RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 TM4SF1P30408 202 aa12.06□□□□□ -0.48
BRIP1-204ENST00000579028 CABP4P57796 275 aa12.06□□□□□ -0.48
BRIP1-204ENST00000579028 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
BRIP1-204ENST00000579028 VEGFAP15692 232 aaPredicted RBP12.05□□□□□ -0.48
BRIP1-204ENST00000579028 RASSF7Q02833 373 aa12.05□□□□□ -0.48
BRIP1-204ENST00000579028 PLEKHO1Q53GL0 409 aaPredicted RBP12.05□□□□□ -0.48
BRIP1-204ENST00000579028 DLEC1Q9Y238 1755 aa12.05□□□□□ -0.48
BRIP1-204ENST00000579028 NRXN2Q9P2S2 1712 aa12.04□□□□□ -0.48
BRIP1-204ENST00000579028 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
BRIP1-204ENST00000579028 LMNB1P20700 586 aa12.04□□□□□ -0.48
BRIP1-204ENST00000579028 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
BRIP1-204ENST00000579028 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
BRIP1-204ENST00000579028 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
BRIP1-204ENST00000579028 AFDNP55196 1824 aaKnown RBP12.03□□□□□ -0.48
BRIP1-204ENST00000579028 INTS5Q6P9B9 1019 aaKnown RBP12.03□□□□□ -0.48
BRIP1-204ENST00000579028 MTHFSP49914 203 aa12.02□□□□□ -0.49
BRIP1-204ENST00000579028 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.49
BRIP1-204ENST00000579028 SCN11AQ9UI33 1791 aa12.01□□□□□ -0.49
BRIP1-204ENST00000579028 NFATC2IPQ8NCF5 419 aa12.01□□□□□ -0.49
BRIP1-204ENST00000579028 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
BRIP1-204ENST00000579028 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
BRIP1-204ENST00000579028 POTECB2RU33 542 aa12□□□□□ -0.49
BRIP1-204ENST00000579028 ZPR1O75312 459 aa12□□□□□ -0.49
BRIP1-204ENST00000579028 NFIXQ14938 502 aa12□□□□□ -0.49
BRIP1-204ENST00000579028 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
BRIP1-204ENST00000579028 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
BRIP1-204ENST00000579028 NFKBIEO00221 500 aa11.99□□□□□ -0.49
BRIP1-204ENST00000579028 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
BRIP1-204ENST00000579028 TTLL6Q8N841 843 aa11.99□□□□□ -0.49
BRIP1-204ENST00000579028 NARFQ9UHQ1 456 aa11.99□□□□□ -0.49
BRIP1-204ENST00000579028 SERPINB2P05120 415 aa11.98□□□□□ -0.49
BRIP1-204ENST00000579028 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
BRIP1-204ENST00000579028 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
BRIP1-204ENST00000579028 DICER1Q9UPY3 1922 aaKnown RBP11.98□□□□□ -0.49
BRIP1-204ENST00000579028 COL15A1P39059 1388 aa11.97□□□□□ -0.49
BRIP1-204ENST00000579028 CYP19A1P11511 503 aaPredicted RBP11.97□□□□□ -0.49
BRIP1-204ENST00000579028 DPY19L2Q6NUT2 758 aa11.97□□□□□ -0.49
BRIP1-204ENST00000579028 AEBP1Q8IUX7 1158 aa11.97□□□□□ -0.49
BRIP1-204ENST00000579028 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
BRIP1-204ENST00000579028 MRC1P22897 1456 aa11.96□□□□□ -0.49
BRIP1-204ENST00000579028 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.49
BRIP1-204ENST00000579028 C2CD5Q86YS7 1000 aa11.96□□□□□ -0.49
BRIP1-204ENST00000579028 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
BRIP1-204ENST00000579028 H0YIN7 160 aa11.95□□□□□ -0.5
BRIP1-204ENST00000579028 SLC52A2Q9HAB3 445 aa11.95□□□□□ -0.5
BRIP1-204ENST00000579028 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
BRIP1-204ENST00000579028 ZBTB1Q9Y2K1 713 aa11.95□□□□□ -0.5
BRIP1-204ENST00000579028 ANKRD31Q8N7Z5 1873 aa11.95□□□□□ -0.5
BRIP1-204ENST00000579028 LTBP3Q9NS15 1303 aa11.94□□□□□ -0.5
BRIP1-204ENST00000579028 ZBTB22O15209 634 aa11.94□□□□□ -0.5
BRIP1-204ENST00000579028 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
BRIP1-204ENST00000579028 SULT6B1Q6IMI4 303 aa11.94□□□□□ -0.5
BRIP1-204ENST00000579028 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
BRIP1-204ENST00000579028 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
BRIP1-204ENST00000579028 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
BRIP1-204ENST00000579028 FOXN1O15353 648 aa11.93□□□□□ -0.5
BRIP1-204ENST00000579028 ERFEQ4G0M1 354 aa11.93□□□□□ -0.5
BRIP1-204ENST00000579028 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
BRIP1-204ENST00000579028 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
BRIP1-204ENST00000579028 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
BRIP1-204ENST00000579028 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
BRIP1-204ENST00000579028 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
BRIP1-204ENST00000579028 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
BRIP1-204ENST00000579028 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
BRIP1-204ENST00000579028 C21orf2O43822 256 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 SLC34A2O95436 690 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 IL13P35225 146 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
BRIP1-204ENST00000579028 PASKQ96RG2 1323 aa11.9□□□□□ -0.5
BRIP1-204ENST00000579028 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
BRIP1-204ENST00000579028 PDE6BP35913 854 aa11.9□□□□□ -0.5
BRIP1-204ENST00000579028 CTCFP49711 727 aaPredicted RBP11.9□□□□□ -0.5
BRIP1-204ENST00000579028 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
BRIP1-204ENST00000579028 ZNF622Q969S3 477 aaKnown RBP eCLIP11.9□□□□□ -0.5
BRIP1-204ENST00000579028 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
BRIP1-204ENST00000579028 TAOK3Q9H2K8 898 aa11.9□□□□□ -0.5
BRIP1-204ENST00000579028 PCNTO95613 3336 aa11.9□□□□□ -0.5
BRIP1-204ENST00000579028 SCN4AP35499 1836 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 A0A087WZG4 1122 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
BRIP1-204ENST00000579028 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 LDHDQ86WU2 507 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 PANK3Q9H999 370 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 ARFGEF2Q9Y6D5 1785 aa11.89□□□□□ -0.51
BRIP1-204ENST00000579028 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
BRIP1-204ENST00000579028 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
BRIP1-204ENST00000579028 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
BRIP1-204ENST00000579028 AIDAQ96BJ3 306 aa11.88□□□□□ -0.51
BRIP1-204ENST00000579028 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
BRIP1-204ENST00000579028 TMEM88BA6NKF7 163 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 STARD3NLO95772 234 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 VEGFBP49765 207 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 SOGA3Q5TF21 947 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 STYK1Q6J9G0 422 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms