RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 MTHFSP49914 203 aa15.39■□□□□ 0.05
CASC3-208ENST00000583649 MAP2K1Q02750 393 aaPredicted RBP15.39■□□□□ 0.05
CASC3-208ENST00000583649 C2CD5Q86YS7 1000 aa15.39■□□□□ 0.05
CASC3-208ENST00000583649 ABHD8Q96I13 439 aa15.39■□□□□ 0.05
CASC3-208ENST00000583649 TMEM88BA6NKF7 163 aa15.38■□□□□ 0.05
CASC3-208ENST00000583649 LBX1P52954 281 aa15.38■□□□□ 0.05
CASC3-208ENST00000583649 USPL1Q5W0Q7 1092 aa15.38■□□□□ 0.05
CASC3-208ENST00000583649 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
CASC3-208ENST00000583649 BEGAINQ9BUH8 593 aa15.38■□□□□ 0.05
CASC3-208ENST00000583649 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
CASC3-208ENST00000583649 KIF20BQ96Q89 1820 aa15.36■□□□□ 0.05
CASC3-208ENST00000583649 POTECB2RU33 542 aa15.36■□□□□ 0.05
CASC3-208ENST00000583649 SERPINB2P05120 415 aa15.36■□□□□ 0.05
CASC3-208ENST00000583649 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
CASC3-208ENST00000583649 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
CASC3-208ENST00000583649 WBP1LQ9NX94 342 aa15.36■□□□□ 0.05
CASC3-208ENST00000583649 NFKBIEO00221 500 aa15.35■□□□□ 0.05
CASC3-208ENST00000583649 PDE6BP35913 854 aa15.35■□□□□ 0.05
CASC3-208ENST00000583649 VEGFBP49765 207 aa15.35■□□□□ 0.05
CASC3-208ENST00000583649 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.051e-6■□□□□ 11.1
CASC3-208ENST00000583649 TAOK3Q9H2K8 898 aa15.35■□□□□ 0.05
CASC3-208ENST00000583649 NARFQ9UHQ1 456 aa15.35■□□□□ 0.05
CASC3-208ENST00000583649 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
CASC3-208ENST00000583649 CCDC85CA6NKD9 419 aa15.34■□□□□ 0.05
CASC3-208ENST00000583649 NFIXQ14938 502 aa15.34■□□□□ 0.05
CASC3-208ENST00000583649 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
CASC3-208ENST00000583649 NPHP1O15259 732 aa15.33■□□□□ 0.04
CASC3-208ENST00000583649 DEFB115Q30KQ5 88 aa15.33■□□□□ 0.04
CASC3-208ENST00000583649 INTS5Q6P9B9 1019 aaKnown RBP15.33■□□□□ 0.04
CASC3-208ENST00000583649 C21orf2O43822 256 aa15.32■□□□□ 0.04
CASC3-208ENST00000583649 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
CASC3-208ENST00000583649 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
CASC3-208ENST00000583649 PASKQ96RG2 1323 aa15.32■□□□□ 0.04
CASC3-208ENST00000583649 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
CASC3-208ENST00000583649 DDNO94850 711 aaPredicted RBP15.31■□□□□ 0.04
CASC3-208ENST00000583649 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
CASC3-208ENST00000583649 CNKSR1Q969H4 720 aa15.31■□□□□ 0.04
CASC3-208ENST00000583649 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
CASC3-208ENST00000583649 SOS1Q07889 1333 aaPredicted RBP15.31■□□□□ 0.04
CASC3-208ENST00000583649 A0A087WZG4 1122 aa15.3■□□□□ 0.04
CASC3-208ENST00000583649 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
CASC3-208ENST00000583649 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
CASC3-208ENST00000583649 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
CASC3-208ENST00000583649 BRIP1Q9BX63 1249 aa15.3■□□□□ 0.04
CASC3-208ENST00000583649 MYH14Q7Z406 1995 aaKnown RBP15.29■□□□□ 0.04
CASC3-208ENST00000583649 COL15A1P39059 1388 aa15.29■□□□□ 0.04
CASC3-208ENST00000583649 ECE1P42892 770 aa15.29■□□□□ 0.04
CASC3-208ENST00000583649 RGS19P49795 217 aa15.29■□□□□ 0.04
CASC3-208ENST00000583649 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
CASC3-208ENST00000583649 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
CASC3-208ENST00000583649 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
CASC3-208ENST00000583649 ANKRD26Q9UPS8 1709 aa15.29■□□□□ 0.04
CASC3-208ENST00000583649 RASSF10A6NK89 507 aa15.28■□□□□ 0.04
CASC3-208ENST00000583649 DNAJC10Q8IXB1 793 aa15.28■□□□□ 0.04
CASC3-208ENST00000583649 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
CASC3-208ENST00000583649 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
CASC3-208ENST00000583649 CARD14Q9BXL6 1004 aa15.28■□□□□ 0.04
CASC3-208ENST00000583649 DLEC1Q9Y238 1755 aa15.27■□□□□ 0.04
CASC3-208ENST00000583649 WDR33Q9C0J8 1336 aaKnown RBP15.27■□□□□ 0.04
CASC3-208ENST00000583649 STARD3NLO95772 234 aa15.27■□□□□ 0.04
CASC3-208ENST00000583649 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
CASC3-208ENST00000583649 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
CASC3-208ENST00000583649 BICDL1Q6ZP65 573 aa15.27■□□□□ 0.04
CASC3-208ENST00000583649 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
CASC3-208ENST00000583649 CYP19A1P11511 503 aaPredicted RBP15.26■□□□□ 0.03
CASC3-208ENST00000583649 CCDC88AQ3V6T2 1871 aa15.26■□□□□ 0.03
CASC3-208ENST00000583649 ITGBL1O95965 494 aaPredicted RBP15.25■□□□□ 0.03
CASC3-208ENST00000583649 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
CASC3-208ENST00000583649 ST5P78524 1137 aa15.25■□□□□ 0.03
CASC3-208ENST00000583649 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
CASC3-208ENST00000583649 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
CASC3-208ENST00000583649 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
CASC3-208ENST00000583649 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
CASC3-208ENST00000583649 EPHX2P34913 555 aa15.24■□□□□ 0.03
CASC3-208ENST00000583649 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
CASC3-208ENST00000583649 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
CASC3-208ENST00000583649 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
CASC3-208ENST00000583649 SCN4AP35499 1836 aa15.23■□□□□ 0.03
CASC3-208ENST00000583649 CA12O43570 354 aa15.23■□□□□ 0.03
CASC3-208ENST00000583649 MASTLQ96GX5 879 aa15.23■□□□□ 0.03
CASC3-208ENST00000583649 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
CASC3-208ENST00000583649 ZBTB1Q9Y2K1 713 aa15.23■□□□□ 0.03
CASC3-208ENST00000583649 DICER1Q9UPY3 1922 aaKnown RBP15.23■□□□□ 0.03
CASC3-208ENST00000583649 AFDNP55196 1824 aaKnown RBP15.22■□□□□ 0.03
CASC3-208ENST00000583649 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
CASC3-208ENST00000583649 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
CASC3-208ENST00000583649 PRPF40BQ6NWY9 871 aaKnown RBP15.22■□□□□ 0.03
CASC3-208ENST00000583649 CNBD1Q8NA66 436 aa15.22■□□□□ 0.03
CASC3-208ENST00000583649 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
CASC3-208ENST00000583649 TJP1Q07157 1748 aa15.22■□□□□ 0.03
CASC3-208ENST00000583649 TTC5Q8N0Z6 440 aa15.21■□□□□ 0.03
CASC3-208ENST00000583649 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
CASC3-208ENST00000583649 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
CASC3-208ENST00000583649 LMOD1P29536 600 aaPredicted RBP15.2■□□□□ 0.02
CASC3-208ENST00000583649 SULT6B1Q6IMI4 303 aa15.2■□□□□ 0.02
CASC3-208ENST00000583649 PRR5LQ6MZQ0 368 aa15.2■□□□□ 0.02
CASC3-208ENST00000583649 RTKN2Q8IZC4 609 aa15.2■□□□□ 0.02
CASC3-208ENST00000583649 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
CASC3-208ENST00000583649 VIRMAQ69YN4 1812 aaKnown RBP15.2■□□□□ 0.02
CASC3-208ENST00000583649 MAP2K2P36507 400 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms