RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 IL17REQ8NFR9 667 aa27.13■■□□□ 1.93
CLPTM1-204ENST00000585961 BCL2L12Q9HB09 334 aa27.13■■□□□ 1.93
CLPTM1-204ENST00000585961 RNF181Q9P0P0 153 aa27.13■■□□□ 1.93
CLPTM1-204ENST00000585961 SCN11AQ9UI33 1791 aa27.12■■□□□ 1.93
CLPTM1-204ENST00000585961 SERPINB2P05120 415 aa27.12■■□□□ 1.93
CLPTM1-204ENST00000585961 TJP1Q07157 1748 aa27.11■■□□□ 1.93
CLPTM1-204ENST00000585961 TTC5Q8N0Z6 440 aa27.11■■□□□ 1.93
CLPTM1-204ENST00000585961 VSIG10Q8N0Z9 540 aa27.1■■□□□ 1.93
CLPTM1-204ENST00000585961 STARD3NLO95772 234 aa27.09■■□□□ 1.93
CLPTM1-204ENST00000585961 ZNF496Q96IT1 587 aaPredicted RBP27.09■■□□□ 1.93
CLPTM1-204ENST00000585961 RRAGCQ9HB90 399 aa27.09■■□□□ 1.93
CLPTM1-204ENST00000585961 ZNF330Q9Y3S2 320 aaPredicted RBP27.09■■□□□ 1.93
CLPTM1-204ENST00000585961 COL15A1P39059 1388 aa27.09■■□□□ 1.93
CLPTM1-204ENST00000585961 GNAT3A8MTJ3 354 aa27.08■■□□□ 1.93
CLPTM1-204ENST00000585961 TEFQ10587 303 aa27.08■■□□□ 1.93
CLPTM1-204ENST00000585961 C16orf71Q8IYS4 520 aaPredicted RBP27.08■■□□□ 1.93
CLPTM1-204ENST00000585961 RASSF7Q02833 373 aa27.06■■□□□ 1.92
CLPTM1-204ENST00000585961 IFFO2Q5TF58 517 aa27.06■■□□□ 1.92
CLPTM1-204ENST00000585961 TBC1D2BQ9UPU7 963 aa27.06■■□□□ 1.92
CLPTM1-204ENST00000585961 KCPQ6ZWJ8 1503 aa27.06■■□□□ 1.92
CLPTM1-204ENST00000585961 APLP1P51693 650 aa27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 EIF5P55010 431 aaKnown RBP27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 ZNF790Q6PG37 636 aa27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 C2CD5Q86YS7 1000 aa27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 CCDC24Q8N4L8 307 aa27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 GAS2L2Q8NHY3 880 aa27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 PHACTR3Q96KR7 559 aa27.05■■□□□ 1.92
CLPTM1-204ENST00000585961 KCNQ3O43525 872 aa27.04■■□□□ 1.92
CLPTM1-204ENST00000585961 A1BGP04217 495 aa27.03■■□□□ 1.92
CLPTM1-204ENST00000585961 TBC1D9BQ66K14 1250 aa27.03■■□□□ 1.92
CLPTM1-204ENST00000585961 MRC1P22897 1456 aa27.02■■□□□ 1.92
CLPTM1-204ENST00000585961 H0YIN7 160 aa27.02■■□□□ 1.92
CLPTM1-204ENST00000585961 HTRA3P83110 453 aa27.02■■□□□ 1.92
CLPTM1-204ENST00000585961 TTLL6Q8N841 843 aa27.02■■□□□ 1.92
CLPTM1-204ENST00000585961 ADAMTS7Q9UKP4 1686 aa27.01■■□□□ 1.92
CLPTM1-204ENST00000585961 KDM2BQ8NHM5 1336 aa27.01■■□□□ 1.91
CLPTM1-204ENST00000585961 A0A087WZG4 1122 aa27.01■■□□□ 1.91
CLPTM1-204ENST00000585961 DNAJC5GQ8N7S2 189 aa27.01■■□□□ 1.91
CLPTM1-204ENST00000585961 ZNF219Q9P2Y4 722 aaPredicted RBP27.01■■□□□ 1.91
CLPTM1-204ENST00000585961 PRKAR2BP31323 418 aa27■■□□□ 1.91
CLPTM1-204ENST00000585961 PRELPP51888 382 aa27■■□□□ 1.91
CLPTM1-204ENST00000585961 RBM46Q8TBY0 533 aaKnown RBP27■■□□□ 1.91
CLPTM1-204ENST00000585961 ZNF622Q969S3 477 aaKnown RBP eCLIP27■■□□□ 1.916e-11■■■■□ 24.3
CLPTM1-204ENST00000585961 TEX13AQ9BXU3 409 aaPredicted RBP27■■□□□ 1.91
CLPTM1-204ENST00000585961 BRCA1P38398 1863 aaKnown RBP27■■□□□ 1.91
CLPTM1-204ENST00000585961 HEG1Q9ULI3 1381 aa26.98■■□□□ 1.91
CLPTM1-204ENST00000585961 BTBD11A6QL63 1104 aa26.98■■□□□ 1.91
CLPTM1-204ENST00000585961 FMNL2Q96PY5 1086 aa26.98■■□□□ 1.91
CLPTM1-204ENST00000585961 PIP4K2AP48426 406 aaPredicted RBP26.97■■□□□ 1.91
CLPTM1-204ENST00000585961 CARMIL3Q8ND23 1372 aa26.97■■□□□ 1.91
CLPTM1-204ENST00000585961 NPC1L1Q9UHC9 1359 aa26.97■■□□□ 1.91
CLPTM1-204ENST00000585961 COL3A1P02461 1466 aaPredicted RBP26.96■■□□□ 1.91
CLPTM1-204ENST00000585961 CFAP53Q96M91 514 aa26.96■■□□□ 1.91
CLPTM1-204ENST00000585961 LMNB1P20700 586 aa26.95■■□□□ 1.9
CLPTM1-204ENST00000585961 NPM2Q86SE8 214 aaKnown RBP26.95■■□□□ 1.9
CLPTM1-204ENST00000585961 RSPH6AQ9H0K4 717 aa26.95■■□□□ 1.9
CLPTM1-204ENST00000585961 USP16Q9Y5T5 823 aa26.95■■□□□ 1.9
CLPTM1-204ENST00000585961 ARFGEF1Q9Y6D6 1849 aa26.95■■□□□ 1.9
CLPTM1-204ENST00000585961 U2AF1L5P0DN76 240 aaPredicted RBP26.94■■□□□ 1.9
CLPTM1-204ENST00000585961 U2AF1Q01081 240 aaKnown RBP eCLIP26.94■■□□□ 1.9
CLPTM1-204ENST00000585961 PRAMEF22A3QJZ6 481 aa26.93■■□□□ 1.9
CLPTM1-204ENST00000585961 IL6STP40189 918 aaPredicted RBP26.93■■□□□ 1.9
CLPTM1-204ENST00000585961 MCM10Q7L590 875 aa26.93■■□□□ 1.9
CLPTM1-204ENST00000585961 NUDCQ9Y266 331 aa26.93■■□□□ 1.9
CLPTM1-204ENST00000585961 NPHP1O15259 732 aa26.92■■□□□ 1.9
CLPTM1-204ENST00000585961 C21orf2O43822 256 aa26.92■■□□□ 1.9
CLPTM1-204ENST00000585961 FSTL1Q12841 308 aa26.92■■□□□ 1.9
CLPTM1-204ENST00000585961 PRR5LQ6MZQ0 368 aa26.92■■□□□ 1.9
CLPTM1-204ENST00000585961 SETDB2Q96T68 719 aa26.92■■□□□ 1.9
CLPTM1-204ENST00000585961 BRIP1Q9BX63 1249 aa26.92■■□□□ 1.9
CLPTM1-204ENST00000585961 AFDNP55196 1824 aaKnown RBP26.91■■□□□ 1.9
CLPTM1-204ENST00000585961 VIRMAQ69YN4 1812 aaKnown RBP26.91■■□□□ 1.9
CLPTM1-204ENST00000585961 DCTN1Q14203 1278 aa26.91■■□□□ 1.9
CLPTM1-204ENST00000585961 NFKBIEO00221 500 aa26.9■■□□□ 1.9
CLPTM1-204ENST00000585961 CAMTA2O94983 1202 aa26.9■■□□□ 1.9
CLPTM1-204ENST00000585961 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
CLPTM1-204ENST00000585961 PDE6BP35913 854 aa26.9■■□□□ 1.9
CLPTM1-204ENST00000585961 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
CLPTM1-204ENST00000585961 DZIP3Q86Y13 1208 aaKnown RBP26.89■■□□□ 1.9
CLPTM1-204ENST00000585961 RTF1Q92541 710 aaKnown RBP26.89■■□□□ 1.9
CLPTM1-204ENST00000585961 CEMIPQ8WUJ3 1361 aa26.87■■□□□ 1.89
CLPTM1-204ENST00000585961 VEGFAP15692 232 aaPredicted RBP26.87■■□□□ 1.89
CLPTM1-204ENST00000585961 SBF1O95248 1867 aa26.86■■□□□ 1.89
CLPTM1-204ENST00000585961 MIS18AQ9NYP9 233 aa26.86■■□□□ 1.89
CLPTM1-204ENST00000585961 CNBD1Q8NA66 436 aa26.85■■□□□ 1.89
CLPTM1-204ENST00000585961 SMC1BQ8NDV3 1235 aa26.85■■□□□ 1.89
CLPTM1-204ENST00000585961 UBR2Q8IWV8 1755 aa26.84■■□□□ 1.89
CLPTM1-204ENST00000585961 NRXN2Q9P2S2 1712 aa26.84■■□□□ 1.89
CLPTM1-204ENST00000585961 SNRPA1P09661 255 aaKnown RBP26.83■■□□□ 1.89
CLPTM1-204ENST00000585961 KLRG1Q96E93 195 aa26.83■■□□□ 1.89
CLPTM1-204ENST00000585961 ST5P78524 1137 aa26.82■■□□□ 1.88
CLPTM1-204ENST00000585961 ERFEQ4G0M1 354 aa26.82■■□□□ 1.88
CLPTM1-204ENST00000585961 PDZRN3Q9UPQ7 1066 aa26.82■■□□□ 1.88
CLPTM1-204ENST00000585961 FAM177BA6PVY3 158 aa26.81■■□□□ 1.88
CLPTM1-204ENST00000585961 POTECB2RU33 542 aa26.81■■□□□ 1.88
CLPTM1-204ENST00000585961 DPY19L2Q6NUT2 758 aa26.81■■□□□ 1.88
CLPTM1-204ENST00000585961 NBPF5PQ86XG9 351 aaPredicted RBP26.8■■□□□ 1.88
CLPTM1-204ENST00000585961 CNKSR1Q969H4 720 aa26.8■■□□□ 1.88
CLPTM1-204ENST00000585961 ZC3H4Q9UPT8 1303 aaKnown RBP26.8■■□□□ 1.88
CLPTM1-204ENST00000585961 NBPF26B4DH59 902 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms