RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-218ENST00000581655 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
CSNK1D-218ENST00000581655 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
CSNK1D-218ENST00000581655 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
CSNK1D-218ENST00000581655 MTHFSP49914 203 aa17.42■□□□□ 0.38
CSNK1D-218ENST00000581655 NFIXQ14938 502 aa17.42■□□□□ 0.38
CSNK1D-218ENST00000581655 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
CSNK1D-218ENST00000581655 PRDM10Q9NQV6 1147 aa17.42■□□□□ 0.38
CSNK1D-218ENST00000581655 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
CSNK1D-218ENST00000581655 CHADLQ6NUI6 762 aa17.41■□□□□ 0.38
CSNK1D-218ENST00000581655 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-218ENST00000581655 C2CD5Q86YS7 1000 aa17.4■□□□□ 0.38
CSNK1D-218ENST00000581655 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 SERPINB2P05120 415 aa17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 DNAJC10Q8IXB1 793 aa17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
CSNK1D-218ENST00000581655 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
CSNK1D-218ENST00000581655 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
CSNK1D-218ENST00000581655 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
CSNK1D-218ENST00000581655 H0YIN7 160 aa17.37■□□□□ 0.37
CSNK1D-218ENST00000581655 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-218ENST00000581655 ERFEQ4G0M1 354 aa17.37■□□□□ 0.37
CSNK1D-218ENST00000581655 NARFQ9UHQ1 456 aa17.37■□□□□ 0.37
CSNK1D-218ENST00000581655 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
CSNK1D-218ENST00000581655 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-218ENST00000581655 COL15A1P39059 1388 aa17.36■□□□□ 0.37
CSNK1D-218ENST00000581655 FER1L6Q2WGJ9 1857 aa17.35■□□□□ 0.37
CSNK1D-218ENST00000581655 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
CSNK1D-218ENST00000581655 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
CSNK1D-218ENST00000581655 C21orf2O43822 256 aa17.34■□□□□ 0.37
CSNK1D-218ENST00000581655 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-218ENST00000581655 CYP19A1P11511 503 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-218ENST00000581655 LBX1P52954 281 aa17.34■□□□□ 0.37
CSNK1D-218ENST00000581655 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
CSNK1D-218ENST00000581655 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
CSNK1D-218ENST00000581655 VEGFBP49765 207 aa17.33■□□□□ 0.36
CSNK1D-218ENST00000581655 BICDL1Q6ZP65 573 aa17.33■□□□□ 0.36
CSNK1D-218ENST00000581655 ZNF622Q969S3 477 aaKnown RBP eCLIP17.33■□□□□ 0.36
CSNK1D-218ENST00000581655 ANKRD31Q8N7Z5 1873 aa17.33■□□□□ 0.36
CSNK1D-218ENST00000581655 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
CSNK1D-218ENST00000581655 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
CSNK1D-218ENST00000581655 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-218ENST00000581655 ABHD8Q96I13 439 aa17.31■□□□□ 0.36
CSNK1D-218ENST00000581655 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
CSNK1D-218ENST00000581655 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
CSNK1D-218ENST00000581655 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
CSNK1D-218ENST00000581655 TAOK3Q9H2K8 898 aa17.3■□□□□ 0.36
CSNK1D-218ENST00000581655 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
CSNK1D-218ENST00000581655 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-218ENST00000581655 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
CSNK1D-218ENST00000581655 CCDC24Q8N4L8 307 aa17.29■□□□□ 0.36
CSNK1D-218ENST00000581655 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
CSNK1D-218ENST00000581655 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-218ENST00000581655 SULT6B1Q6IMI4 303 aa17.28■□□□□ 0.36
CSNK1D-218ENST00000581655 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-218ENST00000581655 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
CSNK1D-218ENST00000581655 SCN4AP35499 1836 aa17.28■□□□□ 0.36
CSNK1D-218ENST00000581655 SLX4Q8IY92 1834 aa17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 PDE6BP35913 854 aa17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 BRIP1Q9BX63 1249 aa17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 LGR6Q9HBX8 967 aa17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
CSNK1D-218ENST00000581655 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-218ENST00000581655 AKAP4Q5JQC9 854 aa17.26■□□□□ 0.35
CSNK1D-218ENST00000581655 EAPPQ56P03 285 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-218ENST00000581655 PRR5LQ6MZQ0 368 aa17.25■□□□□ 0.35
CSNK1D-218ENST00000581655 L3MBTL3Q96JM7 780 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-218ENST00000581655 POLR3GLQ9BT43 218 aa17.25■□□□□ 0.35
CSNK1D-218ENST00000581655 MRC1P22897 1456 aa17.24■□□□□ 0.35
CSNK1D-218ENST00000581655 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-218ENST00000581655 PCDH10Q9P2E7 1040 aa17.24■□□□□ 0.35
CSNK1D-218ENST00000581655 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 DEFB115Q30KQ5 88 aa17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 CNKSR1Q969H4 720 aa17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
CSNK1D-218ENST00000581655 CCDC85CA6NKD9 419 aa17.22■□□□□ 0.35
CSNK1D-218ENST00000581655 MAP2K1Q02750 393 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-218ENST00000581655 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
CSNK1D-218ENST00000581655 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
CSNK1D-218ENST00000581655 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-218ENST00000581655 ARFGEF2Q9Y6D5 1785 aa17.21■□□□□ 0.35
CSNK1D-218ENST00000581655 A0A087WZG4 1122 aa17.21■□□□□ 0.35
CSNK1D-218ENST00000581655 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
CSNK1D-218ENST00000581655 STYK1Q6J9G0 422 aa17.21■□□□□ 0.35
CSNK1D-218ENST00000581655 ADAMTSL1Q8N6G6 1762 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 NPHP1O15259 732 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 STARD3NLO95772 234 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 SRGNP10124 158 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 TBC1D2BQ9UPU7 963 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms