RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 CAPN15O75808 1086 aa13.54□□□□□ -0.24
RFFL-208ENST00000581039 SERPINB2P05120 415 aa13.54□□□□□ -0.24
RFFL-208ENST00000581039 IL13P35225 146 aa13.54□□□□□ -0.24
RFFL-208ENST00000581039 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
RFFL-208ENST00000581039 TRIM26Q12899 539 aaPredicted RBP13.54□□□□□ -0.24
RFFL-208ENST00000581039 TNS4Q8IZW8 715 aa13.54□□□□□ -0.24
RFFL-208ENST00000581039 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
RFFL-208ENST00000581039 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
RFFL-208ENST00000581039 H0YIN7 160 aa13.53□□□□□ -0.24
RFFL-208ENST00000581039 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
RFFL-208ENST00000581039 C2CD5Q86YS7 1000 aa13.53□□□□□ -0.24
RFFL-208ENST00000581039 KNSTRNQ9Y448 316 aa13.53□□□□□ -0.24
RFFL-208ENST00000581039 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
RFFL-208ENST00000581039 COL15A1P39059 1388 aa13.51□□□□□ -0.25
RFFL-208ENST00000581039 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
RFFL-208ENST00000581039 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
RFFL-208ENST00000581039 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
RFFL-208ENST00000581039 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
RFFL-208ENST00000581039 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
RFFL-208ENST00000581039 PRELPP51888 382 aa13.5□□□□□ -0.25
RFFL-208ENST00000581039 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
RFFL-208ENST00000581039 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
RFFL-208ENST00000581039 TJP1Q07157 1748 aa13.5□□□□□ -0.25
RFFL-208ENST00000581039 SBF1O95248 1867 aa13.49□□□□□ -0.25
RFFL-208ENST00000581039 A0A087WZG4 1122 aa13.49□□□□□ -0.25
RFFL-208ENST00000581039 STARD3NLO95772 234 aa13.49□□□□□ -0.25
RFFL-208ENST00000581039 HMOX1P09601 288 aa13.49□□□□□ -0.25
RFFL-208ENST00000581039 TNRC6CQ9HCJ0 1690 aaKnown RBP13.49□□□□□ -0.25
RFFL-208ENST00000581039 HSPA1AP0DMV8 641 aaKnown RBP13.48□□□□□ -0.25
RFFL-208ENST00000581039 HSPA1BP0DMV9 641 aaKnown RBP13.48□□□□□ -0.25
RFFL-208ENST00000581039 TTC5Q8N0Z6 440 aa13.48□□□□□ -0.25
RFFL-208ENST00000581039 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
RFFL-208ENST00000581039 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
RFFL-208ENST00000581039 NFKBIEO00221 500 aa13.47□□□□□ -0.25
RFFL-208ENST00000581039 PDE6BP35913 854 aa13.47□□□□□ -0.25
RFFL-208ENST00000581039 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
RFFL-208ENST00000581039 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
RFFL-208ENST00000581039 ERFEQ4G0M1 354 aa13.47□□□□□ -0.25
RFFL-208ENST00000581039 BRIP1Q9BX63 1249 aa13.47□□□□□ -0.25
RFFL-208ENST00000581039 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
RFFL-208ENST00000581039 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
RFFL-208ENST00000581039 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
RFFL-208ENST00000581039 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.25
RFFL-208ENST00000581039 POTECB2RU33 542 aa13.46□□□□□ -0.25
RFFL-208ENST00000581039 C21orf2O43822 256 aa13.46□□□□□ -0.25
RFFL-208ENST00000581039 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
RFFL-208ENST00000581039 PCNTO95613 3336 aa13.46□□□□□ -0.25
RFFL-208ENST00000581039 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
RFFL-208ENST00000581039 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
RFFL-208ENST00000581039 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
RFFL-208ENST00000581039 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
RFFL-208ENST00000581039 NPHP1O15259 732 aa13.44□□□□□ -0.26
RFFL-208ENST00000581039 DIAPH1O60610 1272 aaKnown RBP13.44□□□□□ -0.26
RFFL-208ENST00000581039 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
RFFL-208ENST00000581039 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
RFFL-208ENST00000581039 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
RFFL-208ENST00000581039 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
RFFL-208ENST00000581039 MRC1P22897 1456 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 TEFQ10587 303 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
RFFL-208ENST00000581039 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 TAOK3Q9H2K8 898 aa13.43□□□□□ -0.26
RFFL-208ENST00000581039 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
RFFL-208ENST00000581039 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
RFFL-208ENST00000581039 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
RFFL-208ENST00000581039 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
RFFL-208ENST00000581039 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
RFFL-208ENST00000581039 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
RFFL-208ENST00000581039 CNBD1Q8NA66 436 aa13.41□□□□□ -0.26
RFFL-208ENST00000581039 MKRN1Q9UHC7 482 aaKnown RBP13.41□□□□□ -0.26
RFFL-208ENST00000581039 LTBP3Q9NS15 1303 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 GNAT3A8MTJ3 354 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 ST5P78524 1137 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 FMNL2Q96PY5 1086 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
RFFL-208ENST00000581039 IQCA1LA6NCM1 817 aa13.39□□□□□ -0.27
RFFL-208ENST00000581039 A1BGP04217 495 aa13.39□□□□□ -0.27
RFFL-208ENST00000581039 SRGNP10124 158 aa13.39□□□□□ -0.27
RFFL-208ENST00000581039 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
RFFL-208ENST00000581039 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
RFFL-208ENST00000581039 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
RFFL-208ENST00000581039 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
RFFL-208ENST00000581039 U2SURPO15042 1029 aaKnown RBP13.38□□□□□ -0.27
RFFL-208ENST00000581039 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
RFFL-208ENST00000581039 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
RFFL-208ENST00000581039 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
RFFL-208ENST00000581039 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
RFFL-208ENST00000581039 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
RFFL-208ENST00000581039 BTBD11A6QL63 1104 aa13.36□□□□□ -0.27
RFFL-208ENST00000581039 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
RFFL-208ENST00000581039 NBPF5PQ86XG9 351 aaPredicted RBP13.36□□□□□ -0.27
RFFL-208ENST00000581039 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
RFFL-208ENST00000581039 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms