RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
CUEDC1-208ENST00000578357 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
CUEDC1-208ENST00000578357 H0YIN7 160 aa13.6□□□□□ -0.23
CUEDC1-208ENST00000578357 SERPINB2P05120 415 aa13.6□□□□□ -0.23
CUEDC1-208ENST00000578357 IL13P35225 146 aa13.6□□□□□ -0.23
CUEDC1-208ENST00000578357 LGR6Q9HBX8 967 aa13.6□□□□□ -0.23
CUEDC1-208ENST00000578357 KNSTRNQ9Y448 316 aa13.6□□□□□ -0.23
CUEDC1-208ENST00000578357 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
CUEDC1-208ENST00000578357 DPY19L2Q6NUT2 758 aa13.59□□□□□ -0.23
CUEDC1-208ENST00000578357 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
CUEDC1-208ENST00000578357 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
CUEDC1-208ENST00000578357 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
CUEDC1-208ENST00000578357 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
CUEDC1-208ENST00000578357 RASSF7Q02833 373 aa13.58□□□□□ -0.24
CUEDC1-208ENST00000578357 C2CD5Q86YS7 1000 aa13.58□□□□□ -0.24
CUEDC1-208ENST00000578357 BRCA1P38398 1863 aaKnown RBP13.58□□□□□ -0.24
CUEDC1-208ENST00000578357 PCNTO95613 3336 aa13.57□□□□□ -0.24
CUEDC1-208ENST00000578357 WDR90Q96KV7 1748 aa13.57□□□□□ -0.24
CUEDC1-208ENST00000578357 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
CUEDC1-208ENST00000578357 A0A087WZG4 1122 aa13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 CAPN15O75808 1086 aa13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 STARD3NLO95772 234 aa13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 CANXP27824 592 aaKnown RBP13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 ZBTB1Q9Y2K1 713 aa13.56□□□□□ -0.24
CUEDC1-208ENST00000578357 COL15A1P39059 1388 aa13.55□□□□□ -0.24
CUEDC1-208ENST00000578357 HMOX1P09601 288 aa13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 PDE6BP35913 854 aa13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 PRELPP51888 382 aa13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 TTC5Q8N0Z6 440 aa13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
CUEDC1-208ENST00000578357 NFKBIEO00221 500 aa13.53□□□□□ -0.24
CUEDC1-208ENST00000578357 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
CUEDC1-208ENST00000578357 TEX13AQ9BXU3 409 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-208ENST00000578357 POTECB2RU33 542 aa13.52□□□□□ -0.25
CUEDC1-208ENST00000578357 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
CUEDC1-208ENST00000578357 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
CUEDC1-208ENST00000578357 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.25
CUEDC1-208ENST00000578357 TJP1Q07157 1748 aa13.52□□□□□ -0.25
CUEDC1-208ENST00000578357 SBF1O95248 1867 aa13.52□□□□□ -0.25
CUEDC1-208ENST00000578357 C21orf2O43822 256 aa13.51□□□□□ -0.25
CUEDC1-208ENST00000578357 DIAPH1O60610 1272 aaKnown RBP13.51□□□□□ -0.25
CUEDC1-208ENST00000578357 HSPA1AP0DMV8 641 aaKnown RBP13.51□□□□□ -0.25
CUEDC1-208ENST00000578357 HSPA1BP0DMV9 641 aaKnown RBP13.51□□□□□ -0.25
CUEDC1-208ENST00000578357 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
CUEDC1-208ENST00000578357 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
CUEDC1-208ENST00000578357 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
CUEDC1-208ENST00000578357 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
CUEDC1-208ENST00000578357 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
CUEDC1-208ENST00000578357 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 NPHP1O15259 732 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 TEFQ10587 303 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 CNKSR1Q969H4 720 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
CUEDC1-208ENST00000578357 IL6STP40189 918 aaPredicted RBP13.48□□□□□ -0.25
CUEDC1-208ENST00000578357 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
CUEDC1-208ENST00000578357 PRR5LQ6MZQ0 368 aa13.48□□□□□ -0.25
CUEDC1-208ENST00000578357 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
CUEDC1-208ENST00000578357 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
CUEDC1-208ENST00000578357 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
CUEDC1-208ENST00000578357 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 STYK1Q6J9G0 422 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 MRC1P22897 1456 aa13.47□□□□□ -0.25
CUEDC1-208ENST00000578357 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.25
CUEDC1-208ENST00000578357 ST5P78524 1137 aa13.46□□□□□ -0.25
CUEDC1-208ENST00000578357 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
CUEDC1-208ENST00000578357 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
CUEDC1-208ENST00000578357 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.25
CUEDC1-208ENST00000578357 NRXN2Q9P2S2 1712 aa13.46□□□□□ -0.25
CUEDC1-208ENST00000578357 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.26
CUEDC1-208ENST00000578357 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
CUEDC1-208ENST00000578357 IQCA1LA6NCM1 817 aa13.45□□□□□ -0.26
CUEDC1-208ENST00000578357 A1BGP04217 495 aa13.45□□□□□ -0.26
CUEDC1-208ENST00000578357 SRGNP10124 158 aa13.45□□□□□ -0.26
CUEDC1-208ENST00000578357 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
CUEDC1-208ENST00000578357 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
CUEDC1-208ENST00000578357 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
CUEDC1-208ENST00000578357 CC2D1BQ5T0F9 858 aaKnown RBP13.44□□□□□ -0.26
CUEDC1-208ENST00000578357 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
CUEDC1-208ENST00000578357 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
CUEDC1-208ENST00000578357 PRPF40BQ6NWY9 871 aaKnown RBP13.43□□□□□ -0.26
CUEDC1-208ENST00000578357 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
CUEDC1-208ENST00000578357 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
CUEDC1-208ENST00000578357 BTBD11A6QL63 1104 aa13.42□□□□□ -0.26
CUEDC1-208ENST00000578357 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
CUEDC1-208ENST00000578357 DLEC1Q9Y238 1755 aa13.42□□□□□ -0.26
CUEDC1-208ENST00000578357 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
CUEDC1-208ENST00000578357 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms