RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
SENP3-208ENST00000583277 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.57
SENP3-208ENST00000583277 ABCC4O15439 1325 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 BTAF1O14981 1849 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 RGS12O14924 1447 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
SENP3-208ENST00000583277 RLBP1P12271 317 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 FLIIQ13045 1269 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
SENP3-208ENST00000583277 PPP4R2Q9NY27 417 aa18.63■□□□□ 0.57
SENP3-208ENST00000583277 AAMPQ13685 434 aa18.62■□□□□ 0.57
SENP3-208ENST00000583277 MVPQ14764 893 aaKnown RBP18.62■□□□□ 0.57
SENP3-208ENST00000583277 SMARCC1Q92922 1105 aaPredicted RBP18.62■□□□□ 0.57
SENP3-208ENST00000583277 DDX21Q9NR30 783 aaKnown RBP eCLIP18.62■□□□□ 0.57
SENP3-208ENST00000583277 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
SENP3-208ENST00000583277 PXDNLA1KZ92 1463 aa18.61■□□□□ 0.57
SENP3-208ENST00000583277 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
SENP3-208ENST00000583277 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
SENP3-208ENST00000583277 TJP1Q07157 1748 aa18.61■□□□□ 0.57
SENP3-208ENST00000583277 RXRBP28702 533 aa18.6■□□□□ 0.57
SENP3-208ENST00000583277 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
SENP3-208ENST00000583277 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
SENP3-208ENST00000583277 G2E3Q7L622 706 aa18.59■□□□□ 0.57
SENP3-208ENST00000583277 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
SENP3-208ENST00000583277 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
SENP3-208ENST00000583277 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
SENP3-208ENST00000583277 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
SENP3-208ENST00000583277 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
SENP3-208ENST00000583277 CHMP4BQ9H444 224 aaKnown RBP18.59■□□□□ 0.57
SENP3-208ENST00000583277 KCNQ2O43526 872 aa18.58■□□□□ 0.56
SENP3-208ENST00000583277 STARD3NLO95772 234 aa18.58■□□□□ 0.56
SENP3-208ENST00000583277 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.56
SENP3-208ENST00000583277 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.56
SENP3-208ENST00000583277 PDIA6Q15084 440 aa18.57■□□□□ 0.56
SENP3-208ENST00000583277 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
SENP3-208ENST00000583277 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
SENP3-208ENST00000583277 PHAXQ9H814 394 aaKnown RBP18.56■□□□□ 0.56
SENP3-208ENST00000583277 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
SENP3-208ENST00000583277 DDX58O95786 925 aaKnown RBP18.55■□□□□ 0.56
SENP3-208ENST00000583277 COL5A3P25940 1745 aaPredicted RBP18.55■□□□□ 0.56
SENP3-208ENST00000583277 LOC102724428A0A0B4J2F2 783 aa18.55■□□□□ 0.56
SENP3-208ENST00000583277 ANXA1P04083 346 aa18.55■□□□□ 0.56
SENP3-208ENST00000583277 CCT4P50991 539 aaKnown RBP18.55■□□□□ 0.56
SENP3-208ENST00000583277 SIK1P57059 783 aa18.55■□□□□ 0.56
SENP3-208ENST00000583277 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
SENP3-208ENST00000583277 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
SENP3-208ENST00000583277 EP400Q96L91 3159 aa18.54■□□□□ 0.56
SENP3-208ENST00000583277 LY75O60449 1722 aa18.54■□□□□ 0.56
SENP3-208ENST00000583277 RREB1Q92766 1687 aa18.54■□□□□ 0.56
SENP3-208ENST00000583277 MYL6BP14649 208 aa18.53■□□□□ 0.56
SENP3-208ENST00000583277 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
SENP3-208ENST00000583277 SLC4A9Q96Q91 983 aa18.53■□□□□ 0.56
SENP3-208ENST00000583277 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
SENP3-208ENST00000583277 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
SENP3-208ENST00000583277 ATP10DQ9P241 1426 aa18.52■□□□□ 0.56
SENP3-208ENST00000583277 ADCY9O60503 1353 aa18.52■□□□□ 0.56
SENP3-208ENST00000583277 ARFGEF2Q9Y6D5 1785 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 F6X3S4 739 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 CYP19A1P11511 503 aaPredicted RBP18.51■□□□□ 0.55
SENP3-208ENST00000583277 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 POTEAQ6S8J7 498 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 KSR2Q6VAB6 950 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 DNAAF4Q8WXU2 420 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 PI4KAP2A4QPH2 592 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 A1BGP04217 495 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 NBPF14Q5TI25 921 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
SENP3-208ENST00000583277 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 PI4KAP1Q8N8J0 262 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
SENP3-208ENST00000583277 NUP188Q5SRE5 1749 aa18.5■□□□□ 0.55
SENP3-208ENST00000583277 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
SENP3-208ENST00000583277 AIMP1Q12904 312 aaKnown RBP18.49■□□□□ 0.55
SENP3-208ENST00000583277 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
SENP3-208ENST00000583277 PIP4K2AP48426 406 aaPredicted RBP18.48■□□□□ 0.55
SENP3-208ENST00000583277 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
SENP3-208ENST00000583277 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
SENP3-208ENST00000583277 MAP3K2Q9Y2U5 619 aa18.48■□□□□ 0.55
SENP3-208ENST00000583277 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
SENP3-208ENST00000583277 ZBTB7BO15156 539 aaPredicted RBP18.47■□□□□ 0.55
SENP3-208ENST00000583277 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 IBTKQ9P2D0 1353 aaPredicted RBP18.47■□□□□ 0.55
SENP3-208ENST00000583277 ITPK1Q13572 414 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 ANKRD13DQ6ZTN6 518 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 ILDR2Q71H61 639 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 CCDC87Q9NVE4 849 aa18.47■□□□□ 0.55
SENP3-208ENST00000583277 MYH14Q7Z406 1995 aaKnown RBP18.46■□□□□ 0.55
SENP3-208ENST00000583277 SOCS7O14512 581 aa18.46■□□□□ 0.55
SENP3-208ENST00000583277 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.55
SENP3-208ENST00000583277 AFDNP55196 1824 aaKnown RBP18.45■□□□□ 0.54
SENP3-208ENST00000583277 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
SENP3-208ENST00000583277 NEXNQ0ZGT2 675 aa18.45■□□□□ 0.54
SENP3-208ENST00000583277 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
SENP3-208ENST00000583277 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms