RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PXDNLA1KZ92 1463 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 CEMIPQ8WUJ3 1361 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 TEFQ10587 303 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
CCDC57-211ENST00000578187 GPBP1L1Q9HC44 474 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-211ENST00000578187 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
CCDC57-211ENST00000578187 KCPQ6ZWJ8 1503 aa16.94■□□□□ 0.3
CCDC57-211ENST00000578187 N4BP2Q86UW6 1770 aaPredicted RBP16.94■□□□□ 0.3
CCDC57-211ENST00000578187 INTS5Q6P9B9 1019 aaKnown RBP16.93■□□□□ 0.3
CCDC57-211ENST00000578187 BCS1LQ9Y276 419 aa16.93■□□□□ 0.3
CCDC57-211ENST00000578187 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
CCDC57-211ENST00000578187 STARD3NLO95772 234 aa16.92■□□□□ 0.3
CCDC57-211ENST00000578187 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
CCDC57-211ENST00000578187 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
CCDC57-211ENST00000578187 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
CCDC57-211ENST00000578187 SRP68Q9UHB9 627 aaKnown RBP16.92■□□□□ 0.3
CCDC57-211ENST00000578187 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
CCDC57-211ENST00000578187 COL15A1P39059 1388 aa16.91■□□□□ 0.3
CCDC57-211ENST00000578187 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
CCDC57-211ENST00000578187 ZBTB22O15209 634 aa16.91■□□□□ 0.3
CCDC57-211ENST00000578187 FKBP8Q14318 412 aa16.91■□□□□ 0.3
CCDC57-211ENST00000578187 ADCY9O60503 1353 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 KDM3BQ7LBC6 1761 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 ANP32CO43423 234 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 NEFMP07197 916 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 DPEP1P16444 411 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC57-211ENST00000578187 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
CCDC57-211ENST00000578187 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
CCDC57-211ENST00000578187 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
CCDC57-211ENST00000578187 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
CCDC57-211ENST00000578187 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
CCDC57-211ENST00000578187 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
CCDC57-211ENST00000578187 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
CCDC57-211ENST00000578187 A0A087WZG4 1122 aa16.88■□□□□ 0.29
CCDC57-211ENST00000578187 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
CCDC57-211ENST00000578187 ZNF790Q6PG37 636 aa16.88■□□□□ 0.29
CCDC57-211ENST00000578187 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
CCDC57-211ENST00000578187 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
CCDC57-211ENST00000578187 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
CCDC57-211ENST00000578187 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
CCDC57-211ENST00000578187 DDR1Q08345 913 aa16.87■□□□□ 0.29
CCDC57-211ENST00000578187 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
CCDC57-211ENST00000578187 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
CCDC57-211ENST00000578187 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
CCDC57-211ENST00000578187 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
CCDC57-211ENST00000578187 TM4SF1P30408 202 aa16.86■□□□□ 0.29
CCDC57-211ENST00000578187 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
CCDC57-211ENST00000578187 ADAMTS8Q9UP79 889 aa16.86■□□□□ 0.29
CCDC57-211ENST00000578187 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
CCDC57-211ENST00000578187 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
CCDC57-211ENST00000578187 MCM10Q7L590 875 aa16.85■□□□□ 0.29
CCDC57-211ENST00000578187 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
CCDC57-211ENST00000578187 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
CCDC57-211ENST00000578187 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-211ENST00000578187 ZNF330Q9Y3S2 320 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-211ENST00000578187 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
CCDC57-211ENST00000578187 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
CCDC57-211ENST00000578187 NFIXQ14938 502 aa16.83■□□□□ 0.28
CCDC57-211ENST00000578187 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
CCDC57-211ENST00000578187 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
CCDC57-211ENST00000578187 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
CCDC57-211ENST00000578187 KCNA3P22001 575 aa16.82■□□□□ 0.28
CCDC57-211ENST00000578187 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
CCDC57-211ENST00000578187 SERPINB2P05120 415 aa16.81■□□□□ 0.28
CCDC57-211ENST00000578187 CHRNA5P30532 468 aa16.81■□□□□ 0.28
CCDC57-211ENST00000578187 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
CCDC57-211ENST00000578187 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
CCDC57-211ENST00000578187 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
CCDC57-211ENST00000578187 AFDNP55196 1824 aaKnown RBP16.8■□□□□ 0.28
CCDC57-211ENST00000578187 NRXN2Q9P2S2 1712 aa16.8■□□□□ 0.28
CCDC57-211ENST00000578187 NPHP1O15259 732 aa16.8■□□□□ 0.28
CCDC57-211ENST00000578187 RIPK4P57078 832 aa16.8■□□□□ 0.28
CCDC57-211ENST00000578187 SCN7AQ01118 1682 aa16.8■□□□□ 0.28
CCDC57-211ENST00000578187 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
CCDC57-211ENST00000578187 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
CCDC57-211ENST00000578187 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
CCDC57-211ENST00000578187 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
CCDC57-211ENST00000578187 H0YIN7 160 aa16.78■□□□□ 0.28
CCDC57-211ENST00000578187 C9orf131Q5VYM1 1079 aa16.78■□□□□ 0.28
CCDC57-211ENST00000578187 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
CCDC57-211ENST00000578187 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
CCDC57-211ENST00000578187 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
CCDC57-211ENST00000578187 DLEC1Q9Y238 1755 aa16.77■□□□□ 0.28
CCDC57-211ENST00000578187 KCNQ3O43525 872 aa16.77■□□□□ 0.28
CCDC57-211ENST00000578187 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
CCDC57-211ENST00000578187 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-211ENST00000578187 C2CD5Q86YS7 1000 aa16.77■□□□□ 0.28
CCDC57-211ENST00000578187 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
CCDC57-211ENST00000578187 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
CCDC57-211ENST00000578187 KDM2BQ8NHM5 1336 aa16.76■□□□□ 0.27
CCDC57-211ENST00000578187 PDE6BP35913 854 aa16.76■□□□□ 0.27
CCDC57-211ENST00000578187 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-211ENST00000578187 TTLL6Q8N841 843 aa16.76■□□□□ 0.27
CCDC57-211ENST00000578187 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
CCDC57-211ENST00000578187 RNF181Q9P0P0 153 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms