RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 C9orf78Q9NZ63 289 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-205ENST00000582730 MED1Q15648 1581 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-205ENST00000582730 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
SRSF1-205ENST00000582730 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
SRSF1-205ENST00000582730 TATP17735 454 aaPredicted RBP16.74■□□□□ 0.27
SRSF1-205ENST00000582730 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
SRSF1-205ENST00000582730 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
SRSF1-205ENST00000582730 PHRF1Q9P1Y6 1649 aaKnown RBP16.73■□□□□ 0.27
SRSF1-205ENST00000582730 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
SRSF1-205ENST00000582730 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
SRSF1-205ENST00000582730 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
SRSF1-205ENST00000582730 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
SRSF1-205ENST00000582730 ADCY9O60503 1353 aa16.73■□□□□ 0.27
SRSF1-205ENST00000582730 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
SRSF1-205ENST00000582730 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-205ENST00000582730 MST1RQ04912 1400 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 KIF1AQ12756 1690 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 MYL6BP14649 208 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 TNPO1Q92973 898 aaKnown RBP16.72■□□□□ 0.27
SRSF1-205ENST00000582730 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
SRSF1-205ENST00000582730 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
SRSF1-205ENST00000582730 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
SRSF1-205ENST00000582730 SALL3Q9BXA9 1300 aa16.71■□□□□ 0.27
SRSF1-205ENST00000582730 CLCN1P35523 988 aa16.7■□□□□ 0.26
SRSF1-205ENST00000582730 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
SRSF1-205ENST00000582730 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
SRSF1-205ENST00000582730 ST18O60284 1047 aa16.7■□□□□ 0.26
SRSF1-205ENST00000582730 KSR2Q6VAB6 950 aa16.7■□□□□ 0.26
SRSF1-205ENST00000582730 DDIT3P35638 169 aa16.7■□□□□ 0.26
SRSF1-205ENST00000582730 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-205ENST00000582730 TRAK2O60296 914 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 RAB11FIP3O75154 756 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 ZNF790Q6PG37 636 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 POLA2Q14181 598 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
SRSF1-205ENST00000582730 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
SRSF1-205ENST00000582730 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
SRSF1-205ENST00000582730 GBP4Q96PP9 640 aa16.68■□□□□ 0.26
SRSF1-205ENST00000582730 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
SRSF1-205ENST00000582730 PHKG2P15735 406 aa16.68■□□□□ 0.26
SRSF1-205ENST00000582730 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
SRSF1-205ENST00000582730 SLC52A2Q9HAB3 445 aa16.68■□□□□ 0.26
SRSF1-205ENST00000582730 CHMLP26374 656 aa16.68■□□□□ 0.26
SRSF1-205ENST00000582730 SSFA2P28290 1259 aa16.67■□□□□ 0.26
SRSF1-205ENST00000582730 RAB3GAP1Q15042 981 aa16.67■□□□□ 0.26
SRSF1-205ENST00000582730 IFNL2Q8IZJ0 200 aa16.67■□□□□ 0.26
SRSF1-205ENST00000582730 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
SRSF1-205ENST00000582730 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
SRSF1-205ENST00000582730 MCCP23508 829 aa16.67■□□□□ 0.26
SRSF1-205ENST00000582730 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
SRSF1-205ENST00000582730 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
SRSF1-205ENST00000582730 PA2G4Q9UQ80 394 aaKnown RBP16.67■□□□□ 0.26
SRSF1-205ENST00000582730 MEGF6O75095 1541 aa16.66■□□□□ 0.26
SRSF1-205ENST00000582730 NEK4P51957 841 aa16.66■□□□□ 0.26
SRSF1-205ENST00000582730 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
SRSF1-205ENST00000582730 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
SRSF1-205ENST00000582730 GLIPR1L2Q4G1C9 344 aa16.65■□□□□ 0.26
SRSF1-205ENST00000582730 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
SRSF1-205ENST00000582730 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-205ENST00000582730 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
SRSF1-205ENST00000582730 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-205ENST00000582730 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
SRSF1-205ENST00000582730 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-205ENST00000582730 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
SRSF1-205ENST00000582730 LINS1Q8NG48 757 aa16.64■□□□□ 0.25
SRSF1-205ENST00000582730 XAGE3Q8WTP9 111 aa16.64■□□□□ 0.25
SRSF1-205ENST00000582730 GRM8O00222 908 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 MRE11P49959 708 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 PALD1Q9ULE6 856 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 SPATA31A3Q5VYP0 1347 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 CYP27B1O15528 508 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 CABP4P57796 275 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
SRSF1-205ENST00000582730 AOX1Q06278 1338 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 PDIA6Q15084 440 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
SRSF1-205ENST00000582730 PKNOX2Q96KN3 472 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 SIL1Q9H173 461 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 HSP90AA2PQ14568 343 aaPredicted RBP16.62■□□□□ 0.25
SRSF1-205ENST00000582730 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 PI4K2BQ8TCG2 481 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
SRSF1-205ENST00000582730 MYD88Q99836 296 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
SRSF1-205ENST00000582730 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 DCCP43146 1447 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
SRSF1-205ENST00000582730 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms