RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 USP5P45974 858 aa17.83■□□□□ 0.44
ITGB4-206ENST00000579662 GRPEL1Q9HAV7 217 aa17.83■□□□□ 0.44
ITGB4-206ENST00000579662 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.44
ITGB4-206ENST00000579662 TRAPPC8Q9Y2L5 1435 aa17.83■□□□□ 0.44
ITGB4-206ENST00000579662 SMTNL1A8MU46 457 aa17.83■□□□□ 0.44
ITGB4-206ENST00000579662 SNRPA1P09661 255 aaKnown RBP17.83■□□□□ 0.44
ITGB4-206ENST00000579662 ZFYVE27Q5T4F4 411 aa17.83■□□□□ 0.44
ITGB4-206ENST00000579662 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
ITGB4-206ENST00000579662 SLF2Q8IX21 1173 aa17.82■□□□□ 0.44
ITGB4-206ENST00000579662 TTF1Q15361 905 aaPredicted RBP17.82■□□□□ 0.44
ITGB4-206ENST00000579662 ECHDC1Q9NTX5 307 aa17.82■□□□□ 0.44
ITGB4-206ENST00000579662 ARHGEF12Q9NZN5 1544 aa17.82■□□□□ 0.44
ITGB4-206ENST00000579662 BMP2KLQ5H9B9 411 aa17.81■□□□□ 0.44
ITGB4-206ENST00000579662 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
ITGB4-206ENST00000579662 ADAMTS2O95450 1211 aa17.81■□□□□ 0.44
ITGB4-206ENST00000579662 DZIP1Q86YF9 867 aaKnown RBP17.81■□□□□ 0.44
ITGB4-206ENST00000579662 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
ITGB4-206ENST00000579662 CCDC83Q8IWF9 413 aa17.81■□□□□ 0.44
ITGB4-206ENST00000579662 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
ITGB4-206ENST00000579662 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
ITGB4-206ENST00000579662 TTLL5Q6EMB2 1281 aa17.8■□□□□ 0.44
ITGB4-206ENST00000579662 SEC63Q9UGP8 760 aaKnown RBP17.8■□□□□ 0.44
ITGB4-206ENST00000579662 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
ITGB4-206ENST00000579662 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
ITGB4-206ENST00000579662 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
ITGB4-206ENST00000579662 SCAND2PQ9GZW5 306 aaPredicted RBP17.8■□□□□ 0.44
ITGB4-206ENST00000579662 SPC24Q8NBT2 197 aa17.8■□□□□ 0.44
ITGB4-206ENST00000579662 MAP3K11Q16584 847 aa17.8■□□□□ 0.44
ITGB4-206ENST00000579662 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 CDC5LQ99459 802 aaKnown RBP17.79■□□□□ 0.44
ITGB4-206ENST00000579662 UPF3BQ9BZI7 483 aaKnown RBP17.79■□□□□ 0.44
ITGB4-206ENST00000579662 ZHX3Q9H4I2 956 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 ZNF213O14771 459 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 RPGRQ92834 1020 aaKnown RBP17.79■□□□□ 0.44
ITGB4-206ENST00000579662 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 ZFYVE9O95405 1425 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 LIMCH1Q9UPQ0 1083 aa17.79■□□□□ 0.44
ITGB4-206ENST00000579662 ZNF76P36508 570 aa17.78■□□□□ 0.44
ITGB4-206ENST00000579662 NGLY1Q96IV0 654 aa17.78■□□□□ 0.44
ITGB4-206ENST00000579662 TANGO6Q9C0B7 1094 aa17.78■□□□□ 0.44
ITGB4-206ENST00000579662 PPP1R42Q7Z4L9 355 aa17.78■□□□□ 0.44
ITGB4-206ENST00000579662 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
ITGB4-206ENST00000579662 CTCFLQ8NI51 663 aaPredicted RBP17.78■□□□□ 0.44
ITGB4-206ENST00000579662 DEF6Q9H4E7 631 aa17.78■□□□□ 0.44
ITGB4-206ENST00000579662 HDAC1Q13547 482 aaPredicted RBP17.77■□□□□ 0.44
ITGB4-206ENST00000579662 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
ITGB4-206ENST00000579662 MINDY4BA8MYZ0 360 aa17.77■□□□□ 0.44
ITGB4-206ENST00000579662 FAM83GA6ND36 823 aa17.77■□□□□ 0.43
ITGB4-206ENST00000579662 ABCC2Q92887 1545 aa17.77■□□□□ 0.43
ITGB4-206ENST00000579662 PI4KAP2A4QPH2 592 aa17.76■□□□□ 0.43
ITGB4-206ENST00000579662 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
ITGB4-206ENST00000579662 PI4KAP1Q8N8J0 262 aa17.76■□□□□ 0.43
ITGB4-206ENST00000579662 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
ITGB4-206ENST00000579662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.76■□□□□ 0.43
ITGB4-206ENST00000579662 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
ITGB4-206ENST00000579662 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
ITGB4-206ENST00000579662 ABCC1P33527 1531 aa17.76■□□□□ 0.43
ITGB4-206ENST00000579662 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
ITGB4-206ENST00000579662 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
ITGB4-206ENST00000579662 TTC22Q5TAA0 569 aa17.75■□□□□ 0.43
ITGB4-206ENST00000579662 HMG20BQ9P0W2 317 aa17.75■□□□□ 0.43
ITGB4-206ENST00000579662 TRPM2O94759 1503 aa17.75■□□□□ 0.43
ITGB4-206ENST00000579662 FLT4P35916 1363 aa17.75■□□□□ 0.43
ITGB4-206ENST00000579662 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
ITGB4-206ENST00000579662 ALDH1L1O75891 902 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
ITGB4-206ENST00000579662 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 PIK3C2GO75747 1445 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
ITGB4-206ENST00000579662 NPATQ14207 1427 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 LDHCP07864 332 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 UQCRFS1P1P0C7P4 283 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 TNIP1Q15025 636 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
ITGB4-206ENST00000579662 LDHAL6AQ6ZMR3 332 aa17.73■□□□□ 0.43
ITGB4-206ENST00000579662 ZCRB1Q8TBF4 217 aaKnown RBP17.73■□□□□ 0.43
ITGB4-206ENST00000579662 GPTP24298 496 aa17.73■□□□□ 0.43
ITGB4-206ENST00000579662 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
ITGB4-206ENST00000579662 ERLIN2O94905 339 aa17.73■□□□□ 0.43
ITGB4-206ENST00000579662 TBC1D9Q6ZT07 1266 aa17.73■□□□□ 0.43
ITGB4-206ENST00000579662 SSRP1Q08945 709 aaKnown RBP17.73■□□□□ 0.43
ITGB4-206ENST00000579662 UBE3BQ7Z3V4 1068 aa17.73■□□□□ 0.43
ITGB4-206ENST00000579662 SPTY2D1Q68D10 685 aaPredicted RBP17.72■□□□□ 0.43
ITGB4-206ENST00000579662 NUCB1Q02818 461 aa17.72■□□□□ 0.43
ITGB4-206ENST00000579662 GOLGA8AA7E2F4 631 aa17.72■□□□□ 0.43
ITGB4-206ENST00000579662 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
ITGB4-206ENST00000579662 CTAGE5O15320 804 aa17.72■□□□□ 0.43
ITGB4-206ENST00000579662 ANO10Q9NW15 660 aa17.72■□□□□ 0.43
ITGB4-206ENST00000579662 RANBP6O60518 1105 aaKnown RBP17.71■□□□□ 0.43
ITGB4-206ENST00000579662 RAB34Q9BZG1 259 aa17.71■□□□□ 0.43
ITGB4-206ENST00000579662 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.43
ITGB4-206ENST00000579662 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
ITGB4-206ENST00000579662 CATIPQ7Z7H3 387 aa17.71■□□□□ 0.43
ITGB4-206ENST00000579662 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
ITGB4-206ENST00000579662 GOLIM4O00461 696 aa17.71■□□□□ 0.43
ITGB4-206ENST00000579662 IFIT3O14879 490 aaKnown RBP17.71■□□□□ 0.43
ITGB4-206ENST00000579662 PIBF1Q8WXW3 757 aa17.71■□□□□ 0.43
ITGB4-206ENST00000579662 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms