RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 DLEC1Q9Y238 1755 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 AKAP4Q5JQC9 854 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
MSI2-208ENST00000579466 KDM2BQ8NHM5 1336 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 MRC1P22897 1456 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
MSI2-208ENST00000579466 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
MSI2-208ENST00000579466 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
MSI2-208ENST00000579466 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
MSI2-208ENST00000579466 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
MSI2-208ENST00000579466 NFIXQ14938 502 aa13.08□□□□□ -0.32
MSI2-208ENST00000579466 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
MSI2-208ENST00000579466 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
MSI2-208ENST00000579466 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
MSI2-208ENST00000579466 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
MSI2-208ENST00000579466 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
MSI2-208ENST00000579466 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
MSI2-208ENST00000579466 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
MSI2-208ENST00000579466 TM4SF1P30408 202 aa13.07□□□□□ -0.32
MSI2-208ENST00000579466 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
MSI2-208ENST00000579466 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
MSI2-208ENST00000579466 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
MSI2-208ENST00000579466 CCER1Q8TC90 406 aaPredicted RBP13.06□□□□□ -0.32
MSI2-208ENST00000579466 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
MSI2-208ENST00000579466 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
MSI2-208ENST00000579466 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
MSI2-208ENST00000579466 SERPINB2P05120 415 aa13.05□□□□□ -0.32
MSI2-208ENST00000579466 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
MSI2-208ENST00000579466 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
MSI2-208ENST00000579466 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
MSI2-208ENST00000579466 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
MSI2-208ENST00000579466 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
MSI2-208ENST00000579466 FSTL1Q12841 308 aa13.04□□□□□ -0.32
MSI2-208ENST00000579466 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
MSI2-208ENST00000579466 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
MSI2-208ENST00000579466 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
MSI2-208ENST00000579466 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
MSI2-208ENST00000579466 PRELPP51888 382 aa13.03□□□□□ -0.32
MSI2-208ENST00000579466 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
MSI2-208ENST00000579466 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
MSI2-208ENST00000579466 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.33
MSI2-208ENST00000579466 CAPN15O75808 1086 aa13.02□□□□□ -0.33
MSI2-208ENST00000579466 LMNB1P20700 586 aa13.02□□□□□ -0.33
MSI2-208ENST00000579466 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
MSI2-208ENST00000579466 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
MSI2-208ENST00000579466 H0YIN7 160 aa13.01□□□□□ -0.33
MSI2-208ENST00000579466 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSI2-208ENST00000579466 NFKBIEO00221 500 aa13□□□□□ -0.33
MSI2-208ENST00000579466 NPHP1O15259 732 aa13□□□□□ -0.33
MSI2-208ENST00000579466 TEFQ10587 303 aa13□□□□□ -0.33
MSI2-208ENST00000579466 COL13A1Q5TAT6 717 aaPredicted RBP13□□□□□ -0.33
MSI2-208ENST00000579466 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
MSI2-208ENST00000579466 TBC1D2BQ9UPU7 963 aa13□□□□□ -0.33
MSI2-208ENST00000579466 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
MSI2-208ENST00000579466 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
MSI2-208ENST00000579466 GLTPD2A6NH11 291 aa12.99□□□□□ -0.33
MSI2-208ENST00000579466 STARD3NLO95772 234 aa12.99□□□□□ -0.33
MSI2-208ENST00000579466 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
MSI2-208ENST00000579466 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
MSI2-208ENST00000579466 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
MSI2-208ENST00000579466 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
MSI2-208ENST00000579466 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
MSI2-208ENST00000579466 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
MSI2-208ENST00000579466 C21orf2O43822 256 aa12.98□□□□□ -0.33
MSI2-208ENST00000579466 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
MSI2-208ENST00000579466 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
MSI2-208ENST00000579466 JMYQ8N9B5 988 aa12.98□□□□□ -0.33
MSI2-208ENST00000579466 A0A087WZG4 1122 aa12.97□□□□□ -0.33
MSI2-208ENST00000579466 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
MSI2-208ENST00000579466 PRR5LQ6MZQ0 368 aa12.97□□□□□ -0.33
MSI2-208ENST00000579466 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
MSI2-208ENST00000579466 SLX4Q8IY92 1834 aa12.97□□□□□ -0.33
MSI2-208ENST00000579466 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
MSI2-208ENST00000579466 A1BGP04217 495 aa12.96□□□□□ -0.33
MSI2-208ENST00000579466 ZNF790Q6PG37 636 aa12.96□□□□□ -0.33
MSI2-208ENST00000579466 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
MSI2-208ENST00000579466 GAS2L2Q8NHY3 880 aa12.96□□□□□ -0.33
MSI2-208ENST00000579466 PCNTO95613 3336 aa12.96□□□□□ -0.34
MSI2-208ENST00000579466 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
MSI2-208ENST00000579466 PER1O15534 1290 aaPredicted RBP12.95□□□□□ -0.34
MSI2-208ENST00000579466 KCNQ3O43525 872 aa12.95□□□□□ -0.34
MSI2-208ENST00000579466 PDE6BP35913 854 aa12.95□□□□□ -0.34
MSI2-208ENST00000579466 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
MSI2-208ENST00000579466 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
MSI2-208ENST00000579466 CNBD1Q8NA66 436 aa12.95□□□□□ -0.34
MSI2-208ENST00000579466 HSPA1AP0DMV8 641 aaKnown RBP12.94□□□□□ -0.34
MSI2-208ENST00000579466 HSPA1BP0DMV9 641 aaKnown RBP12.94□□□□□ -0.34
MSI2-208ENST00000579466 DPY19L2Q6NUT2 758 aa12.94□□□□□ -0.34
MSI2-208ENST00000579466 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
MSI2-208ENST00000579466 BRIP1Q9BX63 1249 aa12.94□□□□□ -0.34
MSI2-208ENST00000579466 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
MSI2-208ENST00000579466 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
MSI2-208ENST00000579466 POTECB2RU33 542 aa12.93□□□□□ -0.34
MSI2-208ENST00000579466 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
MSI2-208ENST00000579466 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
MSI2-208ENST00000579466 ST5P78524 1137 aa12.93□□□□□ -0.34
MSI2-208ENST00000579466 DZIP3Q86Y13 1208 aaKnown RBP12.93□□□□□ -0.34
MSI2-208ENST00000579466 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms