RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 MRC1P22897 1456 aa22.22■■□□□ 1.15
NPC1-205ENST00000587163 HTRA3P83110 453 aa22.21■■□□□ 1.15
NPC1-205ENST00000587163 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
NPC1-205ENST00000587163 BCL2L12Q9HB09 334 aa22.21■■□□□ 1.15
NPC1-205ENST00000587163 NARFQ9UHQ1 456 aa22.21■■□□□ 1.15
NPC1-205ENST00000587163 ZBTB1Q9Y2K1 713 aa22.21■■□□□ 1.15
NPC1-205ENST00000587163 AFDNP55196 1824 aaKnown RBP22.2■■□□□ 1.14
NPC1-205ENST00000587163 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
NPC1-205ENST00000587163 C16orf71Q8IYS4 520 aaPredicted RBP22.2■■□□□ 1.14
NPC1-205ENST00000587163 RRAGCQ9HB90 399 aa22.2■■□□□ 1.14
NPC1-205ENST00000587163 KDM2BQ8NHM5 1336 aa22.19■■□□□ 1.14
NPC1-205ENST00000587163 COL15A1P39059 1388 aa22.19■■□□□ 1.14
NPC1-205ENST00000587163 WDR90Q96KV7 1748 aa22.18■■□□□ 1.14
NPC1-205ENST00000587163 RASSF7Q02833 373 aa22.18■■□□□ 1.14
NPC1-205ENST00000587163 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
NPC1-205ENST00000587163 KIF7Q2M1P5 1343 aa22.17■■□□□ 1.14
NPC1-205ENST00000587163 PER1O15534 1290 aaPredicted RBP22.16■■□□□ 1.14
NPC1-205ENST00000587163 SERPINB2P05120 415 aa22.16■■□□□ 1.14
NPC1-205ENST00000587163 PRELPP51888 382 aa22.16■■□□□ 1.14
NPC1-205ENST00000587163 FSTL1Q12841 308 aa22.16■■□□□ 1.14
NPC1-205ENST00000587163 VSIG10Q8N0Z9 540 aa22.16■■□□□ 1.14
NPC1-205ENST00000587163 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
NPC1-205ENST00000587163 CANXP27824 592 aaKnown RBP22.15■■□□□ 1.14
NPC1-205ENST00000587163 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
NPC1-205ENST00000587163 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
NPC1-205ENST00000587163 CARMIL3Q8ND23 1372 aa22.12■■□□□ 1.13
NPC1-205ENST00000587163 UBR2Q8IWV8 1755 aa22.12■■□□□ 1.13
NPC1-205ENST00000587163 TNRC6CQ9HCJ0 1690 aaKnown RBP22.12■■□□□ 1.13
NPC1-205ENST00000587163 C2CD5Q86YS7 1000 aa22.12■■□□□ 1.13
NPC1-205ENST00000587163 TTLL6Q8N841 843 aa22.12■■□□□ 1.13
NPC1-205ENST00000587163 KLRG1Q96E93 195 aa22.12■■□□□ 1.13
NPC1-205ENST00000587163 DLEC1Q9Y238 1755 aa22.12■■□□□ 1.13
NPC1-205ENST00000587163 EIF5P55010 431 aaKnown RBP22.11■■□□□ 1.13
NPC1-205ENST00000587163 BICDL1Q6ZP65 573 aa22.11■■□□□ 1.13
NPC1-205ENST00000587163 LMNB1P20700 586 aa22.1■■□□□ 1.13
NPC1-205ENST00000587163 IL17REQ8NFR9 667 aa22.1■■□□□ 1.13
NPC1-205ENST00000587163 ZNF496Q96IT1 587 aaPredicted RBP22.1■■□□□ 1.13
NPC1-205ENST00000587163 STARD3NLO95772 234 aa22.09■■□□□ 1.13
NPC1-205ENST00000587163 JMYQ8N9B5 988 aa22.09■■□□□ 1.13
NPC1-205ENST00000587163 ZC3H4Q9UPT8 1303 aaKnown RBP22.08■■□□□ 1.13
NPC1-205ENST00000587163 GLTPD2A6NH11 291 aa22.08■■□□□ 1.13
NPC1-205ENST00000587163 H0YIN7 160 aa22.08■■□□□ 1.13
NPC1-205ENST00000587163 NFKBIEO00221 500 aa22.08■■□□□ 1.13
NPC1-205ENST00000587163 TBC1D9BQ66K14 1250 aa22.08■■□□□ 1.13
NPC1-205ENST00000587163 TTC5Q8N0Z6 440 aa22.08■■□□□ 1.13
NPC1-205ENST00000587163 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
NPC1-205ENST00000587163 CCDC88AQ3V6T2 1871 aa22.07■■□□□ 1.12
NPC1-205ENST00000587163 CNGB1Q14028 1251 aaPredicted RBP22.06■■□□□ 1.12
NPC1-205ENST00000587163 ZNF790Q6PG37 636 aa22.06■■□□□ 1.12
NPC1-205ENST00000587163 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
NPC1-205ENST00000587163 COL3A1P02461 1466 aaPredicted RBP22.06■■□□□ 1.12
NPC1-205ENST00000587163 HEG1Q9ULI3 1381 aa22.05■■□□□ 1.12
NPC1-205ENST00000587163 A0A087WZG4 1122 aa22.05■■□□□ 1.12
NPC1-205ENST00000587163 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
NPC1-205ENST00000587163 VEGFAP15692 232 aaPredicted RBP22.05■■□□□ 1.12
NPC1-205ENST00000587163 TBC1D2BQ9UPU7 963 aa22.05■■□□□ 1.12
NPC1-205ENST00000587163 ANKRD31Q8N7Z5 1873 aa22.05■■□□□ 1.12
NPC1-205ENST00000587163 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
NPC1-205ENST00000587163 TEFQ10587 303 aa22.04■■□□□ 1.12
NPC1-205ENST00000587163 POTECB2RU33 542 aa22.03■■□□□ 1.12
NPC1-205ENST00000587163 COL13A1Q5TAT6 717 aaPredicted RBP22.03■■□□□ 1.12
NPC1-205ENST00000587163 ZNF622Q969S3 477 aaKnown RBP eCLIP22.03■■□□□ 1.12
NPC1-205ENST00000587163 BRIP1Q9BX63 1249 aa22.03■■□□□ 1.12
NPC1-205ENST00000587163 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
NPC1-205ENST00000587163 ZNF330Q9Y3S2 320 aaPredicted RBP22.03■■□□□ 1.12
NPC1-205ENST00000587163 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
NPC1-205ENST00000587163 SIPA1L3O60292 1781 aaPredicted RBP22.02■■□□□ 1.12
NPC1-205ENST00000587163 A1BGP04217 495 aa22.02■■□□□ 1.12
NPC1-205ENST00000587163 PRR5LQ6MZQ0 368 aa22.02■■□□□ 1.12
NPC1-205ENST00000587163 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
NPC1-205ENST00000587163 KCNQ3O43525 872 aa22.01■■□□□ 1.11
NPC1-205ENST00000587163 C21orf2O43822 256 aa22.01■■□□□ 1.11
NPC1-205ENST00000587163 GAS2L2Q8NHY3 880 aa22.01■■□□□ 1.11
NPC1-205ENST00000587163 SCN7AQ01118 1682 aa22.01■■□□□ 1.11
NPC1-205ENST00000587163 PDE6BP35913 854 aa22■■□□□ 1.11
NPC1-205ENST00000587163 IL6STP40189 918 aaPredicted RBP22■■□□□ 1.11
NPC1-205ENST00000587163 PHACTR3Q96KR7 559 aa22■■□□□ 1.11
NPC1-205ENST00000587163 PCNTO95613 3336 aa22■■□□□ 1.11
NPC1-205ENST00000587163 CAMTA2O94983 1202 aa21.99■■□□□ 1.11
NPC1-205ENST00000587163 FMNL2Q96PY5 1086 aa21.99■■□□□ 1.11
NPC1-205ENST00000587163 COL11A2P13942 1736 aaPredicted RBP21.99■■□□□ 1.11
NPC1-205ENST00000587163 NPC1L1Q9UHC9 1359 aa21.99■■□□□ 1.11
NPC1-205ENST00000587163 PDZRN3Q9UPQ7 1066 aa21.98■■□□□ 1.11
NPC1-205ENST00000587163 CEMIPQ8WUJ3 1361 aa21.98■■□□□ 1.11
NPC1-205ENST00000587163 FER1L6Q2WGJ9 1857 aa21.96■■□□□ 1.11
NPC1-205ENST00000587163 ERFEQ4G0M1 354 aa21.96■■□□□ 1.11
NPC1-205ENST00000587163 DPY19L2Q6NUT2 758 aa21.96■■□□□ 1.11
NPC1-205ENST00000587163 SETDB2Q96T68 719 aa21.96■■□□□ 1.11
NPC1-205ENST00000587163 USP16Q9Y5T5 823 aa21.96■■□□□ 1.11
NPC1-205ENST00000587163 BTBD11A6QL63 1104 aa21.95■■□□□ 1.1
NPC1-205ENST00000587163 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.1
NPC1-205ENST00000587163 CNBD1Q8NA66 436 aa21.95■■□□□ 1.1
NPC1-205ENST00000587163 DICER1Q9UPY3 1922 aaKnown RBP21.94■■□□□ 1.1
NPC1-205ENST00000587163 PRAMEF22A3QJZ6 481 aa21.94■■□□□ 1.1
NPC1-205ENST00000587163 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
NPC1-205ENST00000587163 RSPH6AQ9H0K4 717 aa21.94■■□□□ 1.1
NPC1-205ENST00000587163 SLX4Q8IY92 1834 aa21.94■■□□□ 1.1
NPC1-205ENST00000587163 SRGNP10124 158 aa21.93■■□□□ 1.1
NPC1-205ENST00000587163 DZIP3Q86Y13 1208 aaKnown RBP21.93■■□□□ 1.1
NPC1-205ENST00000587163 LTBP3Q9NS15 1303 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms