RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-213ENST00000579605 INTS5Q6P9B9 1019 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-213ENST00000579605 NFIXQ14938 502 aa18.34■□□□□ 0.53
CDK5RAP3-213ENST00000579605 CCDC85CA6NKD9 419 aa18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 H0YIN7 160 aa18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 SERPINB2P05120 415 aa18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 MLLT1Q03111 559 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 WBP1LQ9NX94 342 aa18.33■□□□□ 0.52
CDK5RAP3-213ENST00000579605 C21orf2O43822 256 aa18.32■□□□□ 0.52
CDK5RAP3-213ENST00000579605 MTHFSP49914 203 aa18.32■□□□□ 0.52
CDK5RAP3-213ENST00000579605 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-213ENST00000579605 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-213ENST00000579605 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.526e-13■■□□□ 12.3
CDK5RAP3-213ENST00000579605 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-213ENST00000579605 COL5A3P25940 1745 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 TMEM88BA6NKF7 163 aa18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 BICDL1Q6ZP65 573 aa18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 DNAJC10Q8IXB1 793 aa18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 POLKQ9UBT6 870 aa18.3■□□□□ 0.52
CDK5RAP3-213ENST00000579605 PASKQ96RG2 1323 aa18.28■□□□□ 0.52
CDK5RAP3-213ENST00000579605 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
CDK5RAP3-213ENST00000579605 EAPPQ56P03 285 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-213ENST00000579605 C1orf141Q5JVX7 400 aa18.27■□□□□ 0.52
CDK5RAP3-213ENST00000579605 LDHDQ86WU2 507 aa18.27■□□□□ 0.52
CDK5RAP3-213ENST00000579605 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.52
CDK5RAP3-213ENST00000579605 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
CDK5RAP3-213ENST00000579605 TIAM2Q8IVF5 1701 aa18.26■□□□□ 0.51
CDK5RAP3-213ENST00000579605 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-213ENST00000579605 ZNF831Q5JPB2 1677 aa18.26■□□□□ 0.51
CDK5RAP3-213ENST00000579605 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
CDK5RAP3-213ENST00000579605 BCL2L12Q9HB09 334 aa18.26■□□□□ 0.51
CDK5RAP3-213ENST00000579605 CARMIL3Q8ND23 1372 aa18.26■□□□□ 0.51
CDK5RAP3-213ENST00000579605 DEFB115Q30KQ5 88 aa18.25■□□□□ 0.51
CDK5RAP3-213ENST00000579605 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-213ENST00000579605 KIF20BQ96Q89 1820 aa18.24■□□□□ 0.51
CDK5RAP3-213ENST00000579605 IQCA1LA6NCM1 817 aa18.24■□□□□ 0.51
CDK5RAP3-213ENST00000579605 ITGBL1O95965 494 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-213ENST00000579605 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
CDK5RAP3-213ENST00000579605 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
CDK5RAP3-213ENST00000579605 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-213ENST00000579605 MAP2K1Q02750 393 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-213ENST00000579605 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
CDK5RAP3-213ENST00000579605 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-213ENST00000579605 COL15A1P39059 1388 aa18.21■□□□□ 0.51
CDK5RAP3-213ENST00000579605 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
CDK5RAP3-213ENST00000579605 CANXP27824 592 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-213ENST00000579605 RGS19P49795 217 aa18.21■□□□□ 0.51
CDK5RAP3-213ENST00000579605 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
CDK5RAP3-213ENST00000579605 ABT1Q9ULW3 272 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-213ENST00000579605 PDE6BP35913 854 aa18.2■□□□□ 0.5
CDK5RAP3-213ENST00000579605 GRM1Q13255 1194 aa18.2■□□□□ 0.5
CDK5RAP3-213ENST00000579605 SLC39A6Q13433 755 aa18.2■□□□□ 0.5
CDK5RAP3-213ENST00000579605 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
CDK5RAP3-213ENST00000579605 RASSF10A6NK89 507 aa18.19■□□□□ 0.5
CDK5RAP3-213ENST00000579605 MAP1SQ66K74 1059 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-213ENST00000579605 PAXIP1Q6ZW49 1069 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-213ENST00000579605 BRIP1Q9BX63 1249 aa18.19■□□□□ 0.5
CDK5RAP3-213ENST00000579605 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
CDK5RAP3-213ENST00000579605 CNTROBQ8N137 903 aa18.18■□□□□ 0.5
CDK5RAP3-213ENST00000579605 AFDNP55196 1824 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-213ENST00000579605 LTBP3Q9NS15 1303 aa18.18■□□□□ 0.5
CDK5RAP3-213ENST00000579605 TJP1Q07157 1748 aa18.18■□□□□ 0.5
CDK5RAP3-213ENST00000579605 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-213ENST00000579605 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
CDK5RAP3-213ENST00000579605 HACL1Q9UJ83 578 aa18.17■□□□□ 0.5
CDK5RAP3-213ENST00000579605 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
CDK5RAP3-213ENST00000579605 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
CDK5RAP3-213ENST00000579605 NPHP1O15259 732 aa18.16■□□□□ 0.5
CDK5RAP3-213ENST00000579605 EPHX2P34913 555 aa18.16■□□□□ 0.5
CDK5RAP3-213ENST00000579605 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
CDK5RAP3-213ENST00000579605 LGR6Q9HBX8 967 aa18.16■□□□□ 0.5
CDK5RAP3-213ENST00000579605 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
CDK5RAP3-213ENST00000579605 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-213ENST00000579605 CNKSR1Q969H4 720 aa18.15■□□□□ 0.5
CDK5RAP3-213ENST00000579605 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-213ENST00000579605 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
CDK5RAP3-213ENST00000579605 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
CDK5RAP3-213ENST00000579605 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
CDK5RAP3-213ENST00000579605 ZNF541Q9H0D2 1346 aa18.14■□□□□ 0.49
CDK5RAP3-213ENST00000579605 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
CDK5RAP3-213ENST00000579605 DLEC1Q9Y238 1755 aa18.14■□□□□ 0.49
CDK5RAP3-213ENST00000579605 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
CDK5RAP3-213ENST00000579605 ANKRD26Q9UPS8 1709 aa18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 FMR1Q06787 632 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 SOGA3Q5TF21 947 aa18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 CYP4F22Q6NT55 531 aa18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 PNMA8AQ86V59 439 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 GPR101Q96P66 508 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
CDK5RAP3-213ENST00000579605 A0A087WZG4 1122 aa18.11■□□□□ 0.49
CDK5RAP3-213ENST00000579605 VIRMAQ69YN4 1812 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms