RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
PTPRM-205ENST00000577827 ZFYVE9O95405 1425 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 TTC39AQ5SRH9 613 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 KRT222Q8N1A0 295 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 NAP1L1P55209 391 aaKnown RBP12.13□□□□□ -0.47
PTPRM-205ENST00000577827 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
PTPRM-205ENST00000577827 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 CCDC150Q8NCX0 1101 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
PTPRM-205ENST00000577827 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
PTPRM-205ENST00000577827 GIMAP6Q6P9H5 292 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 MEIS3Q99687 375 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 MIS18AQ9NYP9 233 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
PTPRM-205ENST00000577827 ADAMTS12P58397 1594 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 F13A1P00488 732 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 FAM69CQ0P6D2 419 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 TTLL5Q6EMB2 1281 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
PTPRM-205ENST00000577827 FEZ1Q99689 392 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 STIM1Q13586 685 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 IDI1Q13907 227 aa12.12□□□□□ -0.47
PTPRM-205ENST00000577827 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
PTPRM-205ENST00000577827 RDXP35241 583 aaKnown RBP12.12□□□□□ -0.47
PTPRM-205ENST00000577827 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
PTPRM-205ENST00000577827 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
PTPRM-205ENST00000577827 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 LUC7LQ9NQ29 371 aaKnown RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 PPP1R9BQ96SB3 815 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 MYO6Q9UM54 1294 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 FANCAO15360 1455 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 FSD2A1L4K1 749 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 RHPN1Q8TCX5 695 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 ZHX1Q9UKY1 873 aaPredicted RBP12.11□□□□□ -0.47
PTPRM-205ENST00000577827 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
PTPRM-205ENST00000577827 TATP17735 454 aaPredicted RBP12.1□□□□□ -0.47
PTPRM-205ENST00000577827 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 KDM5CP41229 1560 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 MCM3P25205 808 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
PTPRM-205ENST00000577827 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 TTC12Q9H892 705 aaPredicted RBP12.1□□□□□ -0.47
PTPRM-205ENST00000577827 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
PTPRM-205ENST00000577827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTPRM-205ENST00000577827 KDM4AO75164 1064 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 PPP1R42Q7Z4L9 355 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 C8orf58Q8NAV2 365 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 C8orf76Q96K31 380 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
PTPRM-205ENST00000577827 KIAA0754O94854 1291 aa12.09□□□□□ -0.47
PTPRM-205ENST00000577827 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
PTPRM-205ENST00000577827 TFIP11Q9UBB9 837 aaKnown RBP12.09□□□□□ -0.47
PTPRM-205ENST00000577827 CASQ1P31415 396 aa12.09□□□□□ -0.47
PTPRM-205ENST00000577827 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
PTPRM-205ENST00000577827 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
PTPRM-205ENST00000577827 KIF5CO60282 957 aa12.09□□□□□ -0.47
PTPRM-205ENST00000577827 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
PTPRM-205ENST00000577827 ZNF830Q96NB3 372 aaPredicted RBP12.09□□□□□ -0.47
PTPRM-205ENST00000577827 TMX4Q9H1E5 349 aaPredicted RBP12.09□□□□□ -0.47
PTPRM-205ENST00000577827 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
PTPRM-205ENST00000577827 FAM83GA6ND36 823 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC148Q8NFR7 591 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 EVA1CP58658 441 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 CYB5RLQ6IPT4 315 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC57Q2TAC2 916 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 TIGD1Q96MW7 591 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
PTPRM-205ENST00000577827 DEF6Q9H4E7 631 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
PTPRM-205ENST00000577827 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
PTPRM-205ENST00000577827 KCNH5Q8NCM2 988 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 LMBRD1Q9NUN5 540 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms