RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 CEBPZQ03701 1054 aaKnown RBP5.57□□□□□ -1.52
NF1-218ENST00000577967 CHAF1AQ13111 956 aaPredicted RBP5.57□□□□□ -1.52
NF1-218ENST00000577967 PHAXQ9H814 394 aaKnown RBP5.57□□□□□ -1.52
NF1-218ENST00000577967 LGR6Q9HBX8 967 aa5.57□□□□□ -1.52
NF1-218ENST00000577967 RAI14Q9P0K7 980 aa5.57□□□□□ -1.52
NF1-218ENST00000577967 ADGRB3O60242 1522 aa5.57□□□□□ -1.52
NF1-218ENST00000577967 SF3B2Q13435 895 aaKnown RBP5.57□□□□□ -1.52
NF1-218ENST00000577967 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 KIAA2012Q0VF49 1180 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 PRPF40BQ6NWY9 871 aaKnown RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 CPLX2Q6PUV4 134 aaKnown RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 BTG4Q9NY30 223 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 ARHGEF10O15013 1369 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 IDH1O75874 414 aaKnown RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 COPS6Q7L5N1 327 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 G2E3Q7L622 706 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 ZNF652Q9Y2D9 606 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 TTC22Q5TAA0 569 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 UBE3BQ7Z3V4 1068 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 ARHGAP45Q92619 1136 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 LARP6Q9BRS8 491 aaKnown RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 KIDINS220Q9ULH0 1771 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 A2ML1A8K2U0 1454 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 IFIT5Q13325 482 aaKnown RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 TPD52L1Q16890 204 aaPredicted RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 NBPF6Q5VWK0 638 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 TBC1D9Q6ZT07 1266 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 ANKRD13DQ6ZTN6 518 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 NBPF4Q96M43 638 aa5.56□□□□□ -1.52
NF1-218ENST00000577967 CTDP1Q9Y5B0 961 aaPredicted RBP5.56□□□□□ -1.52
NF1-218ENST00000577967 ANKRD18BA2A2Z9 1011 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 IFIT1P09914 478 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 HDAC1Q13547 482 aaPredicted RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 NCBP3Q53F19 620 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 ZSCAN25Q6NSZ9 544 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 ATP7BP35670 1465 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 PCDH11XQ9BZA7 1347 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 PCDH11YQ9BZA8 1340 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 CCDC69A6NI79 296 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 RBM5P52756 815 aaKnown RBP eCLIP5.55□□□□□ -1.52
NF1-218ENST00000577967 CWF19L2Q2TBE0 894 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 LRP2BPQ9P2M1 347 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 AKAP2Q9Y2D5 859 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 MROH2AA6NES4 1674 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 PES1O00541 588 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 TRAK2O60296 914 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 TOM1O60784 492 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 PA2G4Q9UQ80 394 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 SLC3A2P08195 630 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 CAVIN1Q6NZI2 390 aaKnown RBP5.55□□□□□ -1.52
NF1-218ENST00000577967 NUP133Q8WUM0 1156 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 SIRT1Q96EB6 747 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 PLEKHF1Q96S99 279 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 ANKIB1Q9P2G1 1089 aa5.55□□□□□ -1.52
NF1-218ENST00000577967 PIK3C2BO00750 1634 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 PLEKHG3A1L390 1219 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 GOLGA6L19H0YKK7 550 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
NF1-218ENST00000577967 TDO2P48775 406 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 HSP90AB3PQ58FF7 597 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 CCDC34Q96HJ3 373 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 ZNF219Q9P2Y4 722 aaPredicted RBP5.54□□□□□ -1.52
NF1-218ENST00000577967 SART3Q15020 963 aaKnown RBP5.54□□□□□ -1.52
NF1-218ENST00000577967 KSR2Q6VAB6 950 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 AK7Q96M32 723 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 TEX13AQ9BXU3 409 aaPredicted RBP5.54□□□□□ -1.52
NF1-218ENST00000577967 SLC5A1P13866 664 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 MCM2P49736 904 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 ATP8B2P98198 1209 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 SAFBQ15424 915 aaKnown RBP eCLIP5.54□□□□□ -1.52
NF1-218ENST00000577967 AIDAQ96BJ3 306 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 ZC3H13Q5T200 1668 aaKnown RBP5.54□□□□□ -1.52
NF1-218ENST00000577967 GOLIM4O00461 696 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 ATP2B2Q01814 1243 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 DDB1Q16531 1140 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 CEP85Q6P2H3 762 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 ARID3AQ99856 593 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 ABCF2Q9UG63 623 aa5.54□□□□□ -1.52
NF1-218ENST00000577967 BLOC1S2Q6QNY1 142 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 SASS6Q6UVJ0 657 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 PIBF1Q8WXW3 757 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 NACAP1Q9BZK3 213 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 PRR36Q9H6K5 1346 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 BECN2A8MW95 431 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 ANKRD1Q15327 319 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 SLC4A8Q2Y0W8 1093 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 DCAF5Q96JK2 942 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 SNRKQ9NRH2 765 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 USP19O94966 1318 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 FIBPO43427 364 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 ATP2B1P20020 1258 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 CCDC83Q8IWF9 413 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 ANKRD44Q8N8A2 993 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 RHPN1Q8TCX5 695 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 RPGRQ92834 1020 aaKnown RBP5.53□□□□□ -1.52
NF1-218ENST00000577967 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 BICC1Q9H694 974 aaKnown RBP5.53□□□□□ -1.52
NF1-218ENST00000577967 CWC22Q9HCG8 908 aaKnown RBP5.53□□□□□ -1.52
NF1-218ENST00000577967 BRMS1Q9HCU9 246 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 LMTK2Q8IWU2 1503 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms