST00000587327 RGPD5Q99666 1765 aa20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 ZNF530Q6P9A1 599 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 RAD50Q92878 1312 aa20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 EIF4A1P60842 406 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
PRKCSH-205ENST00000587327 RRP9O43818 475 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-205ENST00000587327 HOXB7P09629 217 aa20.37■□□□□ 0.85
PRKCSH-205ENST00000587327 KIAA1211Q6ZU35 1233 aa20.37■□□□□ 0.85
PRKCSH-205ENST00000587327 SYAP1Q96A49 352 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-205ENST00000587327 DCCP43146 1447 aa20.37■□□□□ 0.85
PRKCSH-205ENST00000587327 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 BEND3Q5T5X7 828 aa20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 DNAJC5Q9H3Z4 198 aa20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 ZNF500O60304 480 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 CNTROBQ8N137 903 aa20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 CHMP4AQ9BY43 222 aa20.36■□□□□ 0.85
PRKCSH-205ENST00000587327 PI4KAP2A4QPH2 592 aa20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 HSP90AA2PQ14568 343 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 PI4KAP1Q8N8J0 262 aa20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 LSG1Q9H089 658 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 SNX14Q9Y5W7 946 aa20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 AMOTQ4VCS5 1084 aa20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 HSP90AB4PQ58FF6 505 aa20.35■□□□□ 0.85
PRKCSH-205ENST00000587327 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 251.6 ms