RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 CHRNA5P30532 468 aa26.01■■□□□ 1.75
CDKN2A-213ENST00000579122 VSIG10Q8N0Z9 540 aa26.01■■□□□ 1.75
CDKN2A-213ENST00000579122 NARFQ9UHQ1 456 aa26.01■■□□□ 1.75
CDKN2A-213ENST00000579122 COL15A1P39059 1388 aa25.99■■□□□ 1.75
CDKN2A-213ENST00000579122 VIRMAQ69YN4 1812 aaKnown RBP25.98■■□□□ 1.75
CDKN2A-213ENST00000579122 ZBTB1Q9Y2K1 713 aa25.98■■□□□ 1.75
CDKN2A-213ENST00000579122 NFIXQ14938 502 aa25.97■■□□□ 1.75
CDKN2A-213ENST00000579122 CC2D1BQ5T0F9 858 aaKnown RBP25.97■■□□□ 1.75
CDKN2A-213ENST00000579122 RBM46Q8TBY0 533 aaKnown RBP25.97■■□□□ 1.75
CDKN2A-213ENST00000579122 RNF181Q9P0P0 153 aa25.97■■□□□ 1.75
CDKN2A-213ENST00000579122 KDM2BQ8NHM5 1336 aa25.95■■□□□ 1.75
CDKN2A-213ENST00000579122 NRXN2Q9P2S2 1712 aa25.95■■□□□ 1.74
CDKN2A-213ENST00000579122 BCL2L12Q9HB09 334 aa25.95■■□□□ 1.74
CDKN2A-213ENST00000579122 UBR2Q8IWV8 1755 aa25.95■■□□□ 1.74
CDKN2A-213ENST00000579122 C16orf71Q8IYS4 520 aaPredicted RBP25.94■■□□□ 1.74
CDKN2A-213ENST00000579122 AFDNP55196 1824 aaKnown RBP25.93■■□□□ 1.74
CDKN2A-213ENST00000579122 STARD3NLO95772 234 aa25.92■■□□□ 1.74
CDKN2A-213ENST00000579122 SERPINB2P05120 415 aa25.92■■□□□ 1.74
CDKN2A-213ENST00000579122 TTC5Q8N0Z6 440 aa25.92■■□□□ 1.74
CDKN2A-213ENST00000579122 DNAJC5GQ8N7S2 189 aa25.92■■□□□ 1.74
CDKN2A-213ENST00000579122 NPC1L1Q9UHC9 1359 aa25.92■■□□□ 1.74
CDKN2A-213ENST00000579122 COL3A1P02461 1466 aaPredicted RBP25.91■■□□□ 1.74
CDKN2A-213ENST00000579122 CANXP27824 592 aaKnown RBP25.91■■□□□ 1.74
CDKN2A-213ENST00000579122 FSTL1Q12841 308 aa25.9■■□□□ 1.74
CDKN2A-213ENST00000579122 ZC3H4Q9UPT8 1303 aaKnown RBP25.89■■□□□ 1.74
CDKN2A-213ENST00000579122 SBF1O95248 1867 aa25.89■■□□□ 1.74
CDKN2A-213ENST00000579122 A0A087WZG4 1122 aa25.89■■□□□ 1.74
CDKN2A-213ENST00000579122 EIF5P55010 431 aaKnown RBP25.89■■□□□ 1.74
CDKN2A-213ENST00000579122 DLEC1Q9Y238 1755 aa25.88■■□□□ 1.73
CDKN2A-213ENST00000579122 TEFQ10587 303 aa25.88■■□□□ 1.73
CDKN2A-213ENST00000579122 GAS2L2Q8NHY3 880 aa25.88■■□□□ 1.73
CDKN2A-213ENST00000579122 RRAGCQ9HB90 399 aa25.88■■□□□ 1.73
CDKN2A-213ENST00000579122 TNRC6CQ9HCJ0 1690 aaKnown RBP25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 GNAT3A8MTJ3 354 aa25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 ZNF790Q6PG37 636 aa25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 TTLL6Q8N841 843 aa25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 IL17REQ8NFR9 667 aa25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 TEX13AQ9BXU3 409 aaPredicted RBP25.87■■□□□ 1.73
CDKN2A-213ENST00000579122 HEG1Q9ULI3 1381 aa25.86■■□□□ 1.73
CDKN2A-213ENST00000579122 RASSF7Q02833 373 aa25.86■■□□□ 1.73
CDKN2A-213ENST00000579122 C2CD5Q86YS7 1000 aa25.86■■□□□ 1.73
CDKN2A-213ENST00000579122 ZNF496Q96IT1 587 aaPredicted RBP25.86■■□□□ 1.73
CDKN2A-213ENST00000579122 WDR90Q96KV7 1748 aa25.85■■□□□ 1.73
CDKN2A-213ENST00000579122 H0YIN7 160 aa25.85■■□□□ 1.73
CDKN2A-213ENST00000579122 LMNB1P20700 586 aa25.85■■□□□ 1.73
CDKN2A-213ENST00000579122 CARMIL3Q8ND23 1372 aa25.84■■□□□ 1.73
CDKN2A-213ENST00000579122 BICDL1Q6ZP65 573 aa25.83■■□□□ 1.73
CDKN2A-213ENST00000579122 SIPA1L3O60292 1781 aaPredicted RBP25.82■■□□□ 1.72
CDKN2A-213ENST00000579122 IL6STP40189 918 aaPredicted RBP25.81■■□□□ 1.72
CDKN2A-213ENST00000579122 PRELPP51888 382 aa25.81■■□□□ 1.72
CDKN2A-213ENST00000579122 TBC1D9BQ66K14 1250 aa25.81■■□□□ 1.72
CDKN2A-213ENST00000579122 FMNL2Q96PY5 1086 aa25.81■■□□□ 1.72
CDKN2A-213ENST00000579122 PDZRN3Q9UPQ7 1066 aa25.81■■□□□ 1.72
CDKN2A-213ENST00000579122 CEMIPQ8WUJ3 1361 aa25.81■■□□□ 1.72
CDKN2A-213ENST00000579122 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
CDKN2A-213ENST00000579122 CNGB1Q14028 1251 aaPredicted RBP25.8■■□□□ 1.72
CDKN2A-213ENST00000579122 GLTPD2A6NH11 291 aa25.79■■□□□ 1.72
CDKN2A-213ENST00000579122 SMC1BQ8NDV3 1235 aa25.79■■□□□ 1.72
CDKN2A-213ENST00000579122 BRIP1Q9BX63 1249 aa25.79■■□□□ 1.72
CDKN2A-213ENST00000579122 NFKBIEO00221 500 aa25.78■■□□□ 1.72
CDKN2A-213ENST00000579122 PDE6BP35913 854 aa25.78■■□□□ 1.72
CDKN2A-213ENST00000579122 KLRG1Q96E93 195 aa25.78■■□□□ 1.72
CDKN2A-213ENST00000579122 TBC1D2BQ9UPU7 963 aa25.78■■□□□ 1.72
CDKN2A-213ENST00000579122 ZNF330Q9Y3S2 320 aaPredicted RBP25.78■■□□□ 1.72
CDKN2A-213ENST00000579122 HTRA3P83110 453 aa25.77■■□□□ 1.72
CDKN2A-213ENST00000579122 PRR5LQ6MZQ0 368 aa25.77■■□□□ 1.72
CDKN2A-213ENST00000579122 VEGFAP15692 232 aaPredicted RBP25.76■■□□□ 1.71
CDKN2A-213ENST00000579122 PHACTR3Q96KR7 559 aa25.76■■□□□ 1.71
CDKN2A-213ENST00000579122 CFAP53Q96M91 514 aa25.76■■□□□ 1.71
CDKN2A-213ENST00000579122 ANKRD31Q8N7Z5 1873 aa25.76■■□□□ 1.71
CDKN2A-213ENST00000579122 BTBD11A6QL63 1104 aa25.75■■□□□ 1.71
CDKN2A-213ENST00000579122 A1BGP04217 495 aa25.75■■□□□ 1.71
CDKN2A-213ENST00000579122 NPM2Q86SE8 214 aaKnown RBP25.75■■□□□ 1.71
CDKN2A-213ENST00000579122 ZNF622Q969S3 477 aaKnown RBP eCLIP25.75■■□□□ 1.71
CDKN2A-213ENST00000579122 RSPH6AQ9H0K4 717 aa25.75■■□□□ 1.71
CDKN2A-213ENST00000579122 TIAM2Q8IVF5 1701 aa25.74■■□□□ 1.71
CDKN2A-213ENST00000579122 CAMTA2O94983 1202 aa25.74■■□□□ 1.71
CDKN2A-213ENST00000579122 PRKAR2BP31323 418 aa25.74■■□□□ 1.71
CDKN2A-213ENST00000579122 JMYQ8N9B5 988 aa25.74■■□□□ 1.71
CDKN2A-213ENST00000579122 SETDB2Q96T68 719 aa25.73■■□□□ 1.71
CDKN2A-213ENST00000579122 KCNQ3O43525 872 aa25.72■■□□□ 1.71
CDKN2A-213ENST00000579122 C21orf2O43822 256 aa25.71■■□□□ 1.71
CDKN2A-213ENST00000579122 CCDC24Q8N4L8 307 aa25.71■■□□□ 1.71
CDKN2A-213ENST00000579122 CNBD1Q8NA66 436 aa25.71■■□□□ 1.71
CDKN2A-213ENST00000579122 NUDCQ9Y266 331 aa25.71■■□□□ 1.71
CDKN2A-213ENST00000579122 COL11A2P13942 1736 aaPredicted RBP25.71■■□□□ 1.71
CDKN2A-213ENST00000579122 CCDC88AQ3V6T2 1871 aa25.7■■□□□ 1.7
CDKN2A-213ENST00000579122 PCNTO95613 3336 aa25.69■■□□□ 1.7
CDKN2A-213ENST00000579122 ST5P78524 1137 aa25.69■■□□□ 1.7
CDKN2A-213ENST00000579122 DPY19L2Q6NUT2 758 aa25.69■■□□□ 1.7
CDKN2A-213ENST00000579122 DZIP3Q86Y13 1208 aaKnown RBP25.69■■□□□ 1.7
CDKN2A-213ENST00000579122 LTBP3Q9NS15 1303 aa25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 NPHP1O15259 732 aa25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 STYK1Q6J9G0 422 aa25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 CNKSR1Q969H4 720 aa25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 ZNF219Q9P2Y4 722 aaPredicted RBP25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 USP16Q9Y5T5 823 aa25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 BCORQ6W2J9 1755 aa25.68■■□□□ 1.7
CDKN2A-213ENST00000579122 FER1L6Q2WGJ9 1857 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms