RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
TOP3A-215ENST00000583328 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
TOP3A-215ENST00000583328 PANK3Q9H999 370 aa16.83■□□□□ 0.28
TOP3A-215ENST00000583328 SERPINB2P05120 415 aa16.82■□□□□ 0.28
TOP3A-215ENST00000583328 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
TOP3A-215ENST00000583328 CYP19A1P11511 503 aaPredicted RBP16.81■□□□□ 0.28
TOP3A-215ENST00000583328 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
TOP3A-215ENST00000583328 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
TOP3A-215ENST00000583328 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
TOP3A-215ENST00000583328 H0YIN7 160 aa16.8■□□□□ 0.28
TOP3A-215ENST00000583328 SLC39A6Q13433 755 aa16.8■□□□□ 0.28
TOP3A-215ENST00000583328 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
TOP3A-215ENST00000583328 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
TOP3A-215ENST00000583328 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
TOP3A-215ENST00000583328 IL13P35225 146 aa16.78■□□□□ 0.28
TOP3A-215ENST00000583328 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
TOP3A-215ENST00000583328 TIMELESSQ9UNS1 1208 aa16.78■□□□□ 0.28
TOP3A-215ENST00000583328 COL15A1P39059 1388 aa16.77■□□□□ 0.28
TOP3A-215ENST00000583328 NFKBIEO00221 500 aa16.77■□□□□ 0.28
TOP3A-215ENST00000583328 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
TOP3A-215ENST00000583328 BICDL1Q6ZP65 573 aa16.77■□□□□ 0.28
TOP3A-215ENST00000583328 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.28
TOP3A-215ENST00000583328 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
TOP3A-215ENST00000583328 POTECB2RU33 542 aa16.76■□□□□ 0.27
TOP3A-215ENST00000583328 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
TOP3A-215ENST00000583328 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
TOP3A-215ENST00000583328 SBF1O95248 1867 aa16.75■□□□□ 0.27
TOP3A-215ENST00000583328 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
TOP3A-215ENST00000583328 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
TOP3A-215ENST00000583328 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
TOP3A-215ENST00000583328 TJP1Q07157 1748 aa16.73■□□□□ 0.27
TOP3A-215ENST00000583328 A0A087WZG4 1122 aa16.73■□□□□ 0.27
TOP3A-215ENST00000583328 C21orf2O43822 256 aa16.73■□□□□ 0.27
TOP3A-215ENST00000583328 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
TOP3A-215ENST00000583328 STARD3NLO95772 234 aa16.72■□□□□ 0.27
TOP3A-215ENST00000583328 HMOX1P09601 288 aa16.72■□□□□ 0.27
TOP3A-215ENST00000583328 PDE6BP35913 854 aa16.72■□□□□ 0.27
TOP3A-215ENST00000583328 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
TOP3A-215ENST00000583328 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
TOP3A-215ENST00000583328 PDZRN3Q9UPQ7 1066 aa16.72■□□□□ 0.27
TOP3A-215ENST00000583328 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
TOP3A-215ENST00000583328 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
TOP3A-215ENST00000583328 TBC1D9BQ66K14 1250 aa16.71■□□□□ 0.27
TOP3A-215ENST00000583328 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.27
TOP3A-215ENST00000583328 BRIP1Q9BX63 1249 aa16.71■□□□□ 0.27
TOP3A-215ENST00000583328 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
TOP3A-215ENST00000583328 ADAMTS7Q9UKP4 1686 aa16.71■□□□□ 0.27
TOP3A-215ENST00000583328 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
TOP3A-215ENST00000583328 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
TOP3A-215ENST00000583328 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
TOP3A-215ENST00000583328 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-215ENST00000583328 NPHP1O15259 732 aa16.68■□□□□ 0.26
TOP3A-215ENST00000583328 DDNO94850 711 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-215ENST00000583328 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
TOP3A-215ENST00000583328 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
TOP3A-215ENST00000583328 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
TOP3A-215ENST00000583328 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
TOP3A-215ENST00000583328 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
TOP3A-215ENST00000583328 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
TOP3A-215ENST00000583328 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
TOP3A-215ENST00000583328 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-215ENST00000583328 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
TOP3A-215ENST00000583328 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
TOP3A-215ENST00000583328 NRXN2Q9P2S2 1712 aa16.66■□□□□ 0.26
TOP3A-215ENST00000583328 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
TOP3A-215ENST00000583328 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
TOP3A-215ENST00000583328 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
TOP3A-215ENST00000583328 FOXN1O15353 648 aa16.65■□□□□ 0.26
TOP3A-215ENST00000583328 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
TOP3A-215ENST00000583328 MRC1P22897 1456 aa16.65■□□□□ 0.26
TOP3A-215ENST00000583328 PCNTO95613 3336 aa16.65■□□□□ 0.26
TOP3A-215ENST00000583328 IQCA1LA6NCM1 817 aa16.64■□□□□ 0.25
TOP3A-215ENST00000583328 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
TOP3A-215ENST00000583328 ST5P78524 1137 aa16.64■□□□□ 0.25
TOP3A-215ENST00000583328 TEFQ10587 303 aa16.64■□□□□ 0.25
TOP3A-215ENST00000583328 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
TOP3A-215ENST00000583328 STYK1Q6J9G0 422 aa16.64■□□□□ 0.25
TOP3A-215ENST00000583328 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
TOP3A-215ENST00000583328 IL6STP40189 918 aaPredicted RBP16.63■□□□□ 0.25
TOP3A-215ENST00000583328 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
TOP3A-215ENST00000583328 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
TOP3A-215ENST00000583328 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
TOP3A-215ENST00000583328 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
TOP3A-215ENST00000583328 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
TOP3A-215ENST00000583328 MASTLQ96GX5 879 aa16.63■□□□□ 0.25
TOP3A-215ENST00000583328 CNTNAP1P78357 1384 aa16.63■□□□□ 0.25
TOP3A-215ENST00000583328 A1BGP04217 495 aa16.62■□□□□ 0.25
TOP3A-215ENST00000583328 SRGNP10124 158 aa16.62■□□□□ 0.25
TOP3A-215ENST00000583328 PRDM10Q9NQV6 1147 aa16.62■□□□□ 0.25
TOP3A-215ENST00000583328 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
TOP3A-215ENST00000583328 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
TOP3A-215ENST00000583328 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
TOP3A-215ENST00000583328 CTCFP49711 727 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-215ENST00000583328 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
TOP3A-215ENST00000583328 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-215ENST00000583328 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-215ENST00000583328 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
TOP3A-215ENST00000583328 TMEM88BA6NKF7 163 aa16.6■□□□□ 0.25
TOP3A-215ENST00000583328 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
TOP3A-215ENST00000583328 VEGFBP49765 207 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms